Publications by authors named "Siddhartha Mitra"

65Publications

Photolability of pyrogenic dissolved organic matter from a thermal series of laboratory-prepared chars.

Sci Total Environ 2020 Jul 27;724:138198. Epub 2020 Mar 27.

School of Marine Science and Policy, College of Earth, Ocean, and Environment, University of Delaware, Lewes, DE, United States.

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http://dx.doi.org/10.1016/j.scitotenv.2020.138198DOI Listing
July 2020

Irradiation or temozolomide chemotherapy enhances anti-CD47 treatment of glioblastoma.

Innate Immun 2020 02 23;26(2):130-137. Epub 2019 Sep 23.

Division of Pediatric Neurosurgery, Department of Neurosurgery, Lucile Packard Children's Hospital, Stanford University School of Medicine, USA.

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http://dx.doi.org/10.1177/1753425919876690DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7016411PMC
February 2020

Refractory organic matter in coastal salt marshes-effect on C sequestration calculations.

Sci Total Environ 2018 Aug 28;633:391-398. Epub 2018 Mar 28.

Department of Geological Sciences, East Carolina University, Graham Building, Room 101, Greenville, NC 27858-4353, USA. Electronic address:

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http://dx.doi.org/10.1016/j.scitotenv.2018.03.120DOI Listing
August 2018

A Hematogenous Route for Medulloblastoma Leptomeningeal Metastases.

Cell 2018 02;172(5):1050-1062.e14

Developmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, ON, Canada; The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, ON, Canada; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada; Division of Neurosurgery, The Hospital for Sick Children, Toronto, ON, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2018.01.038DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6346737PMC
February 2018

Identification of a Brainstem Circuit Controlling Feeding.

Cell 2017 Jul;170(3):429-442.e11

Laboratory of Molecular Genetics, Howard Hughes Medical Institute, The Rockefeller University, New York, NY 10065, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2017.06.045DOI Listing
July 2017

The anti-hypertensive drug prazosin inhibits glioblastoma growth via the PKCδ-dependent inhibition of the AKT pathway.

EMBO Mol Med 2016 05 2;8(5):511-26. Epub 2016 May 2.

INSERM, UMR-S 1130, Neuroscience Paris Seine-IBPS, Paris, France CNRS, UMR 8246, Neuroscience Paris Seine-IBPS, Paris, France Sorbonne Universités, UPMC Université Paris 06, UMR-S 8246, Neuroscience Paris Seine-IBPS, Paris, France

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http://dx.doi.org/10.15252/emmm.201505421DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5130115PMC
May 2016

Neural Placode Tissue Derived From Myelomeningocele Repair Serves as a Viable Source of Oligodendrocyte Progenitor Cells.

Neurosurgery 2015 Nov;77(5):794-802; discussion 802

‡Institute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, California; §Department of Neurosurgery, Lucile Packard Children's Hospital, Stanford University School of Medicine, Stanford, California; ¶Department of Neurosurgery, VA Palo Alto Health Care System, Stanford University School of Medicine, Palo Alto, California; ∥Department of Neurological Surgery, University of Washington, Seattle, Washington.

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http://dx.doi.org/10.1227/NEU.0000000000000918DOI Listing
November 2015

Neuronal Activity Promotes Glioma Growth through Neuroligin-3 Secretion.

Cell 2015 May 23;161(4):803-16. Epub 2015 Apr 23.

Department of Neurology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Pediatrics, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Neurosurgery, Stanford University School of Medicine, Stanford, CA 94305, USA; Institute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address:

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http://www.cell.com/cell/pdf/S0092-8674(15)00429-8.pdf
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http://linkinghub.elsevier.com/retrieve/pii/S009286741500429
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http://dx.doi.org/10.1016/j.cell.2015.04.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447122PMC
May 2015

Glioblastoma stem cells and stem cell-targeting immunotherapies.

J Neurooncol 2015 Jul 15;123(3):449-57. Epub 2015 Feb 15.

Division of Pediatric Neurosurgery, Department of Neurosurgery, Lucile Packard Children's Hospital, Stanford University School of Medicine, 300 Pasteur Drive R211, Stanford, CA, 94305, USA,

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http://dx.doi.org/10.1007/s11060-015-1729-xDOI Listing
July 2015

Macrophages eat cancer cells using their own calreticulin as a guide: roles of TLR and Btk.

Proc Natl Acad Sci U S A 2015 Feb 2;112(7):2145-50. Epub 2015 Feb 2.

Institute for Stem Cell Biology and Regenerative Medicine, Ludwig Center for Cancer Stem Cell Research and Medicine, Stanford Cancer Institute, and Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305

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http://dx.doi.org/10.1073/pnas.1424907112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4343163PMC
February 2015

Epigenetic targeting of Hedgehog pathway transcriptional output through BET bromodomain inhibition.

Nat Med 2014 Jul 29;20(7):732-40. Epub 2014 Jun 29.

1] Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. [2] Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. [3] Stanford Cancer Institute, Stanford University Medical Center, Stanford, California, USA.

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http://atwoodlab.com/pdfs/tang_natmed_2014.pdf
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http://escholarship.org/uc/item/25h3g2vb.pdf
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http://www.nature.com/doifinder/10.1038/nm.3613
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http://dx.doi.org/10.1038/nm.3613DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108909PMC
July 2014

Detection of pharmaceuticals and other personal care products in groundwater beneath and adjacent to onsite wastewater treatment systems in a coastal plain shallow aquifer.

Sci Total Environ 2014 Jul 3;487:216-23. Epub 2014 May 3.

East Carolina University, Department of Geological Sciences, 101 Graham Building, Greenville, NC 27858, United States. Electronic address:

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http://dx.doi.org/10.1016/j.scitotenv.2014.03.135DOI Listing
July 2014

Nitrogen and carbon dynamics beneath on-site wastewater treatment systems in Pitt County, North Carolina.

Water Sci Technol 2014 ;69(3):663-71

Department of Geological Sciences, East Carolina University, 204 Graham Building, Greenville, NC 27858, USA.

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http://dx.doi.org/10.2166/wst.2013.765DOI Listing
April 2014

Targeting a glioblastoma cancer stem-cell population defined by EGF receptor variant III.

Cancer Res 2014 Feb 23;74(4):1238-49. Epub 2013 Dec 23.

Authors' Affiliations: Brain Tumor Research Laboratories, Program in Cancer Biology, Stanford University Medical Center, Stanford; Department of Pathology, Stanford University Medical Center, Stanford; Institute of Stem Cell Biology and Regenerative Medicine, Stanford University Medical Center, Stanford; Department of Neurosurgery, Stanford University School of Medicine, Stanford; Veterans Affairs Palo Alto Health Care System, Palo Alto, California; Department of Physiology and Pharmacology, Institute for Biomedical Research, School of Medicine, University of Salamanca, Salamanca, Spain; Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, Massachusetts; and Department of Gastroenterology, Henan Provincial People's Hospital, Zhengzhou, Henan, People's Republic of China.

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http://dx.doi.org/10.1158/0008-5472.CAN-13-1407DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5661963PMC
February 2014

BET bromodomain inhibition of MYC-amplified medulloblastoma.

Clin Cancer Res 2014 Feb 2;20(4):912-25. Epub 2013 Dec 2.

Authors' Affiliations: Departments of Cancer Biology and Medical Oncology, Dana-Farber Cancer Institute and Harvard Medical School; Pediatric Neuro-Oncology, Department of Pediatric Oncology, Dana-Farber Cancer Institute and Division of Pediatric Hematology/Oncology, Boston Children's Hospital; Center for Cancer Genome Characterization, Dana-Farber Cancer Institute, Boston; The Broad Institute of MIT and Harvard, Cambridge, Massachusetts; Departments of Neurology and Neurological Sciences and Neurosurgery, Stanford University School of Medicine; Stanford Cancer Institute, Stanford University Medical Center, Stanford; Tumor Initiation and Maintenance Program, NCI-Designated Cancer Center, Sanford-Burnham Medical Research Institute, La Jolla; Department of Neurology, Pediatrics, and Neurosurgery, University of California, San Francisco, California; and Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.

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http://clincancerres.aacrjournals.org/content/20/4/912.full.
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http://clincancerres.aacrjournals.org/cgi/doi/10.1158/1078-0
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http://dx.doi.org/10.1158/1078-0432.CCR-13-2281DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4198154PMC
February 2014

A 700 year record of combustion-derived pollution in northern Spain: tools to identify the Holocene/Anthropocene transition in coastal environments.

Sci Total Environ 2014 Feb 15;470-471:240-7. Epub 2013 Oct 15.

Departamento de Estratigrafía y Paleontología, Facultad de Ciencia y Tecnología, Universidad del País Vasco UPV/EHU, Apartado 644, 48080 Bilbao, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.scitotenv.2013.09.064DOI Listing
February 2014

Usp16 contributes to somatic stem-cell defects in Down's syndrome.

Nature 2013 Sep 11;501(7467):380-4. Epub 2013 Sep 11.

Institute for Stem Cell Biology and Regenerative Medicine, Stanford University School of Medicine, Stanford, California 94305, USA.

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http://dx.doi.org/10.1038/nature12530DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3816928PMC
September 2013

Coregulation of multiple signaling mechanisms in pp60v-Src-induced closure of Cx43 gap junction channels.

J Membr Biol 2012 Aug 11;245(8):495-506. Epub 2012 Sep 11.

Department of Biochemistry, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229-3900, USA.

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http://dx.doi.org/10.1007/s00232-012-9500-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561471PMC
August 2012

Expression of epidermal growth factor variant III (EGFRvIII) in pediatric diffuse intrinsic pontine gliomas.

J Neurooncol 2012 Jul 2;108(3):395-402. Epub 2012 Mar 2.

Department of Neurosurgery, Stanford University Medical Center, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1007/s11060-012-0842-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368992PMC
July 2012

Heterogeneous reallocation of presynaptic efficacy in recurrent excitatory circuits adapting to inactivity.

Nat Neurosci 2011 Dec 18;15(2):250-7. Epub 2011 Dec 18.

Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, California, USA.

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http://dx.doi.org/10.1038/nn.3004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3558750PMC
December 2011

Hedgehog-responsive candidate cell of origin for diffuse intrinsic pontine glioma.

Proc Natl Acad Sci U S A 2011 Mar 1;108(11):4453-8. Epub 2011 Mar 1.

Department of Neurology, and Institute for Stem Cell Biology and Regenerative Medicine, Stanford University Medical Center, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1073/pnas.1101657108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3060250PMC
March 2011

Development of an EGFRvIII specific recombinant antibody.

BMC Biotechnol 2010 Oct 7;10:72. Epub 2010 Oct 7.

Brain Tumor Research Laboratories, Department of Neurosurgery, and Program in Cancer Biology, Stanford University Medical Center, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1186/1472-6750-10-72DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2959087PMC
October 2010

Pineal parenchymal tumor of intermediate differentiation: clinicopathological report and analysis of epidermal growth factor receptor variant III expression.

Neurosurgery 2010 May;66(5):963-8; discussion 968

Department of Neurosurgery, Stanford University School of Medicine, Stanford, California 94305, USA.

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http://dx.doi.org/10.1227/01.NEU.0000367726.49003.F1DOI Listing
May 2010

The epidermal growth factor variant III peptide vaccine for treatment of malignant gliomas.

Neurosurg Clin N Am 2010 Jan;21(1):87-93

Department of Neurosurgery, Stanford University School of Medicine, 300 Pasteur Drive, Edwards Building Room 213, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1016/j.nec.2009.08.004DOI Listing
January 2010

Passive antibody-mediated immunotherapy for the treatment of malignant gliomas.

Neurosurg Clin N Am 2010 Jan;21(1):67-76

Department of Neurosurgery, Stanford University School of Medicine, 300 Pasteur Drive, Edwards Building Room 200, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1016/j.nec.2009.08.010DOI Listing
January 2010

Protein turnover and inclusion body formation.

Autophagy 2009 Oct;5(7):1037-8

Gladstone Institute of Neurological Disease, San Francisco, CA 945158, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2892253PMC
http://dx.doi.org/10.4161/auto.5.7.9291DOI Listing
October 2009

The effects of Hurricanes Katrina and Rita on seabed polycyclic aromatic hydrocarbon dynamics in the Gulf of Mexico.

Mar Pollut Bull 2009 Jun 5;58(6):851-7. Epub 2009 Mar 5.

Department of Geological Sciences and Environmental Studies, Binghamton University, Binghamton, NY 13902-6000, United States.

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http://dx.doi.org/10.1016/j.marpolbul.2009.01.016DOI Listing
June 2009

Single neuron ubiquitin-proteasome dynamics accompanying inclusion body formation in huntington disease.

J Biol Chem 2009 Feb 10;284(7):4398-403. Epub 2008 Dec 10.

Gladstone Institute of Neurological Disease, San Francisco, California 94158, USA.

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http://dx.doi.org/10.1074/jbc.M806269200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2640959PMC
February 2009

The ubiquitin-proteasome pathway in Huntington's disease.

ScientificWorldJournal 2008 Apr 20;8:421-33. Epub 2008 Apr 20.

Gladstone Institute of Neurological Disease, 1650 Owens St., San Francisco, CA94158, USA.

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http://dx.doi.org/10.1100/tsw.2008.60DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2637619PMC
April 2008

Predicting bioavailability of sediment-associated organic contaminants for Diporeia spp. and oligochaetes.

Environ Sci Technol 2007 Sep;41(18):6442-7

National Oceanic and Atmospheric Administration, Great Lakes Environmental Research Laboratory, 2205 Commonwealth Boulevard, Ann Arbor, Michigan 48105, USA.

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http://dx.doi.org/10.1021/es0706807DOI Listing
September 2007

Microwave-assisted solvent extraction of solid matrices and subsequent detection of pharmaceuticals and personal care products (PPCPs) using gas chromatography-mass spectrometry.

Anal Chim Acta 2007 Apr 24;589(1):125-32. Epub 2007 Feb 24.

Department of Geological Sciences and Environmental Studies, Binghamton University, Binghamton, NY 13902-6000, USA.

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http://dx.doi.org/10.1016/j.aca.2007.02.051DOI Listing
April 2007

The identification of novel ovarian proteases through the use of genomic and bioinformatic methodologies.

Biol Reprod 2006 Dec 26;75(6):823-35. Epub 2006 Jul 26.

Division of Reproductive Sciences, Oregon National Primate Research Center, Oregon Health and Science University West Campus, Beaverton, Oregon 97006, USA.

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http://dx.doi.org/10.1095/biolreprod.106.052290DOI Listing
December 2006

AMPA receptors regulate transcription of the plasticity-related immediate-early gene Arc.

Nat Neurosci 2006 Jul 28;9(7):887-95. Epub 2006 May 28.

Gladstone Institute of Neurological Disease, University of California, San Francisco, California 94158, USA.

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http://dx.doi.org/10.1038/nn1708DOI Listing
July 2006

Inclusion body formation reduces levels of mutant huntingtin and the risk of neuronal death.

Nature 2004 Oct;431(7010):805-10

Gladstone Institute of Neurological Disease, University of California, San Francisco, California 94141, USA.

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http://dx.doi.org/10.1038/nature02998DOI Listing
October 2004

Pharmaceuticals and personal care products (PPCPs) in surface and treated waters of Louisiana, USA and Ontario, Canada.

Sci Total Environ 2003 Jul;311(1-3):135-49

Department of Civil and Environmental Engineering, Tulane University, New Orleans, LA 70118, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S004896970300138
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http://dx.doi.org/10.1016/S0048-9697(03)00138-4DOI Listing
July 2003

Black carbon from the Mississippi River: quantities, sources, and potential implications for the global carbon cycle.

Environ Sci Technol 2002 Jun;36(11):2296-302

USGS, Menlo Park, California 94025, USA.

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http://dx.doi.org/10.1021/es015834bDOI Listing
June 2002