Publications by authors named "Shyam Gopalakrishnan"

36Publications

Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages.

Curr Biol 2020 Oct 27. Epub 2020 Oct 27.

Section for Evolutionary Genomics, The GLOBE Institute, University of Copenhagen, Copenhagen, Denmark; Center for Evolutionary Hologenomics, The GLOBE Institute, University of Copenhagen, Copenhagen, Denmark; Bioinformatics, Department of Health Technology, Technical University of Denmark, Lyngby, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2020.10.002DOI Listing
October 2020

Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens.

Curr Biol 2020 Oct 9. Epub 2020 Oct 9.

Section for Evolutionary Genomics, The GLOBE Institute, University of Copenhagen, Øster Voldgade 5-7, Copenhagen, Denmark; Department of Natural History, NTNU University Museum, Norwegian University of Science and Technology (NTNU), Trondheim NO-7491, Norway; Center for Evolutionary Hologenomics, The GLOBE Institute, University of Copenhagen, Øster Farimagsgade 5A, Copenhagen 1352, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2020.09.051DOI Listing
October 2020

Multi-omic detection of in archaeological human dental calculus.

Philos Trans R Soc Lond B Biol Sci 2020 Nov 5;375(1812):20190584. Epub 2020 Oct 5.

Section for Evolutionary Genomics, GLOBE Institute, Faculty of Health and Medical Sciences, University of Stavanger, Stavanger, Norway.

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http://dx.doi.org/10.1098/rstb.2019.0584DOI Listing
November 2020

Holo-Omics: Integrated Host-Microbiota Multi-omics for Basic and Applied Biological Research.

iScience 2020 Aug 25;23(8):101414. Epub 2020 Jul 25.

Center for Evolutionary Hologenomics, GLOBE Institute, University of Copenhagen, Copenhagen 1353, Denmark.

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http://dx.doi.org/10.1016/j.isci.2020.101414DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7416341PMC
August 2020

Hybridization between two high Arctic cetaceans confirmed by genomic analysis.

Sci Rep 2019 06 20;9(1):7729. Epub 2019 Jun 20.

Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350, København K, Denmark.

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http://dx.doi.org/10.1038/s41598-019-44038-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6586676PMC
June 2019

Promises and pitfalls of using high-throughput sequencing for diet analysis.

Mol Ecol Resour 2019 Mar 22;19(2):327-348. Epub 2018 Nov 22.

Section for Evolutionary Genomics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.

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http://dx.doi.org/10.1111/1755-0998.12960DOI Listing
March 2019

Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure.

Mol Ecol Resour 2018 Apr 19. Epub 2018 Apr 19.

Section for Evolutionary Genomics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.

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http://dx.doi.org/10.1111/1755-0998.12891DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6120510PMC
April 2018

Genome Sequence of a 5,310-Year-Old Maize Cob Provides Insights into the Early Stages of Maize Domestication.

Curr Biol 2016 12 17;26(23):3195-3201. Epub 2016 Nov 17.

Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2016.09.036DOI Listing
December 2016

An Anthropocene map of genetic diversity.

Science 2016 09;353(6307):1532-1535

Center for Macroecology, Evolution, and Climate, Natural History Museum of Denmark, University of Copenhagen, DK-2100 Copenhagen Ø, Denmark.

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http://dx.doi.org/10.1126/science.aaf4381DOI Listing
September 2016

Mapping of Craniofacial Traits in Outbred Mice Identifies Major Developmental Genes Involved in Shape Determination.

PLoS Genet 2015 Nov 2;11(11):e1005607. Epub 2015 Nov 2.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Biology, Plön, Germany.

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http://dx.doi.org/10.1371/journal.pgen.1005607DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4629907PMC
November 2015

Assessing the impact of non-differential genotyping errors on rare variant tests of association.

Hum Hered 2011 15;72(3):153-60. Epub 2011 Oct 15.

Department of Statistics and Operations Research, University of North Carolina, Chapel Hill, NC, USA.

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http://dx.doi.org/10.1159/000332222DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3214826PMC
May 2012

TagSNP selection based on pairwise LD criteria and power analysis in association studies.

Pac Symp Biocomput 2006 :511-22

Center for Statistical Genetics, Department of Biostatistics, School of Public Health, University of Michigan, Ann Arbor, MI 48109-2029, USA.

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January 2007

An efficient comprehensive search algorithm for tagSNP selection using linkage disequilibrium criteria.

Bioinformatics 2006 Jan 3;22(2):220-5. Epub 2005 Nov 3.

Center for Statistical Genetics, Department of Biostatistics, School of Public Health, University of Michigan 1420 Washington Heights, Ann Arbor, MI 48109-2029, USA.

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http://dx.doi.org/10.1093/bioinformatics/bti762DOI Listing
January 2006