Stefan Wilkening

Stefan Wilkening

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Stefan Wilkening

Stefan Wilkening

Publications by authors named "Stefan Wilkening"

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26Publications

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AAVvector-mediated in vivo reprogramming into pluripotency.

Nat Commun 2018 07 9;9(1):2651. Epub 2018 Jul 9.

Virus-Host Interaction Group, Department of Infectious Diseases/Virology, Heidelberg University Hospital, Cluster of Excellence CellNetworks, Heidelberg, 69120, Germany.

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http://www.nature.com/articles/s41467-018-05059-x
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http://dx.doi.org/10.1038/s41467-018-05059-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037684PMC
July 2018

GENE-IS: Time-Efficient and Accurate Analysis of Viral Integration Events in Large-Scale Gene Therapy Data.

Mol Ther Nucleic Acids 2017 Mar 10;6:133-139. Epub 2016 Dec 10.

Department of Translational Oncology, National Center for Tumor Diseases (NCT) and German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.omtn.2016.12.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5363413PMC
March 2017

Genome-Wide Identification of Alternative Polyadenylation Events Using 3'T-Fill.

Methods Mol Biol 2016 ;1358:295-302

Genome Biology Unit, EMBL Heidelberg, Heidelberg, Germany.

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http://dx.doi.org/10.1007/978-1-4939-3067-8_18DOI Listing
July 2016

Candidate genetic modifiers for breast and ovarian cancer risk in BRCA1 and BRCA2 mutation carriers.

Authors:
Paolo Peterlongo Jenny Chang-Claude Kirsten B Moysich Anja Rudolph Rita K Schmutzler Jacques Simard Penny Soucy Rosalind A Eeles Douglas F Easton Ute Hamann Stefan Wilkening Bowang Chen Matti A Rookus Marjanka K Schmidt Frederieke H van der Baan Amanda B Spurdle Logan C Walker Felicity Lose Ana-Teresa Maia Marco Montagna Laura Matricardi Jan Lubinski Anna Jakubowska Encarna B Gómez Garcia Olufunmilayo I Olopade Robert L Nussbaum Katherine L Nathanson Susan M Domchek Timothy R Rebbeck Banu K Arun Beth Y Karlan Sandra Orsulic Jenny Lester Wendy K Chung Alex Miron Melissa C Southey David E Goldgar Saundra S Buys Ramunas Janavicius Cecilia M Dorfling Elizabeth J van Rensburg Yuan Chun Ding Susan L Neuhausen Thomas V O Hansen Anne-Marie Gerdes Bent Ejlertsen Lars Jønson Ana Osorio Cristina Martínez-Bouzas Javier Benitez Edye E Conway Kathleen R Blazer Jeffrey N Weitzel Siranoush Manoukian Bernard Peissel Daniela Zaffaroni Giulietta Scuvera Monica Barile Filomena Ficarazzi Frederique Mariette Stefano Fortuzzi Alessandra Viel Giuseppe Giannini Laura Papi Aline Martayan Maria Grazia Tibiletti Paolo Radice Athanassios Vratimos Florentia Fostira Judy E Garber Alan Donaldson Carole Brewer Claire Foo D Gareth R Evans Debra Frost Diana Eccles Angela Brady Jackie Cook Marc Tischkowitz Julian Adlard Julian Barwell Lisa Walker Louise Izatt Lucy E Side M John Kennedy Mark T Rogers Mary E Porteous Patrick J Morrison Radka Platte Rosemarie Davidson Shirley V Hodgson Steve Ellis Trevor Cole Andrew K Godwin Kathleen Claes Tom Van Maerken Alfons Meindl Andrea Gehrig Christian Sutter Christoph Engel Dieter Niederacher Doris Steinemann Hansjoerg Plendl Karin Kast Kerstin Rhiem Nina Ditsch Norbert Arnold Raymonda Varon-Mateeva Barbara Wappenschmidt Shan Wang-Gohrke Brigitte Bressac-de Paillerets Bruno Buecher Capucine Delnatte Claude Houdayer Dominique Stoppa-Lyonnet Francesca Damiola Isabelle Coupier Laure Barjhoux Laurence Venat-Bouvet Lisa Golmard Nadia Boutry-Kryza Olga M Sinilnikova Olivier Caron Pascal Pujol Sylvie Mazoyer Muriel Belotti Marion Piedmonte Michael L Friedlander Gustavo C Rodriguez Larry J Copeland Miguel de la Hoya Pedro Perez Segura Heli Nevanlinna Kristiina Aittomäki Theo A M van Os Hanne E J Meijers-Heijboer Annemarie H van der Hout Maaike P G Vreeswijk Nicoline Hoogerbrugge Margreet G E M Ausems Helena C van Doorn J Margriet Collée Edith Olah Orland Diez Ignacio Blanco Conxi Lazaro Joan Brunet Lidia Feliubadalo Cezary Cybulski Jacek Gronwald Katarzyna Durda Katarzyna Jaworska-Bieniek Grzegorz Sukiennicki Adalgeir Arason Jocelyne Chiquette Manuel R Teixeira Curtis Olswold Fergus J Couch Noralane M Lindor Xianshu Wang Csilla I Szabo Kenneth Offit Marina Corines Lauren Jacobs Mark E Robson Liying Zhang Vijai Joseph Andreas Berger Christian F Singer Christine Rappaport Daphne Geschwantler Kaulich Georg Pfeiler Muy-Kheng M Tea Catherine M Phelan Mark H Greene Phuong L Mai Gad Rennert Anna Marie Mulligan Gord Glendon Sandrine Tchatchou Irene L Andrulis Amanda Ewart Toland Anders Bojesen Inge Sokilde Pedersen Mads Thomassen Uffe Birk Jensen Yael Laitman Johanna Rantala Anna von Wachenfeldt Hans Ehrencrona Marie Stenmark Askmalm Åke Borg Karoline B Kuchenbaecker Lesley McGuffog Daniel Barrowdale Sue Healey Andrew Lee Paul D P Pharoah Georgia Chenevix-Trench Antonis C Antoniou Eitan Friedman

Cancer Epidemiol Biomarkers Prev 2015 Jan 21;24(1):308-16. Epub 2014 Oct 21.

Sheba Medical Center, Tel Aviv, Israel.

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http://dx.doi.org/10.1158/1055-9965.EPI-14-0532DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4294951PMC
January 2015

Negative feedback buffers effects of regulatory variants.

Mol Syst Biol 2015 Jan 29;11(1):785. Epub 2015 Jan 29.

Computational Genomics, Gene Center, Ludwig Maximilians University, Munich, Germany

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4332157PMC
http://dx.doi.org/10.15252/msb.20145844DOI Listing
January 2015

Genotyping 1000 yeast strains by next-generation sequencing.

BMC Genomics 2013 Feb 9;14:90. Epub 2013 Feb 9.

Genome Biology Unit, European Molecular Biology Laboratory, Meyerhofstr. 1, 69117, Heidelberg, Germany.

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http://dx.doi.org/10.1186/1471-2164-14-90DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3575377PMC
February 2013

Genome-wide polyadenylation site mapping.

Methods Enzymol 2012 ;513:271-96

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

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http://dx.doi.org/10.1016/B978-0-12-391938-0.00012-4DOI Listing
December 2012

SNP_tools: A compact tool package for analysis and conversion of genotype data for MS-Excel.

BMC Res Notes 2009 Oct 23;2:214. Epub 2009 Oct 23.

Department of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.

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http://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0
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http://dx.doi.org/10.1186/1756-0500-2-214DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2771038PMC
October 2009

Is there still a need for candidate gene approaches in the era of genome-wide association studies?

Genomics 2009 May 20;93(5):415-9. Epub 2009 Jan 20.

German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1016/j.ygeno.2008.12.011DOI Listing
May 2009

Interleukin promoter polymorphisms and prognosis in colorectal cancer.

Carcinogenesis 2008 Jun 30;29(6):1202-6. Epub 2008 Apr 30.

Division of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

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http://carcin.oxfordjournals.org/content/early/2008/04/30/ca
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http://www.carcin.oxfordjournals.org/cgi/doi/10.1093/carcin/
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http://dx.doi.org/10.1093/carcin/bgn101DOI Listing
June 2008

MDM2 SNP309 and cancer risk: a combined analysis.

Carcinogenesis 2007 Nov 7;28(11):2262-7. Epub 2007 Sep 7.

Department of Molecular Genetic Epidemiology, German Cancer Research Center, Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1093/carcin/bgm191DOI Listing
November 2007

Allelotyping of pooled DNA with 250 K SNP microarrays.

BMC Genomics 2007 Mar 16;8:77. Epub 2007 Mar 16.

Department of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1186/1471-2164-8-77DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1839100PMC
March 2007

STR markers for kinship analysis.

Hum Biol 2006 Feb;78(1):1-8

Department of Molecular Genetic Epidemiology, German Cancer Research Center (DKFZ), Heidelberg.

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http://dx.doi.org/10.1353/hub.2006.0030DOI Listing
February 2006

The single nucleotide polymorphism IVS1+309 in mouse double minute 2 does not affect risk of familial breast cancer.

Cancer Res 2006 Jan;66(2):646-8

Department of Molecular Genetic Epidemiology, German Cancer Research Center (Deutsches Krebsforschungszentrum), Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1158/0008-5472.CAN-05-3168DOI Listing
January 2006

Determination of allele frequency in pooled DNA: comparison of three PCR-based methods.

Biotechniques 2005 Dec;39(6):853-8

German Cancer Research Center, Molecular Genetic Epidemiology, Heidelberg, Germany.

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http://dx.doi.org/10.2144/000112027DOI Listing
December 2005

Polyglutamine repeat length in the NCOA3 does not affect risk in familial breast cancer.

Cancer Epidemiol Biomarkers Prev 2005 Jan;14(1):291-2

Department of Molecular Genetic Epidemiology, German Cancer Research Center, Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

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January 2005

Differential regulation of CYP3A4 and CYP3A7 by dimethylsulfoxide in primary human hepatocytes.

Basic Clin Pharmacol Toxicol 2004 Aug;95(2):92-3

German Research Centre for Biotechnology, Mascheroder Weg 1, 38124 Braunschweig, Germany.

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http://doi.wiley.com/10.1111/j.1742-7843.2004.950209.x
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http://dx.doi.org/10.1111/j.1742-7843.2004.950209.xDOI Listing
August 2004

Quantitative real-time polymerase chain reaction: methodical analysis and mathematical model.

J Biomol Tech 2004 Jun;15(2):107-11

German Research Centre for Biotechnology, Braunschweig, Germany.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2291683PMC
June 2004

Influence of culture time on the expression of drug-metabolizing enzymes in primary human hepatocytes and hepatoma cell line HepG2.

J Biochem Mol Toxicol 2003 ;17(4):207-13

German Research Centre for Biotechnology, Mascheroder Weg 1, 38124 Braunschweig, Germany.

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http://doi.wiley.com/10.1002/jbt.10085
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http://dx.doi.org/10.1002/jbt.10085DOI Listing
March 2004

Comparison of primary human hepatocytes and hepatoma cell line Hepg2 with regard to their biotransformation properties.

Drug Metab Dispos 2003 Aug;31(8):1035-42

German Research Centre for Biotechnology, Organ-und Gewebekultur, Braunschweig, Germany.

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http://dx.doi.org/10.1124/dmd.31.8.1035DOI Listing
August 2003