Sikander Hayat

Sikander Hayat

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Sikander Hayat

Sikander Hayat

Publications by authors named "Sikander Hayat"

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17Publications

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Evaluation of colorectal cancer subtypes and cell lines using deep learning.

Life Sci Alliance 2019 12 2;2(6). Epub 2019 Dec 2.

Max-Delbrück-Centrum für Molekulare Medizin, BIMSB, Berlin, Germany

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http://dx.doi.org/10.26508/lsa.201900517DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6892438PMC
December 2019

Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins.

Bioinformatics 2016 05 21;32(10):1571-3. Epub 2016 Jan 21.

Stockholm Bioinformatics Center, SciLifeLab, Swedish E-Science Research Center, Stockholm University, Stockholm, SE, 10691, Sweden and.

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http://dx.doi.org/10.1093/bioinformatics/btw025DOI Listing
May 2016

Molecular architecture of the active mitochondrial protein gate.

Science 2015 Sep;349(6255):1544-8

Department of Chemistry, Graduate School of Science, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan. Faculty of Life Sciences, Kyoto Sangyo University, Kamigamo-motoyama, Kita-ku, Kyoto 603-8555, Japan.

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http://dx.doi.org/10.1126/science.aac6428DOI Listing
September 2015

All-atom 3D structure prediction of transmembrane β-barrel proteins from sequences.

Proc Natl Acad Sci U S A 2015 Apr 9;112(17):5413-8. Epub 2015 Apr 9.

Science for Life Laboratory and Department of Biochemistry and Biophysics, Stockholm University, Stockholm 10691, Sweden

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http://dx.doi.org/10.1073/pnas.1419956112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4418893PMC
April 2015

PconsFold: improved contact predictions improve protein models.

Bioinformatics 2014 Sep;30(17):i482-8

Department of Biochemistry and Biophysics, Stockholm University, 10691 Stockholm, Sweden, Science for Life Laboratory, Stockholm University, Box 1031, 17121 Solna, Sweden, Department of Systems Biology, Harvard Medical School, Boston, MA, USA, Department of Information and Computer Science, Aalto University, PO Box 15400, FI-00076 Aalto, Finland and Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA Department of Biochemistry and Biophysics, Stockholm University, 10691 Stockholm, Sweden, Science for Life Laboratory, Stockholm University, Box 1031, 17121 Solna, Sweden, Department of Systems Biology, Harvard Medical School, Boston, MA, USA, Department of Information and Computer Science, Aalto University, PO Box 15400, FI-00076 Aalto, Finland and Computational Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu458DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147911PMC
September 2014

Ranking models of transmembrane β-barrel proteins using Z-coordinate predictions.

Bioinformatics 2012 Jun;28(12):i90-6

Center for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm Bioinformatics Center, Science for Life Laboratory, Swedish E-science Research Center, Stockholm University, SE-10691 Stockholm, Sweden.

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http://dx.doi.org/10.1093/bioinformatics/bts233DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3371865PMC
June 2012

Comparative evaluation of some commercially available brands of pharmaceutical preparations for Na, K and Mg concentrations.

Pak J Pharm Sci 2012 Apr;25(2):377-80

Department of Chemistry, Bahauddin Zakariya University, Multan, Pakistan.

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April 2012

BOCTOPUS: improved topology prediction of transmembrane β barrel proteins.

Bioinformatics 2012 Feb 13;28(4):516-22. Epub 2012 Jan 13.

Center for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm Bioinformatics Center, SciLifeLab, Swedish E-science Research Center, Stockholm University, SE-10691 Stockholm, Sweden.

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http://dx.doi.org/10.1093/bioinformatics/btr710DOI Listing
February 2012

Statistical analysis and exposure status classification of transmembrane beta barrel residues.

Comput Biol Chem 2011 Apr 30;35(2):96-107. Epub 2011 Mar 30.

Center for Bioinformatics, Saarland University, Saarbruecken, Germany.

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http://dx.doi.org/10.1016/j.compbiolchem.2011.03.002DOI Listing
April 2011

Prediction of the exposure status of transmembrane beta barrel residues from protein sequence.

J Bioinform Comput Biol 2011 Feb;9(1):43-65

Center for Bioinformatics, Saarland University, Germany.

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http://dx.doi.org/10.1142/s0219720011005240DOI Listing
February 2011

[Applications of external fixation for management of complications associated with musculoskeletal tumors and related surgery].

Acta Orthop Traumatol Turc 2009 May-Jul;43(3):219-28

Department of Orthopedics and Traumatology, Istanbul Medicine Faculty of Istanbul University, Istanbul, Turkey.

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http://dx.doi.org/10.3944/AOTT.2009.219DOI Listing
March 2010

Prediction of the burial status of transmembrane residues of helical membrane proteins.

BMC Bioinformatics 2007 Aug 20;8:302. Epub 2007 Aug 20.

Center for Bioinformatics, Saarland University, 66041 Saarbruecken, Germany.

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http://dx.doi.org/10.1186/1471-2105-8-302DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2000914PMC
August 2007