Shinpei Kawaoka

Shinpei Kawaoka

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Shinpei Kawaoka

Shinpei Kawaoka

Publications by authors named "Shinpei Kawaoka"

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Identification of a genomic enhancer that enforces proper apoptosis induction in thymic negative selection.

Nat Commun 2019 06 13;10(1):2603. Epub 2019 Jun 13.

The Thomas N. Sato BioMEC-X Laboratories, Advanced Telecommunications Research Institute International (ATR), Soraku-gun, Kyoto, 619-0237, Japan.

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http://dx.doi.org/10.1038/s41467-019-10525-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6565714PMC
June 2019

A novel zebrafish intestinal tumor model reveals a role for -dependent tumor-liver crosstalk in causing adverse effects on the host.

Dis Model Mech 2018 05 3;11(8). Epub 2018 May 3.

Advanced Telecommunications Research Institute International (ATR), The Thomas N. Sato BioMEC-X Laboratories, Kyoto 619-0288, Japan

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http://dx.doi.org/10.1242/dmm.032383DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6124559PMC
May 2018

Remote reprogramming of hepatic circadian transcriptome by breast cancer.

Oncotarget 2017 May;8(21):34128-34140

Advanced Telecommunications Research Institute International (ATR), The Thomas N. Sato BioMEC-X Laboratories, Kyoto, Japan.

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http://www.oncotarget.com/fulltext/16699
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http://dx.doi.org/10.18632/oncotarget.16699DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5470956PMC
May 2017

Silkworm HP1a transcriptionally enhances highly expressed euchromatic genes via association with their transcription start sites.

Nucleic Acids Res 2014 Oct 18;42(18):11462-71. Epub 2014 Sep 18.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan

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http://dx.doi.org/10.1093/nar/gku862DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4191426PMC
October 2014

Making piRNAs in vitro.

Methods Mol Biol 2014 ;1093:35-46

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.

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http://dx.doi.org/10.1007/978-1-62703-694-8_4DOI Listing
June 2014

A single female-specific piRNA is the primary determiner of sex in the silkworm.

Nature 2014 May 14;509(7502):633-6. Epub 2014 May 14.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1038/nature13315DOI Listing
May 2014

Characterization of a novel chromodomain-containing gene from the silkworm, Bombyx mori.

Gene 2013 Sep 11;527(2):649-54. Epub 2013 Jul 11.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1016/j.gene.2013.06.071DOI Listing
September 2013

Hsp90 facilitates accurate loading of precursor piRNAs into PIWI proteins.

RNA 2013 Jul 16;19(7):896-901. Epub 2013 May 16.

Institute of Molecular and Cellular Biosciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1261/rna.037200.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3683924PMC
July 2013

Histone H2B ubiquitin ligase RNF20 is required for MLL-rearranged leukemia.

Proc Natl Acad Sci U S A 2013 Mar 14;110(10):3901-6. Epub 2013 Feb 14.

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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http://dx.doi.org/10.1073/pnas.1301045110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3593849PMC
March 2013

The comprehensive epigenome map of piRNA clusters.

Nucleic Acids Res 2013 Feb 20;41(3):1581-90. Epub 2012 Dec 20.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi, Tokyo, Japan.

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http://dx.doi.org/10.1093/nar/gks1275DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561999PMC
February 2013

Altered expression of testis-specific genes, piRNAs, and transposons in the silkworm ovary masculinized by a W chromosome mutation.

BMC Genomics 2012 Mar 28;13:119. Epub 2012 Mar 28.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Japan.

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http://dx.doi.org/10.1186/1471-2164-13-119DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3342102PMC
March 2012

A role for transcription from a piRNA cluster in de novo piRNA production.

RNA 2012 Feb 22;18(2):265-73. Epub 2011 Dec 22.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo, Japan.

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http://dx.doi.org/10.1261/rna.029777.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3264913PMC
February 2012

The silkworm W chromosome is a source of female-enriched piRNAs.

RNA 2011 Dec 21;17(12):2144-51. Epub 2011 Oct 21.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.

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http://dx.doi.org/10.1261/rna.027565.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3222127PMC
December 2011

3' end formation of PIWI-interacting RNAs in vitro.

Mol Cell 2011 Sep;43(6):1015-22

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1016/j.molcel.2011.07.029DOI Listing
September 2011

Zygotic amplification of secondary piRNAs during silkworm embryogenesis.

RNA 2011 Jul 31;17(7):1401-7. Epub 2011 May 31.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1261/rna.2709411DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3138575PMC
July 2011

The Bombyx ovary-derived cell line endogenously expresses PIWI/PIWI-interacting RNA complexes.

RNA 2009 Jul 21;15(7):1258-64. Epub 2009 May 21.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1261/rna.1452209DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2704083PMC
July 2009

Identification and characterization of globin genes from two lepidopteran insects, Bombyx mori and Samia cynthia ricini.

Gene 2009 Feb 14;431(1-2):33-8. Epub 2008 Nov 14.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1016/j.gene.2008.11.004DOI Listing
February 2009

Bombyx small RNAs: genomic defense system against transposons in the silkworm, Bombyx mori.

Insect Biochem Mol Biol 2008 Dec 27;38(12):1058-65. Epub 2008 Mar 27.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.

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http://dx.doi.org/10.1016/j.ibmb.2008.03.007DOI Listing
December 2008

Bombyx mori nucleopolyhedrovirus SNF2 global transactivator homologue (Bm33) enhances viral pathogenicity in B. mori larvae.

J Gen Virol 2008 Dec;89(Pt 12):3039-46

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1099/vir.0.2008/004887-0DOI Listing
December 2008

Genome-wide survey for baculoviral host homologs using the Bombyx genome sequence.

Insect Biochem Mol Biol 2008 Dec;38(12):1080-6

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.

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December 2008

Developmentally synchronized expression of two Bombyx mori Piwi subfamily genes, SIWI and BmAGO3 in germ-line cells.

Biochem Biophys Res Commun 2008 Mar 10;367(4):755-60. Epub 2008 Jan 10.

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Science, University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2008.01.013DOI Listing
March 2008

Functional analysis of four Gloverin-like genes in the silkworm, Bombyx mori.

Arch Insect Biochem Physiol 2008 Feb;67(2):87-96

Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo, Japan.

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http://dx.doi.org/10.1002/arch.20223DOI Listing
February 2008

Prominent down-regulation of storage protein genes after bacterial challenge in eri-silkworm, Samia cynthia ricini.

Arch Insect Biochem Physiol 2008 Jan;67(1):9-19

Laboratory of Insect Genetics and Bioscience, Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Science, The University of Tokyo, Tokyo, Japan.

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http://doi.wiley.com/10.1002/arch.20214
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http://dx.doi.org/10.1002/arch.20214DOI Listing
January 2008