Simona Bianco

Simona Bianco

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Simona Bianco

Simona Bianco

Publications by authors named "Simona Bianco"

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Higher-order Chromosome Structures Investigated by Polymer Physics in Cellular Morphogenesis and Differentiation.

J Mol Biol 2019 Dec 18. Epub 2019 Dec 18.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo, 80126, Naples, Italy. Electronic address:

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http://dx.doi.org/10.1016/j.jmb.2019.12.017DOI Listing
December 2019

Inference of chromosome 3D structures from GAM data by a physics computational approach.

Methods 2019 Oct 8. Epub 2019 Oct 8.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo, 80126 Naples, Italy; Berlin Institute of Health (BIH), MDC-Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.ymeth.2019.09.018DOI Listing
October 2019

Modeling Single-Molecule Conformations of the HoxD Region in Mouse Embryonic Stem and Cortical Neuronal Cells.

Cell Rep 2019 Aug;28(6):1574-1583.e4

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo, 80126 Naples, Italy; Berlin Institute for Medical Systems Biology, Max-Delbrück Centre (MDC) for Molecular Medicine, Robert-Rössle Straße, Berlin-Buch 13125, Germany; Berlin Institute of Health (BIH), MDC-Berlin, Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.07.013DOI Listing
August 2019

Models of polymer physics for the architecture of the cell nucleus.

Wiley Interdiscip Rev Syst Biol Med 2019 Jul 19;11(4):e1444. Epub 2018 Dec 19.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli Complesso Universitario di Monte Sant'Angelo, Naples, Italy.

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http://dx.doi.org/10.1002/wsbm.1444DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6565494PMC
July 2019

[Efficacy of SUPRA HFR in the treatment of acute renal damage during multiple myeloma].

G Ital Nefrol 2018 Dec;35(6)

S.C. Nefrologia, Dialisi e Trapianto U. AOU Città della Salute e della Scienza di Torino, Torino, Italia.

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December 2018

Molecular Dynamics simulations of the Strings and Binders Switch model of chromatin.

Methods 2018 06 6;142:81-88. Epub 2018 Mar 6.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, Complesso Universitario di Monte Sant'Angelo, 80126 Naples, Italy; Berlin Institute of Health (BIH), MDC-Berlin, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.ymeth.2018.02.024DOI Listing
June 2018

Polymer physics predicts the effects of structural variants on chromatin architecture.

Nat Genet 2018 05 16;50(5):662-667. Epub 2018 Apr 16.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, Complesso di Monte Sant'Angelo, Naples, Italy.

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http://dx.doi.org/10.1038/s41588-018-0098-8DOI Listing
May 2018

Polymer Physics of the Large-Scale Structure of Chromatin.

Methods Mol Biol 2016 ;1480:201-6

Dipartimento di Fisica, Università di Napoli Federico II, INFN, SPIN-CNR, Complesso Universitario di Monte S.Angelo, via Cintia, Naples, 80126, Italy.

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http://dx.doi.org/10.1007/978-1-4939-6380-5_17DOI Listing
January 2018

Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells.

Nat Struct Mol Biol 2017 Jun 24;24(6):515-524. Epub 2017 Apr 24.

Epigenetic Regulation and Chromatin Architecture Group, Berlin Institute for Medical Systems Biology, Max Delbrück Centre for Molecular Medicine, Berlin, Germany.

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http://dx.doi.org/10.1038/nsmb.3402DOI Listing
June 2017

Predicting chromatin architecture from models of polymer physics.

Chromosome Res 2017 03 9;25(1):25-34. Epub 2017 Jan 9.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, CNR-SPIN, Complesso Universitario di Monte Sant'Angelo, 80126, Naples, Italy.

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http://dx.doi.org/10.1007/s10577-016-9545-5DOI Listing
March 2017

Polymer models of the hierarchical folding of the Hox-B chromosomal locus.

Phys Rev E 2016 Oct 4;94(4-1):042402. Epub 2016 Oct 4.

Dipartimento di Fisica, Universitá di Napoli Federico II, INFN Napoli, CNR, SPIN, Complesso Universitario di Monte Sant'Angelo, 80126 Naples, Italy.

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http://dx.doi.org/10.1103/PhysRevE.94.042402DOI Listing
October 2016

Polymer physics of chromosome large-scale 3D organisation.

Sci Rep 2016 07 13;6:29775. Epub 2016 Jul 13.

Dipartimento di Fisica, Università di Napoli Federico II, and INFN Napoli, CNR-SPIN, Complesso Universitario di Monte Sant'Angelo, 80126 Naples, Italy.

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http://dx.doi.org/10.1038/srep29775DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4942835PMC
July 2016

Survey of phenotypic and genetic features of streptococcus pyogenes strains isolated in Northwest Italy.

Curr Microbiol 2006 Jan 26;52(1):33-9. Epub 2005 Dec 26.

Dipartimento di Scienze Cliniche e Biologiche, Università di Torino, c/o Ospedale S. Luigi Gonzaga, Regione Gonzole, 10043 Orbassano (TO), Italy.

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http://dx.doi.org/10.1007/s00284-005-0067-1DOI Listing
January 2006