Publications by authors named "Stefan Taudien"

59Publications

Effect of the lipoxygenase inhibitor baicalein on bone tissue and bone healing in ovariectomized rats.

Nutr Metab (Lond) 2019 11;16. Epub 2019 Jan 11.

1Department of Trauma Surgery, Orthopaedics and Plastic Surgery, University Medical Center Goettingen, 37075 Goettingen, Germany.

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http://dx.doi.org/10.1186/s12986-018-0327-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6329162PMC
January 2019

Genetic Factors of the Disease Course after Sepsis: A Genome-Wide Study for 28Day Mortality.

EBioMedicine 2016 Oct 15;12:239-246. Epub 2016 Sep 15.

Integrated Research and Treatment Center, Center for Sepsis Control and Care (CSCC), Jena University Hospital, Jena, Germany; Center for Clinical Studies, Jena University Hospital, Jena, Germany; Head of Paul-Martini-Clinical Sepsis Research Unit, Department of Anesthesiology and Intensive Care Medicine, Jena University Hospital, Jena, Germany.

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http://dx.doi.org/10.1016/j.ebiom.2016.08.043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5078589PMC
October 2016

The distribution of α-kleisin during meiosis in the holocentromeric plant Luzula elegans.

Chromosome Res 2016 09 13;24(3):393-405. Epub 2016 Jun 13.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, 06466, Stadt Seeland, Germany.

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http://dx.doi.org/10.1007/s10577-016-9529-5DOI Listing
September 2016

A Homolog of Blade-On-Petiole 1 and 2 (BOP1/2) Controls Internode Length and Homeotic Changes of the Barley Inflorescence.

Plant Physiol 2016 06 14;171(2):1113-27. Epub 2016 Apr 14.

Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, 06466 Stadt Seeland, Germany (M.J., Ma.M., A.H., F.S., T.R., T.S., B.S., S.B., U.S., N.S.);Institute of Plant Science and Resources, Okayama University, Okayama 710-0046, Japan (Sh.T., T.Y.);James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom (A.D., R.W.);Leibniz Institute on Aging and Fritz-Lipmann Institute, 07745 Jena, Germany (St.T.);Applied Genomics Institute, University of Udine, 33100 Udine, Italy (Mi.M.); andDivision of Plant Sciences, University of Dundee, Dundee DD1 4HN, United Kingdom (R.W.)

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http://dx.doi.org/10.1104/pp.16.00124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4902598PMC
June 2016

Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes.

Plant Biotechnol J 2016 07 23;14(7):1511-22. Epub 2016 Jan 23.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, Germany.

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http://dx.doi.org/10.1111/pbi.12511DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5066668PMC
July 2016

Narrowing down the distal border of the copy number variable beta-defensin gene cluster on human 8p23.

BMC Res Notes 2014 Feb 19;7:93. Epub 2014 Feb 19.

Leibniz Institute for Age Research - Fritz Lipmann Institute, Beutenbergstr, 11, D-07745 Jena, Germany.

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http://dx.doi.org/10.1186/1756-0500-7-93DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942070PMC
February 2014

Comparative analysis of mitochondrial genomes from closely related Rhynchosporium species reveals extensive intron invasion.

Fungal Genet Biol 2014 Jan 13;62:34-42. Epub 2013 Nov 13.

Plant Pathology Group, Institute of Integrative Biology, ETH Zurich, Universitätstrasse 2, CH-8092 Zurich, Switzerland.

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http://dx.doi.org/10.1016/j.fgb.2013.11.001DOI Listing
January 2014

Genomics-based high-resolution mapping of the BaMMV/BaYMV resistance gene rym11 in barley (Hordeum vulgare L.).

Theor Appl Genet 2013 May 2;126(5):1201-12. Epub 2013 Mar 2.

Julius Kuehn-Institute (JKI), Federal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Erwin-Baur-Str. 27, 06484 Quedlinburg, Germany.

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http://dx.doi.org/10.1007/s00122-013-2047-3DOI Listing
May 2013

The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization.

Plant J 2013 Feb 12;73(4):555-65. Epub 2012 Dec 12.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany.

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http://dx.doi.org/10.1111/tpj.12054DOI Listing
February 2013

Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae.

PLoS One 2012 24;7(9):e45307. Epub 2012 Sep 24.

John Bingham Laboratory, National Institute of Agricultural Botany, Huntington Road, Cambridge, United Kingdom.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0045307PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3454399PMC
February 2013

Comparative evaluation of establishing a human gut microbial community within rodent models.

Gut Microbes 2012 May-Jun;3(3):234-49. Epub 2012 May 1.

Microbial Interactions and Processes Research Group, Department of Medical Microbiology, Helmholtz Centre for Infection Research, Braunschweig, Germany.

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http://dx.doi.org/10.4161/gmic.19934DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3427216PMC
January 2013

Sequencing of 21 varicella-zoster virus genomes reveals two novel genotypes and evidence of recombination.

J Virol 2012 Feb 30;86(3):1608-22. Epub 2011 Nov 30.

Department of Virology and Antiviral Therapy, Jena University Hospital, Friedrich Schiller University Jena, Jena, Germany.

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http://dx.doi.org/10.1128/JVI.06233-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3264370PMC
February 2012

From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.).

BMC Plant Biol 2011 Sep 28;11:131. Epub 2011 Sep 28.

Plant Breeding, Technische Universität München, Centre of Life and Food Sciences Weihenstephan, 85354 Freising, Germany.

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http://dx.doi.org/10.1186/1471-2229-11-131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3191334PMC
September 2011

Highly parallel gene-to-BAC addressing using microarrays.

Biotechniques 2011 Mar;50(3):165-74

Programme of Genetics, Scottish Crop Research Institute, Dundee, UK.

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http://dx.doi.org/10.2144/000113627DOI Listing
March 2011

The ITS1-5.8S-ITS2 sequence region in the Musaceae: structure, diversity and use in molecular phylogeny.

PLoS One 2011 Mar 22;6(3):e17863. Epub 2011 Mar 22.

Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Olomouc, Czech Republic.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0017863PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3062550PMC
March 2011

Linking chemical and microbial diversity in marine sponges: possible role for poribacteria as producers of methyl-branched fatty acids.

Chembiochem 2010 Dec;11(18):2572-8

Kekulé Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Strasse 1, 53121 Bonn, Germany.

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http://dx.doi.org/10.1002/cbic.201000510DOI Listing
December 2010

A poke into the diversity and associations within human anterior nare microbial communities.

ISME J 2010 Jul 25;4(7):839-51. Epub 2010 Feb 25.

Microbial Interactions and Processes Research Group, Department of Medical Microbiology, Helmholtz Centre for Infection Research, Braunschweig, Germany.

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http://dx.doi.org/10.1038/ismej.2010.15DOI Listing
July 2010

The unique complexity of the CYP3A4 upstream region suggests a nongenetic explanation of its expression variability.

Pharmacogenet Genomics 2010 Mar;20(3):167-78

Department of Pharmacology, Universitätsmedizin, Johannes Gutenberg University, Mainz, Germany.

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http://dx.doi.org/10.1097/FPC.0b013e328336bbebDOI Listing
March 2010

Gene content and virtual gene order of barley chromosome 1H.

Plant Physiol 2009 Oct 19;151(2):496-505. Epub 2009 Aug 19.

Munich Information Center for Protein Sequences/Institute for Bioinformatics and Systems Biology, Helmholtz Zentrum Munich, German Research Center for Environmental Health, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1104/pp.109.142612DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2754631PMC
October 2009

A highly conserved retinoic acid responsive element controls wt1a expression in the zebrafish pronephros.

Development 2009 Sep;136(17):2883-92

Molecular Genetics Group, Leibniz Institute for Age Research-Fritz Lipmann Institute, Beutenbergstrasse 11, Jena, Germany.

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http://dx.doi.org/10.1242/dev.031773DOI Listing
September 2009

Exploiting the mosaic structure of trans-acyltransferase polyketide synthases for natural product discovery and pathway dissection.

Nat Biotechnol 2008 Feb 27;26(2):225-33. Epub 2008 Jan 27.

Kekulé Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany.

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http://www.nature.com/articles/nbt1379
Publisher Site
http://dx.doi.org/10.1038/nbt1379DOI Listing
February 2008

Mapping human genetic ancestry.

Mol Biol Evol 2007 Oct 28;24(10):2266-76. Epub 2007 Jul 28.

Center for Integrative Bioinformatics of Vienna, Max F. Perutz Laboratories, Vienna, Austria.

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https://academic.oup.com/mbe/article-lookup/doi/10.1093/molb
Publisher Site
http://dx.doi.org/10.1093/molbev/msm156DOI Listing
October 2007

Method for preparing single-stranded DNA templates for Pyrosequencing using vector ligation and universal biotinylated primers.

Anal Biochem 2006 Sep 12;356(2):194-201. Epub 2006 May 12.

Genome Analysis, Leibniz Institute for Age Research-Fritz Lipmann Institute, 07745 Jena, Germany.

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http://dx.doi.org/10.1016/j.ab.2006.04.043DOI Listing
September 2006

Should the draft chimpanzee sequence be finished?

Trends Genet 2006 Mar 10;22(3):122-5. Epub 2006 Jan 10.

Institut für Molekulare Biotechnologie, Genomanalyse, Beutenbergstr. 11, D-07743 Jena, Germany.

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http://dx.doi.org/10.1016/j.tig.2005.12.007DOI Listing
March 2006

Validation of mRNA/EST-based gene predictions in human Xp11.4 revealed differences to the organization of the orthologous mouse locus.

Mamm Genome 2005 Dec 8;16(12):934-41. Epub 2005 Dec 8.

Genome Analysis, Institute of Molecular Biotechnology, Beutenbergstr. 11, 07745, Jena, Germany.

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http://dx.doi.org/10.1007/s00335-005-0090-3DOI Listing
December 2005

The DNA sequence of the human X chromosome.

Authors:
Mark T Ross Darren V Grafham Alison J Coffey Steven Scherer Kirsten McLay Donna Muzny Matthias Platzer Gareth R Howell Christine Burrows Christine P Bird Adam Frankish Frances L Lovell Kevin L Howe Jennifer L Ashurst Robert S Fulton Ralf Sudbrak Gaiping Wen Matthew C Jones Matthew E Hurles T Daniel Andrews Carol E Scott Stephen Searle Juliane Ramser Adam Whittaker Rebecca Deadman Nigel P Carter Sarah E Hunt Rui Chen Andrew Cree Preethi Gunaratne Paul Havlak Anne Hodgson Michael L Metzker Stephen Richards Graham Scott David Steffen Erica Sodergren David A Wheeler Kim C Worley Rachael Ainscough Kerrie D Ambrose M Ali Ansari-Lari Swaroop Aradhya Robert I S Ashwell Anne K Babbage Claire L Bagguley Andrea Ballabio Ruby Banerjee Gary E Barker Karen F Barlow Ian P Barrett Karen N Bates David M Beare Helen Beasley Oliver Beasley Alfred Beck Graeme Bethel Karin Blechschmidt Nicola Brady Sarah Bray-Allen Anne M Bridgeman Andrew J Brown Mary J Brown David Bonnin Elspeth A Bruford Christian Buhay Paula Burch Deborah Burford Joanne Burgess Wayne Burrill John Burton Jackie M Bye Carol Carder Laura Carrel Joseph Chako Joanne C Chapman Dean Chavez Ellson Chen Guan Chen Yuan Chen Zhijian Chen Craig Chinault Alfredo Ciccodicola Sue Y Clark Graham Clarke Chris M Clee Sheila Clegg Kerstin Clerc-Blankenburg Karen Clifford Vicky Cobley Charlotte G Cole Jen S Conquer Nicole Corby Richard E Connor Robert David Joy Davies Clay Davis John Davis Oliver Delgado Denise Deshazo Pawandeep Dhami Yan Ding Huyen Dinh Steve Dodsworth Heather Draper Shannon Dugan-Rocha Andrew Dunham Matthew Dunn K James Durbin Ireena Dutta Tamsin Eades Matthew Ellwood Alexandra Emery-Cohen Helen Errington Kathryn L Evans Louisa Faulkner Fiona Francis John Frankland Audrey E Fraser Petra Galgoczy James Gilbert Rachel Gill Gernot Glöckner Simon G Gregory Susan Gribble Coline Griffiths Russell Grocock Yanghong Gu Rhian Gwilliam Cerissa Hamilton Elizabeth A Hart Alicia Hawes Paul D Heath Katja Heitmann Steffen Hennig Judith Hernandez Bernd Hinzmann Sarah Ho Michael Hoffs Phillip J Howden Elizabeth J Huckle Jennifer Hume Paul J Hunt Adrienne R Hunt Judith Isherwood Leni Jacob David Johnson Sally Jones Pieter J de Jong Shirin S Joseph Stephen Keenan Susan Kelly Joanne K Kershaw Ziad Khan Petra Kioschis Sven Klages Andrew J Knights Anna Kosiura Christie Kovar-Smith Gavin K Laird Cordelia Langford Stephanie Lawlor Margaret Leversha Lora Lewis Wen Liu Christine Lloyd David M Lloyd Hermela Loulseged Jane E Loveland Jamieson D Lovell Ryan Lozado Jing Lu Rachael Lyne Jie Ma Manjula Maheshwari Lucy H Matthews Jennifer McDowall Stuart McLaren Amanda McMurray Patrick Meidl Thomas Meitinger Sarah Milne George Miner Shailesh L Mistry Margaret Morgan Sidney Morris Ines Müller James C Mullikin Ngoc Nguyen Gabriele Nordsiek Gerald Nyakatura Christopher N O'Dell Geoffery Okwuonu Sophie Palmer Richard Pandian David Parker Julia Parrish Shiran Pasternak Dina Patel Alex V Pearce Danita M Pearson Sarah E Pelan Lesette Perez Keith M Porter Yvonne Ramsey Kathrin Reichwald Susan Rhodes Kerry A Ridler David Schlessinger Mary G Schueler Harminder K Sehra Charles Shaw-Smith Hua Shen Elizabeth M Sheridan Ratna Shownkeen Carl D Skuce Michelle L Smith Elizabeth C Sotheran Helen E Steingruber Charles A Steward Roy Storey R Mark Swann David Swarbreck Paul E Tabor Stefan Taudien Tineace Taylor Brian Teague Karen Thomas Andrea Thorpe Kirsten Timms Alan Tracey Steve Trevanion Anthony C Tromans Michele d'Urso Daniel Verduzco Donna Villasana Lenee Waldron Melanie Wall Qiaoyan Wang James Warren Georgina L Warry Xuehong Wei Anthony West Siobhan L Whitehead Mathew N Whiteley Jane E Wilkinson David L Willey Gabrielle Williams Leanne Williams Angela Williamson Helen Williamson Laurens Wilming Rebecca L Woodmansey Paul W Wray Jennifer Yen Jingkun Zhang Jianling Zhou Huda Zoghbi Sara Zorilla David Buck Richard Reinhardt Annemarie Poustka André Rosenthal Hans Lehrach Alfons Meindl Patrick J Minx Ladeana W Hillier Huntington F Willard Richard K Wilson Robert H Waterston Catherine M Rice Mark Vaudin Alan Coulson David L Nelson George Weinstock John E Sulston Richard Durbin Tim Hubbard Richard A Gibbs Stephan Beck Jane Rogers David R Bentley

Nature 2005 Mar;434(7031):325-37

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

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http://www.genenames.org/sites/genenames.org/files/documents
Web Search
http://www.nature.com/doifinder/10.1038/nature03440
Publisher Site
http://dx.doi.org/10.1038/nature03440DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2665286PMC
March 2005