Publications by authors named "Shuang G Zhao"

51Publications

Novel Transcriptomic Interactions Between Immune Content and Genomic Classifier Predict Lethal Outcomes in High-grade Prostate Cancer.

Authors:
Kosj Yamoah Shivanshu Awasthi Brandon A Mahal Shuang G Zhao G Daniel Grass Anders Berglund Julieta Abraham-Miranda Travis Gerke Robert J Rounbehler Elai Davicioni Yang Liu Jong Park John L Cleveland Julio M Pow-Sang Daniel Fernandez Javier Torres-Roca R Jeffrey Karnes Edward Schaeffer Stephen J Freedland Daniel E Spratt Robert B Den Timothy R Rebbeck Felix Feng

Eur Urol 2020 Dec 7. Epub 2020 Dec 7.

University of California, San Francisco, CA, USA.

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December 2020

A Systematic Review of the Evidence for the Decipher Genomic Classifier in Prostate Cancer.

Authors:
Neil K Jairath Alan Dal Pra Randy Vince Robert T Dess William C Jackson Jeffrey J Tosoian Sean M McBride Shuang G Zhao Alejandro Berlin Brandon A Mahal Amar U Kishan Robert B Den Stephen J Freedland Simpa S Salami Samuel D Kaffenberger Alan Pollack Phuoc Tran Rohit Mehra Todd M Morgan Adam B Weiner Osama Mohamad Peter R Carroll Matthew R Cooperberg R Jeffrey Karnes Paul L Nguyen Jeff M Michalski Jonathan D Tward Felix Y Feng Edward M Schaeffer Daniel E Spratt

Eur Urol 2020 Dec 5. Epub 2020 Dec 5.

Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA. Electronic address:

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December 2020

SV-HotSpot: detection and visualization of hotspots targeted by structural variants associated with gene expression.

Authors:
Abdallah M Eteleeb David A Quigley Shuang G Zhao Duy Pham Rendong Yang Scott M Dehm Jingqin Luo Felix Y Feng Ha X Dang Christopher A Maher

Sci Rep 2020 09 28;10(1):15890. Epub 2020 Sep 28.

McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, 63110, USA.

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September 2020

Autoantibody Landscape in Patients with Advanced Prostate Cancer.

Authors:
William S Chen Winston A Haynes Rebecca Waitz Kathy Kamath Agustin Vega-Crespo Raunak Shrestha Minlu Zhang Adam Foye Ignacio Baselga Carretero Ivan Perez Garcilazo Meng Zhang Shuang G Zhao Martin Sjöström David A Quigley Jonathan Chou Tomasz M Beer Matthew Rettig Martin Gleave Christopher P Evans Primo Lara Kim N Chi Robert E Reiter Joshi J Alumkal Alan Ashworth Rahul Aggarwal Eric J Small Patrick S Daugherty Antoni Ribas David Y Oh John C Shon Felix Y Feng

Clin Cancer Res 2020 Dec 23;26(23):6204-6214. Epub 2020 Sep 23.

Department of Radiation Oncology, University of California San Francisco, San Francisco, California.

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December 2020

Purine metabolism regulates DNA repair and therapy resistance in glioblastoma.

Authors:
Weihua Zhou Yangyang Yao Andrew J Scott Kari Wilder-Romans Joseph J Dresser Christian K Werner Hanshi Sun Drew Pratt Peter Sajjakulnukit Shuang G Zhao Mary Davis Barbara S Nelson Christopher J Halbrook Li Zhang Francesco Gatto Yoshie Umemura Angela K Walker Maureen Kachman Jann N Sarkaria Jianping Xiong Meredith A Morgan Alnawaz Rehemtualla Maria G Castro Pedro Lowenstein Sriram Chandrasekaran Theodore S Lawrence Costas A Lyssiotis Daniel R Wahl

Nat Commun 2020 07 30;11(1):3811. Epub 2020 Jul 30.

Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, 48109, USA.

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July 2020

The DNA methylation landscape of advanced prostate cancer.

Authors:
Shuang G Zhao William S Chen Haolong Li Adam Foye Meng Zhang Martin Sjöström Rahul Aggarwal Denise Playdle Arnold Liao Joshi J Alumkal Rajdeep Das Jonathan Chou Junjie T Hua Travis J Barnard Adina M Bailey Eric D Chow Marc D Perry Ha X Dang Rendong Yang Ruhollah Moussavi-Baygi Li Zhang Mohammed Alshalalfa S Laura Chang Kathleen E Houlahan Yu-Jia Shiah Tomasz M Beer George Thomas Kim N Chi Martin Gleave Amina Zoubeidi Robert E Reiter Matthew B Rettig Owen Witte M Yvonne Kim Lawrence Fong Daniel E Spratt Todd M Morgan Rohit Bose Franklin W Huang Hui Li Lisa Chesner Tanushree Shenoy Hani Goodarzi Irfan A Asangani Shahneen Sandhu Joshua M Lang Nupam P Mahajan Primo N Lara Christopher P Evans Phillip Febbo Serafim Batzoglou Karen E Knudsen Housheng H He Jiaoti Huang Wilbert Zwart Joseph F Costello Jianhua Luo Scott A Tomlins Alexander W Wyatt Scott M Dehm Alan Ashworth Luke A Gilbert Paul C Boutros Kyle Farh Arul M Chinnaiyan Christopher A Maher Eric J Small David A Quigley Felix Y Feng

Nat Genet 2020 08 13;52(8):778-789. Epub 2020 Jul 13.

Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA.

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August 2020

Tumor Immune Microenvironment Clusters in Localized Prostate Adenocarcinoma: Prognostic Impact of Macrophage Enriched/Plasma Cell Non-Enriched Subtypes.

Authors:
Neil K Jairath Mark W Farha Sudharsan Srinivasan Ruple Jairath Michael D Green Robert T Dess William C Jackson Adam B Weiner Edward M Schaeffer Shuang G Zhao Felix Y Feng Issam El Naqa Daniel E Spratt

J Clin Med 2020 Jun 24;9(6). Epub 2020 Jun 24.

Department of Radiation Oncology, University of Michigan, Ann Arbor, MI 48104, USA.

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June 2020

A Signature That May Be Predictive of Early Versus Late Recurrence After Radiation Treatment for Breast Cancer That May Inform the Biology of Early, Aggressive Recurrences.

Authors:
Corey Speers S Laura Chang Andrea Pesch Cassandra Ritter Eric Olsen Ben Chandler Leah Moubadder Meilan Liu Meleah Cameron Anna Michmerhuizen Kari Wilder-Romans Shuang G Zhao Shyam Nyati Harry Bartelink Felix Y Feng Lori J Pierce

Int J Radiat Oncol Biol Phys 2020 Nov 17;108(3):686-696. Epub 2020 May 17.

Department of Radiation Oncology, University of Michigan, Ann Arbor, Michigan; Comprehensive Cancer Center, University of Michigan, Ann Arbor, Michigan. Electronic address:

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November 2020

Performance of clinicopathologic models in men with high risk localized prostate cancer: impact of a 22-gene genomic classifier.

Authors:
Jeffrey J Tosoian Samuel R Birer R Jeffrey Karnes Jingbin Zhang Elai Davicioni Eric E Klein Stephen J Freedland Sheila Weinmann Bruce J Trock Robert T Dess Shuang G Zhao William C Jackson Kosj Yamoah Alan Dal Pra Brandon A Mahal Todd M Morgan Rohit Mehra Samuel Kaffenberger Simpa S Salami Christopher Kane Alan Pollack Robert B Den Alejandro Berlin Edward M Schaeffer Paul L Nguyen Felix Y Feng Daniel E Spratt

Prostate Cancer Prostatic Dis 2020 12 30;23(4):646-653. Epub 2020 Mar 30.

Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA.

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December 2020

Genomic and clinical characterization of stromal infiltration markers in prostate cancer.

Authors:
Brandon A Mahal Mohammed Alshalalfa Shuang G Zhao Himisha Beltran William S Chen Fallon Chipidza Elai Davicioni R Jeffrey Karnes Sheng-Yu Ku Tamara L Lotan Vinayak Muralidhar Timothy R Rebbeck Edward M Schaeffer Daniel E Spratt Felix Y Feng Paul L Nguyen

Cancer 2020 04 6;126(7):1407-1412. Epub 2020 Jan 6.

Dana-Farber Cancer Institute and Brigham and Women's Hospital, Boston, Massachusetts.

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April 2020

Prostate cancer incidence across stage, NCCN risk groups, and age before and after USPSTF Grade D recommendations against prostate-specific antigen screening in 2012.

Authors:
Santino S Butler Vinayak Muralidhar Shuang G Zhao Nina N Sanford Idalid Franco Zoe H Fullerton Janice Chavez Anthony V D'Amico Felix Y Feng Timothy R Rebbeck Paul L Nguyen Brandon A Mahal

Cancer 2020 02 3;126(4):717-724. Epub 2019 Dec 3.

Dana-Farber Cancer Institute/Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.

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February 2020

Germline polymorphisms associated with impaired survival outcomes and somatic tumor alterations in advanced prostate cancer.

Authors:
William S Chen Eric L Feng Rahul Aggarwal Adam Foye Tomasz M Beer Joshi J Alumkal Martin Gleave Kim N Chi Robert E Reiter Matthew B Rettig Christopher P Evans Eric J Small Nima Sharifi Shuang G Zhao

Prostate Cancer Prostatic Dis 2020 06 19;23(2):316-323. Epub 2019 Nov 19.

Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA.

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June 2020

Clinicogenomic Radiotherapy Classifier Predicting the Need for Intensified Locoregional Treatment After Breast-Conserving Surgery for Early-Stage Breast Cancer.

Authors:
Martin Sjöström S Laura Chang Nick Fishbane Elai Davicioni Shuang G Zhao Linda Hartman Erik Holmberg Felix Y Feng Corey W Speers Lori J Pierce Per Malmström Mårten Fernö Per Karlsson

J Clin Oncol 2019 12 16;37(35):3340-3349. Epub 2019 Oct 16.

Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Sahlgrenska University Hospital, Gothenburg, Sweden.

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December 2019

Transcriptomic Heterogeneity of Androgen Receptor Activity Defines a low AR-Active Subclass in Treatment Naïve Primary Prostate Cancer.

Authors:
Daniel E Spratt Mohammed Alshalalfa Nick Fishbane Adam B Weiner Rohit Mehra Brandon A Mahal Jonathan Lehrer Yang Liu Shuang G Zhao Corey Speers Todd M Morgan Adam P Dicker Stephen J Freedland R Jeffery Karnes Sheila Weinmann Elai Davicioni Ashley E Ross Robert B Den Paul L Nguyen Felix Y Feng Tamara L Lotan Arul M Chinnaiyan Edward M Schaeffer

Clin Cancer Res 2019 11 12;25(22):6721-6730. Epub 2019 Sep 12.

Department of Urology, Feinberg School of Medicine, Northwestern University, Illinois.

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November 2019

DNA-Dependent Protein Kinase Drives Prostate Cancer Progression through Transcriptional Regulation of the Wnt Signaling Pathway.

Authors:
Vishal Kothari Jonathan F Goodwin Shuang G Zhao Justin M Drake Yi Yin S Laura Chang Joseph R Evans Kari Wilder-Romans Kristina Gabbara Emanuela Dylgjeri Jonathan Chou Grace Sun Scott A Tomlins Rohit Mehra Kristen Hege Ellen H Filvaroff Edward M Schaeffer R Jeffrey Karnes David A Quigley Dana E Rathkopf Housheng H He Corey Speers Daniel E Spratt Luke A Gilbert Alan Ashworth Arul M Chinnaiyan Ganesh V Raj Karen E Knudsen Felix Y Feng

Clin Cancer Res 2019 09 2;25(18):5608-5622. Epub 2019 Jul 2.

Department of Radiation Oncology, University of California at San Francisco, CA.

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September 2019

Conservative management of low-risk prostate cancer among young versus older men in the United States: Trends and outcomes from a novel national database.

Authors:
Amandeep R Mahal Santino Butler Idalid Franco Vinayak Muralidhar Dalia Larios Luke R G Pike Shuang G Zhao Nina N Sanford Robert T Dess Felix Y Feng Anthony V D'Amico Daniel E Spratt James B Yu Paul L Nguyen Timothy R Rebbeck Brandon A Mahal

Cancer 2019 10 28;125(19):3338-3346. Epub 2019 Jun 28.

Department of Radiation Oncology, Dana-Farber Cancer Institute/Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.

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October 2019

Transcriptomic and Clinical Characterization of Neuropeptide Y Expression in Localized and Metastatic Prostate Cancer: Identification of Novel Prostate Cancer Subtype with Clinical Implications.

Authors:
Mohammed Alshalalfa Paul L Nguyen Himisha Beltran William S Chen Elai Davicioni Shuang G Zhao Timothy R Rebbeck Edward M Schaeffer Tamara L Lotan Felix Y Feng Brandon A Mahal

Eur Urol Oncol 2019 07 2;2(4):405-412. Epub 2019 Jun 2.

Dana-Farber Cancer Institute and Brigham and Women's Hospital, Boston, MA, USA.

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July 2019

Xenograft-based, platform-independent gene signatures to predict response to alkylating chemotherapy, radiation, and combination therapy for glioblastoma.

Authors:
Shuang G Zhao Menggang Yu Daniel E Spratt S Laura Chang Felix Y Feng Michelle M Kim Corey W Speers Brett L Carlson Ann C Mladek Theodore S Lawrence Jann N Sarkaria Daniel R Wahl

Neuro Oncol 2019 09;21(9):1141-1149

Department of Radiation Oncology, University of Michigan, Ann Arbor, Michigan.

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September 2019

Active Surveillance for Low-Risk Prostate Cancer in Black Patients.

Authors:
Santino Butler Vinayak Muralidhar Janice Chavez Zoe Fullerton Aman Mahal Michelle Nezolosky Marie Vastola Shuang G Zhao Anthony V D'Amico Robert T Dess Felix Y Feng Martin T King Kent W Mouw Daniel E Spratt Quoc-Dien Trinh Paul L Nguyen Timothy R Rebbeck Brandon A Mahal

N Engl J Med 2019 05;380(21):2070-2072

Harvard Radiation Oncology Program, Boston, MA

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May 2019

Impact of Biochemical Failure After Salvage Radiation Therapy on Prostate Cancer-specific Mortality: Competition Between Age and Time to Biochemical Failure.

Authors:
William C Jackson Krithika Suresh Vasu Tumati Robert T Dess Payal D Soni Shuang G Zhao Zachary S Zumsteg Raquibul Hannan Brent K Hollenbeck Arvin George Samuel D Kaffenberger Simpa S Salami Jason W D Hearn Todd M Morgan Rohit Mehra Matthew Schipper Felix Y Feng Neil B Desai Daniel E Spratt

Eur Urol Oncol 2018 09 28;1(4):276-282. Epub 2018 Sep 28.

Department of Radiation Oncology, University of Michigan, Ann Arbor, MI, USA. Electronic address:

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September 2018