Stefan J Green

Stefan J Green

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Stefan J Green

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Effect of Dietary Fiber on the Composition of the Murine Dental Microbiome.

Dent J (Basel) 2019 Jun 1;7(2). Epub 2019 Jun 1.

Department of BioMedical Sciences, School of Medicine, Mercer University, Macon, GA 31207, USA.

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http://dx.doi.org/10.3390/dj7020058DOI Listing
June 2019

Role of TLR4 in the gut-brain axis in Parkinson's disease: a translational study from men to mice.

Gut 2019 05 15;68(5):829-843. Epub 2018 Dec 15.

Division of Pharmacology, Utrecht Institute for Pharmaceutical Sciences, Faculty of Science, Utrecht University, Utrecht, The Netherlands.

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http://dx.doi.org/10.1136/gutjnl-2018-316844DOI Listing
May 2019

Genome Sequence of Marine-Derived sp. Strain F001, a Producer of Akashin A and Diazaquinomycins.

Microbiol Resour Announc 2019 May 9;8(19). Epub 2019 May 9.

Department of Medicinal Chemistry and Pharmacognosy and Center for Biomolecular Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois, USA

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http://dx.doi.org/10.1128/MRA.00165-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509518PMC
May 2019

Detection of respiratory pathogens in clinical samples using metagenomic shotgun sequencing.

J Med Microbiol 2019 May 28. Epub 2019 May 28.

2 Division of Pulmonary and Critical Care, Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.

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https://www.microbiologyresearch.org/content/journal/jmm/10.
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http://dx.doi.org/10.1099/jmm.0.000968DOI Listing
May 2019

High Frequency of MYD88 L265P Mutation in Primary Ocular Adnexal Marginal Zone Lymphoma and Its Clinicopathologic Correlation: A Study From a Single Institution.

Arch Pathol Lab Med 2019 Apr 16;143(4):483-493. Epub 2018 Nov 16.

From the Departments of Pathology (Drs Behdad, Gao, and Raparia; Mr Dittman; Drs Qi, Q Chen, and Y-H Chen) and Ophthalmology (Dr Bryar), Northwestern Memorial Hospital, Northwestern University Feinberg School of Medicine, Chicago, Illinois; Wayne State University School of Medicine, Detroit, Michigan (Dr Zhou); Research Resources Center, University of Illinois at Chicago, Chicago (Dr Green); Department of Pathology, University of Michigan, Ann Arbor (Dr Betz). Dr Zhou is currently at the Department of Ophthalmology, Bascom-Palmer Eye Institute, Miami, Florida. Dr Raparia is currently at the Department of Pathology, Kaiser Permanente, Santa Clara, California.

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http://dx.doi.org/10.5858/arpa.2018-0092-OADOI Listing
April 2019

Physical Inaccessibility of a Resistant Starch Shifts Mouse Gut Microbiota to Butyrogenic Firmicutes.

Mol Nutr Food Res 2019 04 27;63(7):e1801012. Epub 2019 Jan 27.

Whistler Center for Carbohydrate Research, Department of Food Science, Purdue University, West Lafayette, IN, 47907, USA.

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http://doi.wiley.com/10.1002/mnfr.201801012
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http://dx.doi.org/10.1002/mnfr.201801012DOI Listing
April 2019

The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight.

Science 2019 04;364(6436)

Northwestern University, Evanston, IL, USA.

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http://dx.doi.org/10.1126/science.aau8650DOI Listing
April 2019

Considerations When Designing a Microbiome Study: Implications for Nursing Science.

Biol Res Nurs 2019 03 8;21(2):125-141. Epub 2018 Nov 8.

3 Sensory Science and Metabolism Unit, Biobehavioral Branch, Division of Intramural Research, National Institute of Nursing Research, National Institutes of Health, Department of Health and Human Services, Bethesda, MD, USA.

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http://dx.doi.org/10.1177/1099800418811639DOI Listing
March 2019

Root microbiome response to treated wastewater irrigation.

Sci Total Environ 2019 Mar 20;655:899-907. Epub 2018 Nov 20.

Institute of Soil, Water and Environmental Sciences, Agricultural Research Organization - Volcani Center, Rishon Lezion 7528809, Israel. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00489697183460
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http://dx.doi.org/10.1016/j.scitotenv.2018.11.251DOI Listing
March 2019

PCR effects of melting temperature adjustment of individual primers in degenerate primer pools.

PeerJ 2019 4;7:e6570. Epub 2019 Mar 4.

Sequencing Core, Research Resources Center, University of Illinois at Chicago, Chicago, IL, United States of America.

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https://peerj.com/articles/6570
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http://dx.doi.org/10.7717/peerj.6570DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6404654PMC
March 2019

Complete Genome Sequence of a USA100 Methicillin-Resistant Staphylococcus aureus Strain.

Microbiol Resour Announc 2019 Mar 14;8(11). Epub 2019 Mar 14.

Division of Infectious Disease, Department of Medicine, Rush University Medical Center, Chicago, Illinois, USA

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http://dx.doi.org/10.1128/MRA.00006-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6424203PMC
March 2019

Making and Sequencing Heavily Multiplexed, High-Throughput 16S Ribosomal RNA Gene Amplicon Libraries Using a Flexible, Two-Stage PCR Protocol.

Methods Mol Biol 2018 ;1783:149-169

DNA Services Facility, Research Resources Center, University of Illinois at Chicago, Chicago, IL, USA.

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http://link.springer.com/10.1007/978-1-4939-7834-2_7
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http://dx.doi.org/10.1007/978-1-4939-7834-2_7DOI Listing
February 2019

Association of nasal microbiome and asthma control in patients with chronic rhinosinusitis.

Clin Exp Allergy 2018 Dec 24;48(12):1744-1747. Epub 2018 Sep 24.

Allergy/Immunology Division, Department of Internal Medicine, Rush University Medical Center, Chicago, Illinois.

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http://dx.doi.org/10.1111/cea.13255DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6265059PMC
December 2018

Chronic stress-induced gut dysfunction exacerbates Parkinson's disease phenotype and pathology in a rotenone-induced mouse model of Parkinson's disease.

Neurobiol Dis 2018 Dec 21. Epub 2018 Dec 21.

Department of Internal Medicine, Division of Digestive Diseases, Rush University Medical Center, Chicago, IL, USA; Division of Pharmacology, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.nbd.2018.12.012DOI Listing
December 2018

Complete Genome Sequence of sp. Strain D7, a Virulent Bacterium Isolated from an Algal Bloom in the North Atlantic.

Microbiol Resour Announc 2018 Nov 15;7(19). Epub 2018 Nov 15.

Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.

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http://dx.doi.org/10.1128/MRA.01379-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6256486PMC
November 2018

Complete Genome of Micromonospora sp. Strain B006 Reveals Biosynthetic Potential of a Lake Michigan Actinomycete.

J Nat Prod 2018 09 15;81(9):2057-2068. Epub 2018 Aug 15.

Department of Medicinal Chemistry and Pharmacognosy and Center for Biomolecular Sciences, College of Pharmacy , University of Illinois at Chicago , Chicago , Illinois 60607 , United States.

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http://pubs.acs.org/doi/10.1021/acs.jnatprod.8b00394
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http://dx.doi.org/10.1021/acs.jnatprod.8b00394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6174880PMC
September 2018

Assessing the Efficiency of Cultivation Techniques To Recover Natural Product Biosynthetic Gene Populations from Sediment.

ACS Chem Biol 2018 08 10;13(8):2074-2081. Epub 2018 Jul 10.

German Centre for Infection Research (DZIF), Interfaculty Institute of Microbiology and Infection Medicine Tübingen , University of Tübingen , Auf der Morgenstelle 28 , 72076 Tübingen , Germany.

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http://dx.doi.org/10.1021/acschembio.8b00254DOI Listing
August 2018

Draft Genome Sequence of Muricauda sp. Strain K001 Isolated from a Marine Cyanobacterial Culture.

Genome Announc 2018 May 31;6(22). Epub 2018 May 31.

Department of Cellular Biology, Biological Sciences Institute, University of Brasília, Brasília, Brazil

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http://dx.doi.org/10.1128/genomeA.00451-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5981047PMC
May 2018

Effects of green tea on miRNA and microbiome of oral epithelium.

Sci Rep 2018 Apr 12;8(1):5873. Epub 2018 Apr 12.

Department of Oral Medicine & Diagnostic Sciences, Center for Molecular Biology of Oral Diseases, College of Dentistry, University of Illinois at Chicago, 801 South Paulina Street, Chicago, IL, USA.

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http://dx.doi.org/10.1038/s41598-018-22994-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5897334PMC
April 2018

Human milk oligosaccharides protect against the development of autoimmune diabetes in NOD-mice.

Sci Rep 2018 Mar 1;8(1):3829. Epub 2018 Mar 1.

Utrecht University, Faculty of Science, Department of Pharmaceutical Sciences, Division of Pharmacology, Utrecht, The Netherlands.

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http://dx.doi.org/10.1038/s41598-018-22052-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832804PMC
March 2018

The Potential Role of Gut-Derived Inflammation in Multiple System Atrophy.

J Parkinsons Dis 2017 ;7(2):331-346

Department of Internal Medicine, Division of Gastroenterology, Rush University Medical Center, Chicago, IL, USA.

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http://dx.doi.org/10.3233/JPD-160991DOI Listing
January 2018

Microbial Diversity of Genital Ulcers of HSV-2 Seropositive Women.

Sci Rep 2017 11 13;7(1):15475. Epub 2017 Nov 13.

Division of Epidemiology & Biostatistics, School of Public Health, University of Illinois at Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.1038/s41598-017-15554-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5684367PMC
November 2017

Investigation of Respiratory Syncytial Virus Outbreak on an Adult Stem Cell Transplant Unit by Use of Whole-Genome Sequencing.

J Clin Microbiol 2017 10 26;55(10):2956-2963. Epub 2017 Jul 26.

Department of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.

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http://jcm.asm.org/lookup/doi/10.1128/JCM.00360-17
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http://dx.doi.org/10.1128/JCM.00360-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5625381PMC
October 2017

Starch-entrapped microsphere fibers improve bowel habit but do not exhibit prebiotic capacity in those with unsatisfactory bowel habits: a phase I, randomized, double-blind, controlled human trial.

Nutr Res 2017 Aug 2;44:27-37. Epub 2017 Jun 2.

Division of Digestive Diseases and Nutrition, Department of Internal Medicine, Rush University Medical Center, 1725 W Harrison St Ste 206, Chicago, IL, USA, 60612. Electronic address:

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http://dx.doi.org/10.1016/j.nutres.2017.05.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5580357PMC
August 2017

Atopic dermatitis and food sensitization in South African toddlers: Role of fiber and gut microbiota.

Ann Allergy Asthma Immunol 2017 06;118(6):742-743.e3

Division of Allergy, Department of Paediatrics and Child Health, University of Cape Town, Cape Town, South Africa; In-FLAME, the International Inflammation Network World Universities Network (WUN).

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http://dx.doi.org/10.1016/j.anai.2017.04.011DOI Listing
June 2017

Hepatic deficiency of the pioneer transcription factor FoxA restricts hepatitis B virus biosynthesis by the developmental regulation of viral DNA methylation.

PLoS Pathog 2017 02 24;13(2):e1006239. Epub 2017 Feb 24.

Department of Microbiology and Immunology College of Medicine University of Illinois at Chicago 909 South Wolcott Avenue Chicago, IL, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1006239DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5342274PMC
February 2017

Change in Pattern of HER2 Fluorescent in Situ Hybridization (FISH) Results in Breast Cancers Submitted for FISH Testing: Experience of a Reference Laboratory Using US Food and Drug Administration Criteria and American Society of Clinical Oncology and College of American Pathologists Guidelines.

J Clin Oncol 2016 10;34(29):3502-3510

Mithun Vinod Shah, Anne E. Wiktor, Reid G. Meyer, Kathleen S. Tenner, Karla V. Ballman, Stefan J, Green, William R. Sukov, Rhett P. Ketterling, Robert B. Jenkins, Mayo Clinic, Rochester, MN; and Edith A. Perez, Mayo Clinic, Jacksonville, FL.

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http://dx.doi.org/10.1200/JCO.2015.61.8983DOI Listing
October 2016

Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches.

PLoS One 2015 21;10(5):e0128122. Epub 2015 May 21.

DNA Services Facility, Research Resources Center, University of Illinois at Chicago, Chicago, Illinois, United States of America; Dept. of Bioengineering, University of Illinois at Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0128122PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440812PMC
April 2016

Burn Injury Alters the Intestinal Microbiome and Increases Gut Permeability and Bacterial Translocation.

PLoS One 2015 8;10(7):e0129996. Epub 2015 Jul 8.

Burn & Shock Trauma Research Institute, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, United States of America; Integrative Cell Biology Program, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, United States of America; Departments of Surgery, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, United States of America; Departments of Microbiology and Immunology, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129996PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4496078PMC
April 2016

The Gastrointestinal Microbiome: Alcohol Effects on the Composition of Intestinal Microbiota.

Alcohol Res 2015 ;37(2):223-36

Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, the Netherlands.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4590619PMC
April 2016

Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community.

MBio 2016 Apr 5;7(2):e02234-15. Epub 2016 Apr 5.

Institute for Environmental Genomics, Department of Microbiology and Plant Sciences, University of Oklahoma, Norman, Oklahoma, USA Earth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing, China

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http://dx.doi.org/10.1128/mBio.02234-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4817265PMC
April 2016

The Circadian Clock Mutation Promotes Intestinal Dysbiosis.

Alcohol Clin Exp Res 2016 Feb;40(2):335-47

Department of Internal Medicine , Division of Gastroenterology, Rush University Medical Center, Chicago, Illinois.

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http://dx.doi.org/10.1111/acer.12943DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4977829PMC
February 2016

Genomic Epidemiology of USA300 Methicillin-Resistant Staphylococcus aureus in an Urban Community.

Clin Infect Dis 2016 Jan 7;62(1):37-44. Epub 2015 Sep 7.

Rush University Medical Center/Stroger Hospital of Cook County, Chicago, Illinois.

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http://dx.doi.org/10.1093/cid/civ794DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4678108PMC
January 2016

Significant differences in fecal microbiota are associated with various stages of glucose tolerance in African American male veterans.

Transl Res 2015 Nov 8;166(5):401-11. Epub 2015 Jul 8.

Department of Medicine, University of Illinois Medical Center, Chicago, Ill; Department of Medicine, Jesse Brown VA Medical Center, Chicago, Ill. Electronic address:

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http://dx.doi.org/10.1016/j.trsl.2015.06.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4916963PMC
November 2015

Draft Genome Sequence of the Pathogenic Bacterium Vibrio vulnificus V252 Biotype 1, Isolated in Israel.

Genome Announc 2015 Oct 15;3(5). Epub 2015 Oct 15.

Faculty of Biotechnology and Food Engineering, Technion-Israel Institute of Technology, Haifa, Israel

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http://dx.doi.org/10.1128/genomeA.01182-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4611685PMC
October 2015

Colonic bacterial composition in Parkinson's disease.

Mov Disord 2015 Sep 16;30(10):1351-60. Epub 2015 Jul 16.

Department of Neurology, Rush University Medical Center, Chicago, Illinois, USA.

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http://dx.doi.org/10.1002/mds.26307DOI Listing
September 2015

Circadian disorganization alters intestinal microbiota.

PLoS One 2014 21;9(5):e97500. Epub 2014 May 21.

Department of Internal Medicine, Division of Gastroenterology, Rush University Medical Center, Chicago, Illinois, United States of America; Department of Pharmacology, Rush University Medical Center, Chicago, Illinois, United States of America; Department of Physiology, Rush University Medical Center, Chicago, Illinois, United States of America; Division of Pharmacology, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0097500PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4029760PMC
June 2015

Metagenomics Reveals Planktonic Bacterial Community Shifts across a Natural CO2 Gradient in the Mediterranean Sea.

Genome Announc 2015 Feb 12;3(1). Epub 2015 Feb 12.

Marine Biology and Ecology Research Centre, Plymouth University, Plymouth, United Kingdom.

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http://dx.doi.org/10.1128/genomeA.01543-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4333660PMC
February 2015

Metagenomic evaluation of bacterial and archaeal diversity in the geothermal hot springs of manikaran, India.

Genome Announc 2015 Feb 19;3(1). Epub 2015 Feb 19.

School of the Environment, Florida A&M University, Tallahassee, Florida, USA.

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http://dx.doi.org/10.1128/genomeA.01544-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4335328PMC
February 2015

Niche and host-associated functional signatures of the root surface microbiome.

Nat Commun 2014 Sep 18;5:4950. Epub 2014 Sep 18.

Department of Soil, Water and Environmental Sciences, Agricultural Research Organization of Israel, Bet Dagan 50250, Israel.

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http://dx.doi.org/10.1038/ncomms5950DOI Listing
September 2014

A survey of deepwater horizon (DWH) oil-degrading bacteria from the Eastern oyster biome and its surrounding environment.

Front Microbiol 2014 9;5:149. Epub 2014 Apr 9.

Environmental Biotechnology Laboratory, School of the Environment, Florida Agricultural and Mechanical University Tallahassee, FL, USA ; NOAA Environmental Cooperative Science Center, School of the Environment, Florida Agricultural and Mechanical University Tallahassee, FL, USA.

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http://dx.doi.org/10.3389/fmicb.2014.00149DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3988384PMC
April 2014

Restriction site-associated DNA sequencing generates high-quality single nucleotide polymorphisms for assessing hybridization between bighead and silver carp in the United States and China.

Mol Ecol Resour 2014 Jan 20;14(1):79-86. Epub 2013 Aug 20.

Department of Biological Sciences, Western Illinois University, 1 University Circle, Macomb, IL, 61455, USA; Illinois Natural History Survey, 1816 S. Oak Street, Champaign, IL, 61820, USA.

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http://dx.doi.org/10.1111/1755-0998.12152DOI Listing
January 2014

Draft Genome Sequence of Alicyclobacillus acidoterrestris Strain ATCC 49025.

Genome Announc 2013 Sep 5;1(5). Epub 2013 Sep 5.

Department of Food Quality and Safety, Agricultural Research Organization The Volcani Center, Bet-Dagan, Israel.

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http://dx.doi.org/10.1128/genomeA.00638-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764408PMC
September 2013

Isolation and physiological characterization of psychrophilic denitrifying bacteria from permanently cold Arctic fjord sediments (Svalbard, Norway).

Environ Microbiol 2013 May 26;15(5):1606-18. Epub 2013 Mar 26.

Earth Ocean and Atmospheric Science Department, Florida State University, Tallahassee, FL, USA.

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http://dx.doi.org/10.1111/1462-2920.12110DOI Listing
May 2013

Microbial diversity of genital ulcer disease in men enrolled in a randomized trial of male circumcision in Kisumu, Kenya.

PLoS One 2012 27;7(7):e38991. Epub 2012 Jul 27.

Department of Epidemiology and Biostatistics, University of Illinois at Chicago School of Public Health, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0038991PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3407166PMC
April 2013

Thermodesulfobacterium geofontis sp. nov., a hyperthermophilic, sulfate-reducing bacterium isolated from Obsidian Pool, Yellowstone National Park.

Extremophiles 2013 Mar 24;17(2):251-63. Epub 2013 Jan 24.

Biosciences Division, Oak Ridge National Laboratory, BioEnergy Science Center, Oak Ridge, TN 37831, USA.

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http://dx.doi.org/10.1007/s00792-013-0512-1DOI Listing
March 2013

Draft Genome Sequence of Rhodococcus opacus Strain M213 Shows a Diverse Catabolic Potential.

Genome Announc 2013 Jan 14;1(1). Epub 2013 Feb 14.

School of the Environment, Florida A&M University, Tallahassee, Florida, USA.

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http://dx.doi.org/10.1128/genomeA.00144-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3569331PMC
January 2013

Molecular tools for isolate and community studies of Pyrenomycete fungi.

Mycologia 2004 May-Jun;96(3):439-51

Department of Microbiology and Plant Pathology, Faculty of Agricultural, Food and Environmental Quality Sciences, The Hebrew University of Jerusalem, Rehovot, Israel, and Institute of Soil, Water and Environmental Sciences, Agriculture Research Organization, The Volcani Center, P.O. Box 6, Bet-Dagan, 50-250, Israel.

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October 2012

Rhodanobacter denitrificans sp. nov., isolated from nitrate-rich zones of a contaminated aquifer.

Int J Syst Evol Microbiol 2012 Oct 25;62(Pt 10):2457-62. Epub 2011 Nov 25.

Earth, Ocean, and Atmospheric Science Department, Florida State University, Tallahassee, FL, USA.

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http://dx.doi.org/10.1099/ijs.0.035840-0DOI Listing
October 2012

Microbial and geochemical assessment of bauxitic un-mined and post-mined chronosequence soils from Mocho Mountains, Jamaica.

Microb Ecol 2012 Oct 4;64(3):738-49. Epub 2012 Mar 4.

School of the Environment, Florida A&M University, Tallahassee, FL 32307, USA.

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http://dx.doi.org/10.1007/s00248-012-0020-3DOI Listing
October 2012

Draft genome sequence of Flavobacterium sp. strain F52, isolated from the rhizosphere of bell pepper (Capsicum annuum L. cv. Maccabi).

J Bacteriol 2012 Oct;194(19):5462-3

Institute of Soil, Water and Environmental Sciences, The Volcani Center, Agricultural Research Organization, Bet Dagan, Israel.

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http://dx.doi.org/10.1128/JB.01249-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3457196PMC
October 2012

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes.

Environ Microbiol 2012 Feb 19;14(2):285-90. Epub 2011 Sep 19.

Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831-6038, USA.

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http://dx.doi.org/10.1111/j.1462-2920.2011.02550.xDOI Listing
February 2012

Hydrocarbon-degrading bacteria and the bacterial community response in gulf of Mexico beach sands impacted by the deepwater horizon oil spill.

Appl Environ Microbiol 2011 Nov 23;77(22):7962-74. Epub 2011 Sep 23.

Georgia Institute of Technology, Schools of Biology and Earth and Atmospheric Sciences, Room 225, Cherry Emerson Bldg., 310 Ferst Dr., Atlanta, GA 30332-0230, USA.

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http://dx.doi.org/10.1128/AEM.05402-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3208977PMC
November 2011

Bioelectrochemical perchlorate reduction in a microbial fuel cell.

Environ Sci Technol 2010 Jun;44(12):4685-91

Department of Civil Engineering and Geological Sciences, University of Notre Dame, Notre Dame, Indiana 46556, USA.

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http://dx.doi.org/10.1021/es901758zDOI Listing
June 2010

Molecular and morphological characterization of cyanobacterial diversity in the stromatolites of Highborne Cay, Bahamas.

ISME J 2009 May 15;3(5):573-87. Epub 2009 Jan 15.

Department of Microbiology and Cell Science, Space Life Sciences Laboratory, University of Florida, Kennedy Space Center, FL 32899, USA.

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http://dx.doi.org/10.1038/ismej.2008.129DOI Listing
May 2009

Contrasting patterns of seed and root colonization by bacteria from the genus Chryseobacterium and from the family Oxalobacteraceae.

ISME J 2007 Aug 24;1(4):291-9. Epub 2007 May 24.

Faculty of Agricultural, Food and Environmental Quality Sciences, Hebrew University of Jerusalem, Rehovot, Israel.

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http://dx.doi.org/10.1038/ismej.2007.33DOI Listing
August 2007

Succession of bacterial communities during early plant development: transition from seed to root and effect of compost amendment.

Appl Environ Microbiol 2006 Jun;72(6):3975-83

Institute of Soil, Water and Environmental Sciences, Agriculture Research Organization, The Volcani Center, P.O. Box 6, Bet-Dagan 50-250, Israel.

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http://dx.doi.org/10.1128/AEM.02771-05DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1489615PMC
June 2006

Succession of bacterial communities during early plant development: transition from seed to root and effect of compost amendment.

Appl Environ Microbiol 2006 Jun;72(6):3975-83

Institute of Soil, Water and Environmental Sciences, Agriculture Research Organization, The Volcani Center, P.O. Box 6, Bet-Dagan 50-250, Israel.

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http://dx.doi.org/10.1128/AEM.02771-05DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1489615PMC
June 2006

Competing factors of compost concentration and proximity to root affect the distribution of streptomycetes.

Microb Ecol 2005 Jul 29;50(1):73-81. Epub 2005 Jul 29.

Faculty of Agricultural, Food and Environmental Quality Sciences, Hebrew University of Jerusalem, Rehovot, Israel.

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http://dx.doi.org/10.1007/s00248-004-0111-xDOI Listing
July 2005

Similarity of bacterial communities in sawdust- and straw-amended cow manure composts.

FEMS Microbiol Lett 2004 Apr;233(1):115-23

Faculty of Agricultural, Food and Environmental Quality Sciences, Hebrew University of Jerusalem, Rehovot, Israel.

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http://dx.doi.org/10.1016/j.femsle.2004.01.049DOI Listing
April 2004