Publications by authors named "Stacia K Wyman"

23Publications

Controlled Cycling and Quiescence Enables Efficient HDR in Engraftment-Enriched Adult Hematopoietic Stem and Progenitor Cells.

Cell Rep 2020 Sep;32(9):108093

Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA; Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA; Department of Biology, ETH Zürich, 8093 Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2020.108093DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7487781PMC
September 2020

ATF4 Regulates MYB to Increase γ-Globin in Response to Loss of β-Globin.

Cell Rep 2020 Aug;32(5):107993

Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Biology, ETH Zurich, Zurich 8092, Switzerland; Innovative Genomics Institute, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2020.107993DOI Listing
August 2020

The Histone Chaperone FACT Induces Cas9 Multi-turnover Behavior and Modifies Genome Manipulation in Human Cells.

Mol Cell 2020 07 29;79(2):221-233.e5. Epub 2020 Jun 29.

Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Innovative Genomics Institute, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Biology, ETH Zürich, 8093 Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2020.06.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7398558PMC
July 2020

CRISPR off-target detection with DISCOVER-seq.

Nat Protoc 2020 05 20;15(5):1775-1799. Epub 2020 Apr 20.

Department of Biology, ETH Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1038/s41596-020-0309-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7305837PMC
May 2020

Author Correction: SLC19A1 transports immunoreactive cyclic dinucleotides.

Nature 2020 03;579(7800):E12

Department of Molecular and Cell Biology, and Cancer Research Laboratory, Division of Immunology and Pathogenesis, University of California, Berkeley, CA, USA.

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http://dx.doi.org/10.1038/s41586-020-2064-8DOI Listing
March 2020

SLC19A1 transports immunoreactive cyclic dinucleotides.

Nature 2019 09 11;573(7774):434-438. Epub 2019 Sep 11.

Department of Molecular and Cell Biology, and Cancer Research Laboratory, Division of Immunology and Pathogenesis, University of California, Berkeley, CA, USA.

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http://www.nature.com/articles/s41586-019-1553-0
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http://dx.doi.org/10.1038/s41586-019-1553-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6785039PMC
September 2019

Genome-wide Analyses Identify KIF5A as a Novel ALS Gene.

Authors:
Aude Nicolas Kevin P Kenna Alan E Renton Nicola Ticozzi Faraz Faghri Ruth Chia Janice A Dominov Brendan J Kenna Mike A Nalls Pamela Keagle Alberto M Rivera Wouter van Rheenen Natalie A Murphy Joke J F A van Vugt Joshua T Geiger Rick A Van der Spek Hannah A Pliner Shankaracharya Bradley N Smith Giuseppe Marangi Simon D Topp Yevgeniya Abramzon Athina Soragia Gkazi John D Eicher Aoife Kenna Gabriele Mora Andrea Calvo Letizia Mazzini Nilo Riva Jessica Mandrioli Claudia Caponnetto Stefania Battistini Paolo Volanti Vincenzo La Bella Francesca L Conforti Giuseppe Borghero Sonia Messina Isabella L Simone Francesca Trojsi Fabrizio Salvi Francesco O Logullo Sandra D'Alfonso Lucia Corrado Margherita Capasso Luigi Ferrucci Cristiane de Araujo Martins Moreno Sitharthan Kamalakaran David B Goldstein Aaron D Gitler Tim Harris Richard M Myers Hemali Phatnani Rajeeva Lochan Musunuri Uday Shankar Evani Avinash Abhyankar Michael C Zody Julia Kaye Steven Finkbeiner Stacia K Wyman Alex LeNail Leandro Lima Ernest Fraenkel Clive N Svendsen Leslie M Thompson Jennifer E Van Eyk James D Berry Timothy M Miller Stephen J Kolb Merit Cudkowicz Emily Baxi Michael Benatar J Paul Taylor Evadnie Rampersaud Gang Wu Joanne Wuu Giuseppe Lauria Federico Verde Isabella Fogh Cinzia Tiloca Giacomo P Comi Gianni Sorarù Cristina Cereda Philippe Corcia Hannu Laaksovirta Liisa Myllykangas Lilja Jansson Miko Valori John Ealing Hisham Hamdalla Sara Rollinson Stuart Pickering-Brown Richard W Orrell Katie C Sidle Andrea Malaspina John Hardy Andrew B Singleton Janel O Johnson Sampath Arepalli Peter C Sapp Diane McKenna-Yasek Meraida Polak Seneshaw Asress Safa Al-Sarraj Andrew King Claire Troakes Caroline Vance Jacqueline de Belleroche Frank Baas Anneloor L M A Ten Asbroek José Luis Muñoz-Blanco Dena G Hernandez Jinhui Ding J Raphael Gibbs Sonja W Scholz Mary Kay Floeter Roy H Campbell Francesco Landi Robert Bowser Stefan M Pulst John M Ravits Daniel J L MacGowan Janine Kirby Erik P Pioro Roger Pamphlett James Broach Glenn Gerhard Travis L Dunckley Christopher B Brady Neil W Kowall Juan C Troncoso Isabelle Le Ber Kevin Mouzat Serge Lumbroso Terry D Heiman-Patterson Freya Kamel Ludo Van Den Bosch Robert H Baloh Tim M Strom Thomas Meitinger Aleksey Shatunov Kristel R Van Eijk Mamede de Carvalho Maarten Kooyman Bas Middelkoop Matthieu Moisse Russell L McLaughlin Michael A Van Es Markus Weber Kevin B Boylan Marka Van Blitterswijk Rosa Rademakers Karen E Morrison A Nazli Basak Jesús S Mora Vivian E Drory Pamela J Shaw Martin R Turner Kevin Talbot Orla Hardiman Kelly L Williams Jennifer A Fifita Garth A Nicholson Ian P Blair Guy A Rouleau Jesús Esteban-Pérez Alberto García-Redondo Ammar Al-Chalabi Ekaterina Rogaeva Lorne Zinman Lyle W Ostrow Nicholas J Maragakis Jeffrey D Rothstein Zachary Simmons Johnathan Cooper-Knock Alexis Brice Stephen A Goutman Eva L Feldman Summer B Gibson Franco Taroni Antonia Ratti Cinzia Gellera Philip Van Damme Wim Robberecht Pietro Fratta Mario Sabatelli Christian Lunetta Albert C Ludolph Peter M Andersen Jochen H Weishaupt William Camu John Q Trojanowski Vivianna M Van Deerlin Robert H Brown Leonard H van den Berg Jan H Veldink Matthew B Harms Jonathan D Glass David J Stone Pentti Tienari Vincenzo Silani Adriano Chiò Christopher E Shaw Bryan J Traynor John E Landers

Neuron 2018 03;97(6):1268-1283.e6

Department of Neurology, University of Massachusetts Medical School, Worcester, MA 01605, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2018.02.027DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5867896PMC
March 2018

RNA-seq Data: Challenges in and Recommendations for Experimental Design and Analysis.

Curr Protoc Hum Genet 2014 Oct 1;83:11.13.1-20. Epub 2014 Oct 1.

Gladstone Institute of Cardiovascular Disease, San Francisco, California.

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http://dx.doi.org/10.1002/0471142905.hg1113s83DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4230301PMC
October 2014

Development of DNA confirmatory and high-risk diagnostic testing for newborns using targeted next-generation DNA sequencing.

Genet Med 2015 May 25;17(5):337-47. Epub 2014 Sep 25.

1] Parabase Genomics, Boston, Massachusetts, USA [2] Division of Genetics, Department of Pediatrics, Medical University of South Carolina, Charleston, South Carolina, USA.

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http://dx.doi.org/10.1038/gim.2014.117DOI Listing
May 2015

The human TUT1 nucleotidyl transferase as a global regulator of microRNA abundance.

PLoS One 2013 18;8(7):e69630. Epub 2013 Jul 18.

Human Biology Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0069630PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3715485PMC
February 2014

Methods for obtaining and analyzing whole chloroplast genome sequences.

Methods Enzymol 2005 ;395:348-84

Section of Integrative Biology, The University of Texas at Austin, Institute of Cellular and Molecular Biology, Austin, Texas 78712-0253, USA.

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http://dx.doi.org/10.1016/S0076-6879(05)95020-9DOI Listing
August 2005

Automatic annotation of organellar genomes with DOGMA.

Bioinformatics 2004 Nov 4;20(17):3252-5. Epub 2004 Jun 4.

Department of Computer Sciences, Institute of Cellular and Molecular Biology, University of Texas at Austin, Austin, TX 78712, USA.

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http://dx.doi.org/10.1093/bioinformatics/bth352DOI Listing
November 2004