Seon-Young Kim

Seon-Young Kim

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Seon-Young Kim

Publications by authors named "Seon-Young Kim"

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Modifying effects of depression on the association between BDNF methylation and prognosis of acute coronary syndrome.

Brain Behav Immun 2019 Oct 27;81:422-429. Epub 2019 Jun 27.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea.

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http://dx.doi.org/10.1016/j.bbi.2019.06.038DOI Listing
October 2019

Augmentation of cellular NAD by NQO1 enzymatic action improves age-related hearing impairment.

Aging Cell 2019 Oct 28;18(5):e13016. Epub 2019 Jul 28.

Center for Metabolic Function Regulation (CMFR) and Department of Microbiology, Wonkwang University School of Medicine, Jeonbuk, Korea.

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http://dx.doi.org/10.1111/acel.13016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6718544PMC
October 2019

Problematic smartphone use and related factors in young patients with schizophrenia.

Asia Pac Psychiatry 2019 Sep 1;11(3):e12357. Epub 2019 May 1.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea.

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https://onlinelibrary.wiley.com/doi/abs/10.1111/appy.12357
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http://dx.doi.org/10.1111/appy.12357DOI Listing
September 2019

Histone demethylase PHF2 activates CREB and promotes memory consolidation.

EMBO Rep 2019 Sep 30;20(9):e45907. Epub 2019 Jul 30.

Department of Physiology and Biomedical Science, Seoul National University College of Medicine, Seoul, Korea.

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http://dx.doi.org/10.15252/embr.201845907DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6726911PMC
September 2019

Biological Characteristics and Clinical Significance of ITGB1 and RHOC in Patients With Recurrent Colorectal Cancer.

Anticancer Res 2019 Sep;39(9):4853-4864

Department of Surgery, University of Ulsan College of Medicine, Seoul, Republic of Korea

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http://dx.doi.org/10.21873/anticanres.13671DOI Listing
September 2019

Comparison of the Genedia MTB/NTM Detection Kit and Anyplex plus MTB/NTM Detection Kit for detection of Mycobacterium tuberculosis complex and nontuberculous mycobacteria in clinical specimens.

J Clin Lab Anal 2019 Sep 16:e23021. Epub 2019 Sep 16.

Department of Laboratory Medicine, Chungnam National University College of Medicine, Chungnam National University Hospital, Daejeon, Korea.

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http://dx.doi.org/10.1002/jcla.23021DOI Listing
September 2019

Using MARRVEL v1.2 for Bioinformatics Analysis of Human Genes and Variant Pathogenicity.

Curr Protoc Bioinformatics 2019 Sep;67(1):e85

Department of Pediatrics, Jan and Dan Duncan Neurological Research Institute at Texas, Children's Hospital, Houston, Texas.

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http://dx.doi.org/10.1002/cpbi.85DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6750039PMC
September 2019

Cytogenetic evolution in myeloproliferative neoplasms with different molecular abnormalities.

Blood Cells Mol Dis 2019 07 13;77:120-128. Epub 2019 Apr 13.

Department of Laboratory Medicine, Chungnam National University School of Medicine, Chungnam National University Hospital, Daejeon, Republic of Korea. Electronic address:

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http://dx.doi.org/10.1016/j.bcmd.2019.04.007DOI Listing
July 2019

HOXC10 overexpression promotes cell proliferation and migration in gastric cancer.

Oncol Rep 2019 Jul 17;42(1):202-212. Epub 2019 May 17.

Department of Functional Genomics, KRIBB School of Bioscience, Korea University of Science and Technology (UST), Yuseong‑gu, Daejeon 34113, Republic of Korea.

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http://dx.doi.org/10.3892/or.2019.7164DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549078PMC
July 2019

GENT2: an updated gene expression database for normal and tumor tissues.

BMC Med Genomics 2019 Jul 11;12(Suppl 5):101. Epub 2019 Jul 11.

Genome Editing Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Korea.

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http://dx.doi.org/10.1186/s12920-019-0514-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6624177PMC
July 2019

Collaborative Care to Relieve Psychological Distress in Patients with Medically Inoperable Lung Cancer: Design and Rationale for a Clinical Trial.

Psychiatry Investig 2019 Jul 25;16(7):547-553. Epub 2019 Jul 25.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea.

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http://dx.doi.org/10.30773/pi.2019.03.09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6664219PMC
July 2019

Prevalence and predictors of major depressive disorder in bereaved caregivers at 6 and 13 months.

Palliat Support Care 2019 06 28;17(3):300-305. Epub 2018 May 28.

Department of Psychiatry,Chonnam National University Medical School,Gwangju,Republic of Korea.

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http://dx.doi.org/10.1017/S1478951518000366DOI Listing
June 2019

Beta-binomial modeling of CRISPR pooled screen data identifies target genes with greater sensitivity and fewer false negatives.

Genome Res 2019 06 23;29(6):999-1008. Epub 2019 Apr 23.

Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, Texas 77030, USA.

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http://dx.doi.org/10.1101/gr.245571.118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6581060PMC
June 2019

TLR4 (toll-like receptor 4) activation suppresses autophagy through inhibition of FOXO3 and impairs phagocytic capacity of microglia.

Autophagy 2019 May 13;15(5):753-770. Epub 2018 Dec 13.

a Department of Brain and Cognitive Sciences , Daegu Gyeongbuk Institute of Science and Technology (DGIST) , Daegu , Republic of Korea.

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http://dx.doi.org/10.1080/15548627.2018.1556946DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6526818PMC
May 2019

Biclustering analysis of transcriptome big data identifies condition-specific microRNA targets.

Nucleic Acids Res 2019 May;47(9):e53

School of Life Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.

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http://dx.doi.org/10.1093/nar/gkz139DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6511842PMC
May 2019

Physical Health Literacy and Health-related Behaviors in Patients with Psychosis.

Clin Psychopharmacol Neurosci 2019 May;17(2):279-287

Department of Psychiatry, Chonnam National University Medical School.

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http://dx.doi.org/10.9758/cpn.2019.17.2.279DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478081PMC
May 2019

Vascular defects of knockouts are ameliorated by modulating calcium signaling in zebrafish.

Dis Model Mech 2019 05 23;12(5). Epub 2019 May 23.

Disease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea

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http://dx.doi.org/10.1242/dmm.037044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550036PMC
May 2019

GScluster: network-weighted gene-set clustering analysis.

BMC Genomics 2019 May 9;20(1):352. Epub 2019 May 9.

School of Life Sciences, Ulsan National Institute of Science and Technology, Ulsan, Republic of Korea.

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http://dx.doi.org/10.1186/s12864-019-5738-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6507172PMC
May 2019

Synthesis and Anticancer Evaluation of 1,4-Naphthoquinone Derivatives Containing a Phenylaminosulfanyl Moiety.

ChemMedChem 2019 Mar 22;14(5):532-544. Epub 2019 Jan 22.

Department of Life Science, Department of Energy Storage/Conversion Engineering of Graduate School and Hydrogen and Fuel Cell Research Center, Chonbuk National University, Jeonju, Jeollabuk-do, 54896, Republic of Korea.

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http://dx.doi.org/10.1002/cmdc.201800749DOI Listing
March 2019

CDRgator: An Integrative Navigator of Cancer Drug Resistance Gene Signatures.

Mol Cells 2019 Mar 12;42(3):237-244. Epub 2019 Feb 12.

Ewha Research Center for Systems Biology, Department of Life Science, Division of Molecular & Life Sciences, Ewha Womans University, Seoul 03760, Korea.

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http://dx.doi.org/10.14348/molcells.2018.0413DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6449719PMC
March 2019

The role of platelet hyperreactivity in venous thromboembolism after total knee arthroplasty in elderly population without pharmacologic prophylaxis: A single-center study.

Int J Lab Hematol 2019 Feb 17;41(1):102-108. Epub 2018 Oct 17.

Laboratory Medicine, Chungnam National University Hospital, Daejeon, South Korea.

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http://dx.doi.org/10.1111/ijlh.12932DOI Listing
February 2019

Sprout Extract Protect Renal Mesangial Cell Dysfunction against High Glucose by Modulating AMPK and NADPH Oxidase Signaling.

Nutrients 2019 Feb 8;11(2). Epub 2019 Feb 8.

Jeonju AgroBio-Materials Institute, 54810, Wonjangdong-gil 111-27, Deokjin-gu, Jeonju-si 54810, Jeollabuk-do, Korea.

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http://dx.doi.org/10.3390/nu11020356DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413074PMC
February 2019

Automated Versus Conventional Microscopic Interpretation of Antinuclear Antibody Indirect Immunofluorescence Test.

Ann Clin Lab Sci 2019 Jan;49(1):127-133

Department of Laboratory Medicine, Chungnam National University Hospital, Daejeon, Republic of Korea

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January 2019

Development and feasibility of smartphone application for cognitive-behavioural case management of individuals with early psychosis.

Early Interv Psychiatry 2018 12 18;12(6):1087-1093. Epub 2017 May 18.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea.

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http://dx.doi.org/10.1111/eip.12418DOI Listing
December 2018

Whole genome MBD-seq and RRBS analyses reveal that hypermethylation of gastrointestinal hormone receptors is associated with gastric carcinogenesis.

Exp Mol Med 2018 12 3;50(12):156. Epub 2018 Dec 3.

Genome Editing Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125 Gwahak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea.

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http://www.nature.com/articles/s12276-018-0179-x
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http://dx.doi.org/10.1038/s12276-018-0179-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6277407PMC
December 2018

Pharmacological stimulation of NQO1 decreases NADPH levels and ameliorates acute pancreatitis in mice.

Cell Death Dis 2018 Dec 18;10(1). Epub 2018 Dec 18.

Center for Metabolic Function Regulation & Department of Microbiology, Wonkwang University School of Medicine, Iksan, Jeonbuk, 54538, Republic of Korea.

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http://dx.doi.org/10.1038/s41419-018-1252-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6315021PMC
December 2018

Delirium Stigma Among Healthcare Staff.

Geriatrics (Basel) 2018 Dec 31;4(1). Epub 2018 Dec 31.

School of Medicine and Health Institute for the Development of Education and Scholarship (Health IDEAS), Griffith University, Queensland 4122, Australia.

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http://www.mdpi.com/2308-3417/4/1/6
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http://dx.doi.org/10.3390/geriatrics4010006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6473673PMC
December 2018

Do the Phenotypes of Symptom Fluctuation Differ Among Motor Subtypes in Patients With Delirium?

J Pain Symptom Manage 2018 11 8;56(5):667-677. Epub 2018 Aug 8.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea; Department of Psychiatry, Chonnam National University Hospital, Gwangju, Republic of Korea.

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https://linkinghub.elsevier.com/retrieve/pii/S08853924183039
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http://dx.doi.org/10.1016/j.jpainsymman.2018.07.022DOI Listing
November 2018

Changes in depression status during the year after breast cancer surgery and impact on quality of life and functioning.

Gen Hosp Psychiatry 2018 Jan - Feb;50:33-37. Epub 2017 Sep 29.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea. Electronic address:

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http://dx.doi.org/10.1016/j.genhosppsych.2017.09.009DOI Listing
October 2018

Vitamin C Promotes Astrocyte Differentiation Through DNA Hydroxymethylation.

Stem Cells 2018 Oct 31;36(10):1578-1588. Epub 2018 Jul 31.

Department of Functional Genomics, University of Science and Technology (UST), Daejeon, South Korea.

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http://dx.doi.org/10.1002/stem.2886DOI Listing
October 2018

Genetic Analysis of in an Old Female Patient with Type II Autosomal Dominant Osteopetrosis.

Endocrinol Metab (Seoul) 2018 Sep;33(3):380-386

Department of Internal Medicine, Chungnam National University College of Medicine, Daejeon, Korea.

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http://dx.doi.org/10.3803/EnM.2018.33.3.380DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6145957PMC
September 2018

Generation of Whole-Genome Sequencing Data for Comparing Primary and Castration-Resistant Prostate Cancer.

Genomics Inform 2018 Sep 30;16(3):71-74. Epub 2018 Sep 30.

Genome Editing Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 34141, Korea.

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http://genominfo.org/journal/view.php?doi=10.5808/GI.2018.16
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http://dx.doi.org/10.5808/GI.2018.16.3.71DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6187813PMC
September 2018

Pyrosequencing-based quantitative measurement of CALR mutation allele burdens and their clinical implications in patients with myeloproliferative neoplasms.

Clin Chim Acta 2018 Aug 1;483:183-191. Epub 2018 May 1.

Department of Laboratory Medicine, Chungnam National University School of Medicine, Chungnam National University Hospital, Daejeon, Republic of Korea; Cancer Research Institute, Chungnam National University School of Medicine, Daejeon, Republic of Korea. Electronic address:

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http://dx.doi.org/10.1016/j.cca.2018.05.001DOI Listing
August 2018

Rapid Screening of Urinary Tract Infection and Discrimination of Gram-Positive and Gram-Negative Bacteria by Automated Flow Cytometric Analysis Using Sysmex UF-5000.

J Clin Microbiol 2018 08 26;56(8). Epub 2018 Jul 26.

Department of Laboratory Medicine, Chungnam National University School of Medicine, Chungnam National University Hospital, Daejeon, Republic of Korea

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http://jcm.asm.org/lookup/doi/10.1128/JCM.02004-17
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http://dx.doi.org/10.1128/JCM.02004-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6062802PMC
August 2018

Rapid and Integrative Discovery of Retina Regulatory Molecules.

Cell Rep 2018 Aug;24(9):2506-2519

Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Huffington Center on Aging, Baylor College of Medicine, Houston, TX 77030, USA; Program in Developmental Biology, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2018.07.090DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6170014PMC
August 2018

Prevalence and risk factors for problematic Internet use among rural adolescents in Korea.

Asia Pac Psychiatry 2018 Jun 21;10(2):e12310. Epub 2018 Jan 21.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Korea.

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http://dx.doi.org/10.1111/appy.12310DOI Listing
June 2018

YAP/TAZ Initiates Gastric Tumorigenesis via Upregulation of MYC.

Cancer Res 2018 06 18;78(12):3306-3320. Epub 2018 Apr 18.

National Creative Research Initiatives Center for Cell Division and Differentiation, Department of Biological Sciences, KAIST, Daejeon, Republic of Korea.

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http://dx.doi.org/10.1158/0008-5472.CAN-17-3487DOI Listing
June 2018

Epigenetic silencing of miR-1271 enhances MEK1 and TEAD4 expression in gastric cancer.

Cancer Med 2018 Jun 4. Epub 2018 Jun 4.

Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.

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http://doi.wiley.com/10.1002/cam4.1605
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http://dx.doi.org/10.1002/cam4.1605DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6051202PMC
June 2018

Discriminating myelodysplastic syndrome and other myeloid malignancies from non-clonal disorders by multiparametric analysis of automated cell data.

Clin Chim Acta 2018 May 31;480:56-64. Epub 2018 Jan 31.

Department of Laboratory Medicine, Chungnam National University School of Medicine, Chungnam National University Hospital, Daejeon, Republic of Korea.

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http://dx.doi.org/10.1016/j.cca.2018.01.029DOI Listing
May 2018

The MAKE Biomarker Discovery for Enhancing anTidepressant Treatment Effect and Response (MAKE BETTER) Study: Design and Methodology

Psychiatry Investig 2018 05 5;15(5):538-545. Epub 2018 Apr 5.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Republic of Korea.

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http://dx.doi.org/10.30773/pi.2017.10.2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5975999PMC
May 2018

Hippo-mediated suppression of IRS2/AKT signaling prevents hepatic steatosis and liver cancer.

J Clin Invest 2018 03 5;128(3):1010-1025. Epub 2018 Feb 5.

National Creative Research Initiatives Center, Department of Biological Sciences, Biomedical Research Center, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, South Korea.

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http://dx.doi.org/10.1172/JCI95802DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824861PMC
March 2018

The LncRNA EPEL Promotes Lung Cancer Cell Proliferation Through E2F Target Activation.

Cell Physiol Biochem 2018 9;45(3):1270-1283. Epub 2018 Feb 9.

Translational Research Branch, Research Institute, National Cancer Center, Goyang, Republic of Korea.

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http://dx.doi.org/10.1159/000487460DOI Listing
March 2018

Anti-hyperglycemic effects and signaling mechanism of sprout extract.

Nutr Res Pract 2018 Feb 12;12(1):20-28. Epub 2018 Jan 12.

Jeonju AgroBio-Materials Institute, 111-27, Wonjangdong-gil, Deokjin-gu, Jeonju, Jeonbuk 54810, Korea.

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http://dx.doi.org/10.4162/nrp.2018.12.1.20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5792252PMC
February 2018

Gender-specific risk factors for low bone mineral density in patients taking antipsychotics for psychosis.

Hum Psychopharmacol 2018 01 8;33(1). Epub 2018 Jan 8.

Department of Psychiatry, Chonnam National University Medical School, Gwangju, South Korea.

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http://dx.doi.org/10.1002/hup.2648DOI Listing
January 2018

Improvement of d-Lactic Acid Production in Saccharomyces cerevisiae Under Acidic Conditions by Evolutionary and Rational Metabolic Engineering.

Biotechnol J 2017 Oct 9;12(10). Epub 2017 Aug 9.

School of Chemical and Biological Engineering, Institute of Chemical Processes, Seoul National University, Seoul, Republic of Korea.

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http://dx.doi.org/10.1002/biot.201700015DOI Listing
October 2017

The high frequency of the U2AF1 S34Y mutation and its association with isolated trisomy 8 in myelodysplastic syndrome in Asians, but not in Caucasians.

Leuk Res 2017 10 7;61:96-103. Epub 2017 Sep 7.

Department of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea; Cancer Research Institute, Seoul National University College of Medicine, Seoul, Republic of Korea. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01452126173050
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http://dx.doi.org/10.1016/j.leukres.2017.09.001DOI Listing
October 2017

CRISPRcloud: a secure cloud-based pipeline for CRISPR pooled screen deconvolution.

Bioinformatics 2017 Sep;33(18):2963-2965

Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX, USA.

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http://dx.doi.org/10.1093/bioinformatics/btx335DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870715PMC
September 2017

Low dietary intake of n-3 fatty acids, niacin, folate, and vitamin C in Korean patients with schizophrenia and the development of dietary guidelines for schizophrenia.

Nutr Res 2017 Sep 19;45:10-18. Epub 2017 Jul 19.

Department of Psychiatry, Chonnam National University Medical School, Gwangju 61469, Republic of Korea; Gwangju Bukgu Community Mental Health Center, Gwangju 61261, Republic of Korea; Gwangju Mental Health Commission, Gwangju 61489, Republic of Korea. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S02715317173015
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http://dx.doi.org/10.1016/j.nutres.2017.07.001DOI Listing
September 2017

PSMB8 as a Candidate Marker of Responsiveness to Preoperative Radiation Therapy in Rectal Cancer Patients.

Int J Radiat Oncol Biol Phys 2017 08 22;98(5):1164-1173. Epub 2017 Mar 22.

Department of Surgery, University of Ulsan College of Medicine, Seoul, Korea; Asan Institute for Life Sciences, Asan Medical Center, Seoul, Korea. Electronic address:

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http://dx.doi.org/10.1016/j.ijrobp.2017.03.023DOI Listing
August 2017

Development of zebrafish medulloblastoma-like PNET model by TALEN-mediated somatic gene inactivation.

Oncotarget 2017 Aug 21;8(33):55280-55297. Epub 2017 Jul 21.

Comparative Biomedicine Research Branch, Research Institute, National Cancer Center, Goyang, Republic of Korea.

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http://dx.doi.org/10.18632/oncotarget.19424DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5589658PMC
August 2017

Improving Gene-Set Enrichment Analysis of RNA-Seq Data with Small Replicates.

PLoS One 2016 9;11(11):e0165919. Epub 2016 Nov 9.

School of Life Sciences, Ulsan National Institute of Science and Technology, Ulsan, Republic of Korea.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0165919PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5102490PMC
July 2017

Perceived Stigma and Quality of Life in Patients Following Recovery From Delirium.

J Clin Psychiatry 2017 Jul;78(7):e744-e749

Department of Psychiatry, Chonnam National University Medical School, Gwangju, Korea.

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http://dx.doi.org/10.4088/JCP.16m11076DOI Listing
July 2017

Evaluation of an Automated Reader and Color Interpretation-Based Immunoassays for Multiplexed Drug-of-Abuse Testing in Urine.

J Anal Toxicol 2017 Jun;41(5):412-420

Department of Laboratory Medicine, Chungnam National University School of Medicine, 282, Munhwa-ro, Jung-gu, Daejeon, 35015, Republic of Korea.

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http://dx.doi.org/10.1093/jat/bkx014DOI Listing
June 2017

Variability in Chromatin Architecture and Associated DNA Repair at Genomic Positions Containing Somatic Mutations.

Cancer Res 2017 06 13;77(11):2822-2833. Epub 2017 Apr 13.

Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Korea.

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http://dx.doi.org/10.1158/0008-5472.CAN-16-3033DOI Listing
June 2017

MARRVEL: Integration of Human and Model Organism Genetic Resources to Facilitate Functional Annotation of the Human Genome.

Am J Hum Genet 2017 Jun 11;100(6):843-853. Epub 2017 May 11.

Program in Developmental Biology, Baylor College of Medicine (BCM), Houston, TX 77030, USA; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Molecular and Human Genetics, BCM, Houston, TX 77030, USA; Howard Hughes Medical Institute, BCM, Houston, TX 77030, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2017.04.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5670038PMC
June 2017

Intrinsic Molecular Processes: Impact on Mutagenesis.

Trends Cancer 2017 05 17;3(5):357-371. Epub 2017 Apr 17.

Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea; Department of Functional Genomics, University of Science and Technology, Daejeon, Korea. Electronic address:

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http://dx.doi.org/10.1016/j.trecan.2017.03.009DOI Listing
May 2017

Hypocholesterolemic Effects of Probiotic Mixture on Diet-Induced Hypercholesterolemic Rats.

Nutrients 2017 Mar 16;9(3). Epub 2017 Mar 16.

Department of Veterinary Pharmacology and Toxicology, College of Veterinary Medicine, Biosafety Research Institute and Korea Zoonosis Research Institue, Chonbuk National University, Iksan 54596, Korea.

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http://www.mdpi.com/2072-6643/9/3/293
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http://dx.doi.org/10.3390/nu9030293DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5372956PMC
March 2017

A ChIP-Seq Data Analysis Pipeline Based on Bioconductor Packages.

Genomics Inform 2017 Mar 29;15(1):11-18. Epub 2017 Mar 29.

Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Korea.

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http://dx.doi.org/10.5808/GI.2017.15.1.11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389943PMC
March 2017

Use of Graph Database for the Integration of Heterogeneous Biological Data.

Genomics Inform 2017 Mar 29;15(1):19-27. Epub 2017 Mar 29.

Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Korea.

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http://dx.doi.org/10.5808/GI.2017.15.1.19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389944PMC
March 2017

MRTF potentiates TEAD-YAP transcriptional activity causing metastasis.

EMBO J 2017 02 27;36(4):520-535. Epub 2016 Dec 27.

National Creative Research Initiatives Center for Cell Division and Differentiation, Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea

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http://dx.doi.org/10.15252/embj.201695137DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5694947PMC
February 2017

Epigenetic regulation of noncoding RNA transcription by mammalian RNA polymerase III.

Epigenomics 2017 02;9(2):171-187

Department of Biochemistry & Molecular Biology, University of Texas Medical Branch, Galveston, TX 77555-1072, USA.

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http://dx.doi.org/10.2217/epi-2016-0108DOI Listing
February 2017

A late-lineage murine neutrophil precursor population exhibits dynamic changes during demand-adapted granulopoiesis.

Sci Rep 2017 01 6;7:39804. Epub 2017 Jan 6.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, 34141, Republic of Korea.

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http://dx.doi.org/10.1038/srep39804DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216372PMC
January 2017

Cheongsangbangpung-tang ameliorated the acute inflammatory response via the inhibition of NF-κB activation and MAPK phosphorylation.

BMC Complement Altern Med 2017 Jan 13;17(1):46. Epub 2017 Jan 13.

College of Korean Medicine, Daegu Haany University, 1 Haanydaero, Gyeongsan, 38610, Republic of Korea.

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http://dx.doi.org/10.1186/s12906-016-1501-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5237186PMC
January 2017

Genome-wide functional analysis using the barcode sequence alignment and statistical analysis (Barcas) tool.

BMC Bioinformatics 2016 Dec 23;17(Suppl 17):475. Epub 2016 Dec 23.

Korea Research Institute of Bioscience and Biotechnology (KRIBB), Personalized Genomic Medicine Research Center, Daejeon, Republic of Korea.

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http://dx.doi.org/10.1186/s12859-016-1326-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5260075PMC
December 2016

Infection-specific phosphorylation of glutamyl-prolyl tRNA synthetase induces antiviral immunity.

Nat Immunol 2016 Nov 5;17(11):1252-1262. Epub 2016 Sep 5.

Infection and Immunity Research Laboratory, Microbiomics and Immunity Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, Korea.

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http://dx.doi.org/10.1038/ni.3542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5173487PMC
November 2016

GSF2 deletion increases lactic acid production by alleviating glucose repression in Saccharomyces cerevisiae.

Sci Rep 2016 10 6;6:34812. Epub 2016 Oct 6.

School of Chemical and Biological Engineering, Institute of Chemical Processes, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Republic of Korea.

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http://dx.doi.org/10.1038/srep34812DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052599PMC
October 2016

A proteogenomic approach for protein-level evidence of genomic variants in cancer cells.

Sci Rep 2016 10 13;6:35305. Epub 2016 Oct 13.

Center for Theragnosis, Korea Institute of Science and Technology, Seoul 02792, Republic of Korea.

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http://dx.doi.org/10.1038/srep35305DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062161PMC
October 2016

Identification and evaluation of age-correlated DNA methylation markers for forensic use.

Forensic Sci Int Genet 2016 07 17;23:64-70. Epub 2016 Mar 17.

Epigenomics Research Center, Genome Institute, Korea Research Institute of Bioscience and Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon, Republic of Korea; Department of Functional Genomics, University of Science of Technology, 125 Gwahak-ro, Yuseong-gu, Daejeon, Republic of Korea. Electronic address:

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http://dx.doi.org/10.1016/j.fsigen.2016.03.005DOI Listing
July 2016

Short telomere length and its correlation with gene mutations in myelodysplastic syndrome.

J Hematol Oncol 2016 07 28;9(1):62. Epub 2016 Jul 28.

Department of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.

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http://dx.doi.org/10.1186/s13045-016-0287-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4964031PMC
July 2016

Specific expression and methylation of SLIT1, SLIT2, SLIT3, and miR-218 in gastric cancer subtypes.

Int J Oncol 2016 Jun 6;48(6):2497-507. Epub 2016 Apr 6.

Genome Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea.

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http://dx.doi.org/10.3892/ijo.2016.3473DOI Listing
June 2016

LATS-YAP/TAZ controls lineage specification by regulating TGFβ signaling and Hnf4α expression during liver development.

Nat Commun 2016 06 30;7:11961. Epub 2016 Jun 30.

National Creative Research Initiatives Center for Cell Division and Differentiation, Department of Biological Science, Korea Advanced Institute of Science and Technology, Daejeon 34141, Republic of Korea.

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http://dx.doi.org/10.1038/ncomms11961DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4931324PMC
June 2016

Integrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer.

Oncotarget 2016 May;7(18):25620-31

Department of Functional Genomics, University of Science and Technology, Daejeon, Republic of Korea.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5041931PMC
http://dx.doi.org/10.18632/oncotarget.8239DOI Listing
May 2016

Non-negligible Occurrence of Errors in Gender Description in Public Data Sets.

Genomics Inform 2016 Mar 31;14(1):34-40. Epub 2016 Mar 31.

Genome Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Korea.; Department of Functional Genomics, University of Science and Technology (UST), Daejeon 34113, Korea.

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http://dx.doi.org/10.5808/GI.2016.14.1.34DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838528PMC
March 2016