Sonia Davila

Sonia Davila

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Sonia Davila

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Draft Genome Sequence of Halomonas elongata MH25661 Isolated from a Saline Creek in the Andes of Peru.

Microbiol Resour Announc 2019 Jan 3;8(1). Epub 2019 Jan 3.

Departamento de Biología, Facultad de Ciencias, Universidad Nacional de San Antonio Abad del Cusco, Cusco, Peru.

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http://dx.doi.org/10.1128/MRA.00934-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6318351PMC
January 2019

Changes in H3K27ac following lipopolysaccharide stimulation of nasopharyngeal epithelial cells.

BMC Genomics 2018 Dec 27;19(1):969. Epub 2018 Dec 27.

Human Genetics, Genome Institute of Singapore, Singapore, 138672, Singapore.

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https://bmcgenomics.biomedcentral.com/articles/10.1186/s1286
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http://dx.doi.org/10.1186/s12864-018-5295-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6307289PMC
December 2018

Variation in Genome-Wide NF-κB RELA Binding Sites upon Microbial Stimuli and Identification of a Virus Response Profile.

J Immunol 2018 08 29;201(4):1295-1305. Epub 2018 Jun 29.

Department of Human Genetics, Genome Institute of Singapore, Singapore 138672, Singapore;

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http://dx.doi.org/10.4049/jimmunol.1800246DOI Listing
August 2018

HPV Could be a Potential Factor of Survival in Laryngeal Cancer: a Preliminary Study in Mexican Patients

Asian Pac J Cancer Prev 2018 Jun 25;19(6):1711-1716. Epub 2018 Jun 25.

Centro de Investigación en Dinamica Celular, Universidad Autonoma del Estado de Morelos, Cuernavaca , Mexico. Email:

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http://dx.doi.org/10.22034/APJCP.2018.19.6.1711DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6103592PMC
June 2018

The CRISPR-Cas system in Enterobacteriaceae.

Pathog Dis 2018 02;76(1)

Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Cuernavaca, Morelos 62210, México.

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http://dx.doi.org/10.1093/femspd/fty002DOI Listing
February 2018

Genetic association study of exfoliation syndrome identifies a protective rare variant at LOXL1 and five new susceptibility loci.

Authors:
Tin Aung Mineo Ozaki Mei Chin Lee Ursula Schlötzer-Schrehardt Gudmar Thorleifsson Takanori Mizoguchi Robert P Igo Aravind Haripriya Susan E Williams Yury S Astakhov Andrew C Orr Kathryn P Burdon Satoko Nakano Kazuhiko Mori Khaled Abu-Amero Michael Hauser Zheng Li Gopalakrishnan Prakadeeswari Jessica N Cooke Bailey Alina Popa Cherecheanu Jae H Kang Sarah Nelson Ken Hayashi Shin-Ichi Manabe Shigeyasu Kazama Tomasz Zarnowski Kenji Inoue Murat Irkec Miguel Coca-Prados Kazuhisa Sugiyama Irma Järvelä Patricio Schlottmann S Fabian Lerner Hasnaa Lamari Yildirim Nilgün Mukharram Bikbov Ki Ho Park Soon Cheol Cha Kenji Yamashiro Juan C Zenteno Jost B Jonas Rajesh S Kumar Shamira A Perera Anita S Y Chan Nino Kobakhidze Ronnie George Lingam Vijaya Tan Do Deepak P Edward Lourdes de Juan Marcos Mohammad Pakravan Sasan Moghimi Ryuichi Ideta Daniella Bach-Holm Per Kappelgaard Barbara Wirostko Samuel Thomas Daniel Gaston Karen Bedard Wenda L Greer Zhenglin Yang Xueyi Chen Lulin Huang Jinghong Sang Hongyan Jia Liyun Jia Chunyan Qiao Hui Zhang Xuyang Liu Bowen Zhao Ya-Xing Wang Liang Xu Stéphanie Leruez Pascal Reynier George Chichua Sergo Tabagari Steffen Uebe Matthias Zenkel Daniel Berner Georg Mossböck Nicole Weisschuh Ursula Hoja Ulrich-Christoph Welge-Luessen Christian Mardin Panayiota Founti Anthi Chatzikyriakidou Theofanis Pappas Eleftherios Anastasopoulos Alexandros Lambropoulos Arkasubhra Ghosh Rohit Shetty Natalia Porporato Vijayan Saravanan Rengaraj Venkatesh Chandrashekaran Shivkumar Narendran Kalpana Sripriya Sarangapani Mozhgan R Kanavi Afsaneh Naderi Beni Shahin Yazdani Alireza Lashay Homa Naderifar Nassim Khatibi Antonio Fea Carlo Lavia Laura Dallorto Teresa Rolle Paolo Frezzotti Daniela Paoli Erika Salvi Paolo Manunta Yosai Mori Kazunori Miyata Tomomi Higashide Etsuo Chihara Satoshi Ishiko Akitoshi Yoshida Masahide Yanagi Yoshiaki Kiuchi Tsutomu Ohashi Toshiya Sakurai Takako Sugimoto Hideki Chuman Makoto Aihara Masaru Inatani Masahiro Miyake Norimoto Gotoh Fumihiko Matsuda Nagahisa Yoshimura Yoko Ikeda Morio Ueno Chie Sotozono Jin Wook Jeoung Min Sagong Kyu Hyung Park Jeeyun Ahn Marisa Cruz-Aguilar Sidi M Ezzouhairi Abderrahman Rafei Yaan Fun Chong Xiao Yu Ng Shuang Ru Goh Yueming Chen Victor H K Yong Muhammad Imran Khan Olusola O Olawoye Adeyinka O Ashaye Idakwo Ugbede Adeola Onakoya Nkiru Kizor-Akaraiwe Chaiwat Teekhasaenee Yanin Suwan Wasu Supakontanasan Suhanya Okeke Nkechi J Uche Ifeoma Asimadu Humaira Ayub Farah Akhtar Ewa Kosior-Jarecka Urszula Lukasik Ignacio Lischinsky Vania Castro Rodolfo Perez Grossmann Gordana Sunaric Megevand Sylvain Roy Edward Dervan Eoin Silke Aparna Rao Priti Sahay Pablo Fornero Osvaldo Cuello Delia Sivori Tamara Zompa Richard A Mills Emmanuelle Souzeau Paul Mitchell Jie Jin Wang Alex W Hewitt Michael Coote Jonathan G Crowston Sergei Y Astakhov Eugeny L Akopov Anton Emelyanov Vera Vysochinskaya Gyulli Kazakbaeva Rinat Fayzrakhmanov Saleh A Al-Obeidan Ohoud Owaidhah Leyla Ali Aljasim Balram Chowbay Jia Nee Foo Raphael Q Soh Kar Seng Sim Zhicheng Xie Augustine W O Cheong Shi Qi Mok Hui Meng Soo Xiao Yin Chen Su Qin Peh Khai Koon Heng Rahat Husain Su-Ling Ho Axel M Hillmer Ching-Yu Cheng Francisco A Escudero-Domínguez Rogelio González-Sarmiento Frederico Martinon-Torres Antonio Salas Kessara Pathanapitoon Linda Hansapinyo Boonsong Wanichwecharugruang Naris Kitnarong Anavaj Sakuntabhai Hip X Nguyn Giang T T Nguyn Trình V Nguyn Werner Zenz Alexander Binder Daniela S Klobassa Martin L Hibberd Sonia Davila Stefan Herms Markus M Nöthen Susanne Moebus Robyn M Rautenbach Ari Ziskind Trevor R Carmichael Michele Ramsay Lydia Álvarez Montserrat García Héctor González-Iglesias Pedro P Rodríguez-Calvo Luis Fernández-Vega Cueto Çilingir Oguz Nevbahar Tamcelik Eray Atalay Bilge Batu Dilek Aktas Burcu Kasım M Roy Wilson Anne L Coleman Yutao Liu Pratap Challa Leon Herndon Rachel W Kuchtey John Kuchtey Karen Curtin Craig J Chaya Alan Crandall Linda M Zangwill Tien Yin Wong Masakazu Nakano Shigeru Kinoshita Anneke I den Hollander Eija Vesti John H Fingert Richard K Lee Arthur J Sit Bradford J Shingleton Ningli Wang Daniele Cusi Raheel Qamar Peter Kraft Margaret A Pericak-Vance Soumya Raychaudhuri Steffen Heegaard Tero Kivelä André Reis Friedrich E Kruse Robert N Weinreb Louis R Pasquale Jonathan L Haines Unnur Thorsteinsdottir Fridbert Jonasson R Rand Allingham Dan Milea Robert Ritch Toshiaki Kubota Kei Tashiro Eranga N Vithana Shazia Micheal Fotis Topouzis Jamie E Craig Michael Dubina Periasamy Sundaresan Kari Stefansson Janey L Wiggs Francesca Pasutto Chiea Chuen Khor

Nat Genet 2017 07 29;49(7):993-1004. Epub 2017 May 29.

Singapore Eye Research Institute, Singapore.

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http://dx.doi.org/10.1038/ng.3875DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6685441PMC
July 2017

Inclusion of Population-specific Reference Panel from India to the 1000 Genomes Phase 3 Panel Improves Imputation Accuracy.

Sci Rep 2017 07 27;7(1):6733. Epub 2017 Jul 27.

Genomic Research on Complex diseases (GRC Group), CSIR-Centre for Cellular and Molecular Biology, Hyderabad, Telangana, 500 007, India.

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http://dx.doi.org/10.1038/s41598-017-06905-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532257PMC
July 2017

Association Between Telomere Length and Risk of Cancer and Non-Neoplastic Diseases: A Mendelian Randomization Study.

Authors:
Philip C Haycock Stephen Burgess Aayah Nounu Jie Zheng George N Okoli Jack Bowden Kaitlin Hazel Wade Nicholas J Timpson David M Evans Peter Willeit Abraham Aviv Tom R Gaunt Gibran Hemani Massimo Mangino Hayley Patricia Ellis Kathreena M Kurian Karen A Pooley Rosalind A Eeles Jeffrey E Lee Shenying Fang Wei V Chen Matthew H Law Lisa M Bowdler Mark M Iles Qiong Yang Bradford B Worrall Hugh Stephen Markus Rayjean J Hung Chris I Amos Amanda B Spurdle Deborah J Thompson Tracy A O'Mara Brian Wolpin Laufey Amundadottir Rachael Stolzenberg-Solomon Antonia Trichopoulou N Charlotte Onland-Moret Eiliv Lund Eric J Duell Federico Canzian Gianluca Severi Kim Overvad Marc J Gunter Rosario Tumino Ulrika Svenson Andre van Rij Annette F Baas Matthew J Bown Nilesh J Samani Femke N G van t'Hof Gerard Tromp Gregory T Jones Helena Kuivaniemi James R Elmore Mattias Johansson James Mckay Ghislaine Scelo Robert Carreras-Torres Valerie Gaborieau Paul Brennan Paige M Bracci Rachel E Neale Sara H Olson Steven Gallinger Donghui Li Gloria M Petersen Harvey A Risch Alison P Klein Jiali Han Christian C Abnet Neal D Freedman Philip R Taylor John M Maris Katja K Aben Lambertus A Kiemeney Sita H Vermeulen John K Wiencke Kyle M Walsh Margaret Wrensch Terri Rice Clare Turnbull Kevin Litchfield Lavinia Paternoster Marie Standl Gonçalo R Abecasis John Paul SanGiovanni Yong Li Vladan Mijatovic Yadav Sapkota Siew-Kee Low Krina T Zondervan Grant W Montgomery Dale R Nyholt David A van Heel Karen Hunt Dan E Arking Foram N Ashar Nona Sotoodehnia Daniel Woo Jonathan Rosand Mary E Comeau W Mark Brown Edwin K Silverman John E Hokanson Michael H Cho Jennie Hui Manuel A Ferreira Philip J Thompson Alanna C Morrison Janine F Felix Nicholas L Smith Angela M Christiano Lynn Petukhova Regina C Betz Xing Fan Xuejun Zhang Caihong Zhu Carl D Langefeld Susan D Thompson Feijie Wang Xu Lin David A Schwartz Tasha Fingerlin Jerome I Rotter Mary Frances Cotch Richard A Jensen Matthias Munz Henrik Dommisch Arne S Schaefer Fang Han Hanna M Ollila Ryan P Hillary Omar Albagha Stuart H Ralston Chenjie Zeng Wei Zheng Xiao-Ou Shu Andre Reis Steffen Uebe Ulrike Hüffmeier Yoshiya Kawamura Takeshi Otowa Tsukasa Sasaki Martin Lloyd Hibberd Sonia Davila Gang Xie Katherine Siminovitch Jin-Xin Bei Yi-Xin Zeng Asta Försti Bowang Chen Stefano Landi Andre Franke Annegret Fischer David Ellinghaus Carlos Flores Imre Noth Shwu-Fan Ma Jia Nee Foo Jianjun Liu Jong-Won Kim David G Cox Olivier Delattre Olivier Mirabeau Christine F Skibola Clara S Tang Merce Garcia-Barcelo Kai-Ping Chang Wen-Hui Su Yu-Sun Chang Nicholas G Martin Scott Gordon Tracey D Wade Chaeyoung Lee Michiaki Kubo Pei-Chieng Cha Yusuke Nakamura Daniel Levy Masayuki Kimura Shih-Jen Hwang Steven Hunt Tim Spector Nicole Soranzo Ani W Manichaikul R Graham Barr Bratati Kahali Elizabeth Speliotes Laura M Yerges-Armstrong Ching-Yu Cheng Jost B Jonas Tien Yin Wong Isabella Fogh Kuang Lin John F Powell Kenneth Rice Caroline L Relton Richard M Martin George Davey Smith

JAMA Oncol 2017 May;3(5):636-651

MRC Integrative Epidemiology Unit, University of Bristol, Bristol, England2School of Social and Community Medicine, University of Bristol, Bristol, England.

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http://dx.doi.org/10.1001/jamaoncol.2016.5945DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5638008PMC
May 2017

Personalized genome sequencing coupled with iPSC technology identifies GTDC1 as a gene involved in neurodevelopmental disorders.

Hum Mol Genet 2017 01;26(2):367-382

Stem Cell and Regenerative Biology, Genome Institute of Singapore, 60 Biopolis St, Singapore.

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http://dx.doi.org/10.1093/hmg/ddw393DOI Listing
January 2017

Predictive Factors for BRCA1 and BRCA2 Genetic Testing in an Asian Clinic-Based Population.

PLoS One 2015 29;10(7):e0134408. Epub 2015 Jul 29.

Division of Medical Sciences, Humphrey Oei Institute of Cancer Research, National Cancer Centre, Singapore, Singapore; Department of Physiology, Yong Yoo Lin School of Medicine, National University of Singapore, Singapore, Singapore; Office of Clinical and Academic Faculty Affairs, Duke-NUS Graduate Medical School, Singapore, Singapore.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0134408PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4519264PMC
May 2016

An Immunochip-based interaction study of contrasting interaction effects with smoking in ACPA-positive versus ACPA-negative rheumatoid arthritis.

Rheumatology (Oxford) 2016 Jan 13;55(1):149-55. Epub 2015 Aug 13.

The Institute of Environmental Medicine, Karolinska Institute, Stockholm, Centre for Occupational and Environmental Medicine, Stockholm County Council, Stockholm, Sweden.

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http://dx.doi.org/10.1093/rheumatology/kev285DOI Listing
January 2016

Corrigendum: New loci and coding variants confer risk for age-related macular degeneration in East Asians.

Nat Commun 2015 Mar 30;6:6817. Epub 2015 Mar 30.

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http://dx.doi.org/10.1038/ncomms7817DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4400603PMC
March 2015

Electrostatic analysis of bacterial expansins.

Proteins 2015 Feb 28;83(2):215-23. Epub 2014 Nov 28.

Facultad de Ciencias, Universidad Autónoma del Estado de Morelos, Cuernavaca, 62209, Morelos, México.

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http://doi.wiley.com/10.1002/prot.24718
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http://dx.doi.org/10.1002/prot.24718DOI Listing
February 2015

New loci and coding variants confer risk for age-related macular degeneration in East Asians.

Nat Commun 2015 Jan 28;6:6063. Epub 2015 Jan 28.

1] Singapore Eye Research Institute, Singapore 169856, Singapore [2] Division of Human Genetics, Genome Institute of Singapore, Singapore 138672, Singapore [3] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore 117549, Singapore.

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http://dx.doi.org/10.1038/ncomms7063DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4317498PMC
January 2015

Impaired development of neural-crest cell-derived organs and intellectual disability caused by MED13L haploinsufficiency.

Hum Mutat 2014 Nov 23;35(11):1311-20. Epub 2014 Sep 23.

Human Genetics, Genome Institute of Singapore, Singapore, 138672; Department of Paediatrics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, 117597.

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http://dx.doi.org/10.1002/humu.22636DOI Listing
November 2014

Exome sequencing in developmental eye disease leads to identification of causal variants in GJA8, CRYGC, PAX6 and CYP1B1.

Eur J Hum Genet 2014 Jul 27;22(7):907-15. Epub 2013 Nov 27.

1] Eye and Developmental Genetics Research Group, Western Sydney Genetics Program, The Children's Hospital at Westmead, Sydney, NSW, Australia [2] Children's Medical Research Institute, Sydney, NSW, Australia [3] Discipline of Ophthalmology and Save Sight Institute, University of Sydney, Sydney, NSW, Australia [4] Disciplines of Paediatrics and Child Health and Genetic Medicine, University of Sydney, Sydney, NSW, Australia.

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http://dx.doi.org/10.1038/ejhg.2013.268DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4060118PMC
July 2014

Disruption of vascular homeostasis in patients with Kawasaki disease: involvement of vascular endothelial growth factor and angiopoietins.

Arthritis Rheum 2012 Jan;64(1):306-15

Emma Children's Hospital, Academic Medical Center, and Sanquin Research and Landsteiner Laboratory, University of Amsterdam, Amsterdam, The Netherlands.

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http://doi.wiley.com/10.1002/art.33316
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http://dx.doi.org/10.1002/art.33316DOI Listing
January 2012

Genome-wide association studies are coming for human infectious diseases.

Genome Med 2009 Feb 10;1(2):19. Epub 2009 Feb 10.

Genome Institute of Singapore, Infectious Diseases, 60 Biopolis Street, 138672 Singapore.

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http://dx.doi.org/10.1186/gm19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2664952PMC
February 2009

Effect of three different cultivars of Lepidium meyenii (Maca) on learning and depression in ovariectomized mice.

BMC Complement Altern Med 2006 Jun 23;6:23. Epub 2006 Jun 23.

Department of Biological and Physiological Sciences, Faculty of Sciences and Philosophy and Instituto de Investigaciones de la Altura, Universidad Peruana Cayetano Heredia, Lima, Peru.

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http://dx.doi.org/10.1186/1472-6882-6-23DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1534053PMC
June 2006

The mitochondrial genome sequence of the scorpion Centruroides limpidus (Karsch 1879) (Chelicerata; Arachnida).

Gene 2005 Nov 23;360(2):92-102. Epub 2005 Sep 23.

Programa de Genómica Evolutiva, Centro de Ciencias Genómicas - UNAM, Avenida Universidad, s/n, Chamilpa, Cuernavaca 62210, Apartado Postal 565-A, Morelos, Mexico.

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http://dx.doi.org/10.1016/j.gene.2005.06.008DOI Listing
November 2005

Mutations in SEC63 cause autosomal dominant polycystic liver disease.

Nat Genet 2004 Jun 9;36(6):575-7. Epub 2004 May 9.

Department of Internal Medicine, Yale University School of Medicine, P.O. Box 208029, 333 Cedar Street, New Haven, Connecticut 06520-8029, USA.

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http://dx.doi.org/10.1038/ng1357DOI Listing
June 2004

Biochemical, genetic and physiological characterization of venom components from two species of scorpions: Centruroides exilicauda Wood and Centruroides sculpturatus Ewing.

Biochimie 2004 Jun;86(6):387-96

Department of Molecular Medicine and Bioprocesses, Institute of Biotechnology, National Autonomous University of Mexico, Avenida Universidad 2001, Apartado Postal 510-3, Cuernavaca 62210, Mexico.

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http://dx.doi.org/10.1016/j.biochi.2004.05.005DOI Listing
June 2004

Mutations in PRKCSH cause isolated autosomal dominant polycystic liver disease.

Am J Hum Genet 2003 Mar 15;72(3):691-703. Epub 2003 Jan 15.

Department of Internal Medicine, Yale University School of Medicine, New Haven, CT 06519, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S000292970760584
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http://dx.doi.org/10.1086/368295DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1180260PMC
March 2003

Clinical profile of autosomal dominant polycystic liver disease.

Hepatology 2003 Jan;37(1):164-71

Division of Nephrology, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1053/jhep.2003.50006DOI Listing
January 2003