Seiichi Toki

Seiichi Toki

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Seiichi Toki

Publications by authors named "Seiichi Toki"

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An In Vivo Targeted Deletion of the Calmodulin-Binding Domain from Rice Glutamate Decarboxylase 3 (OsGAD3) Increases γ-Aminobutyric Acid Content in Grains.

Rice (N Y) 2020 Mar 16;13(1):20. Epub 2020 Mar 16.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.

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http://dx.doi.org/10.1186/s12284-020-00380-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7076103PMC
March 2020

Allelic mutations in the Ripening-inhibitor (RIN) locus generate extensive variation in tomato ripening.

Plant Physiol 2020 Feb 24. Epub 2020 Feb 24.

National Agriculture and Food Research Organization CITY: Tsukuba STATE: Ibaraki POSTAL_CODE: 305-8602 Japan [JP].

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http://dx.doi.org/10.1104/pp.20.00020DOI Listing
February 2020

A novel approach to carotenoid accumulation in rice callus by mimicking the cauliflower Orange mutation via genome editing.

Rice (N Y) 2019 Nov 12;12(1):81. Epub 2019 Nov 12.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.

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http://dx.doi.org/10.1186/s12284-019-0345-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6851270PMC
November 2019

An adenine base editor with expanded targeting scope using SpCas9-NGv1 in rice.

Plant Biotechnol J 2019 08 30;17(8):1476-1478. Epub 2019 Apr 30.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.

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https://onlinelibrary.wiley.com/doi/abs/10.1111/pbi.13120
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http://dx.doi.org/10.1111/pbi.13120DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6662097PMC
August 2019

Targeted Mutagenesis Using FnCpf1 in Tobacco.

Methods Mol Biol 2019 ;1917:269-281

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.

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http://link.springer.com/10.1007/978-1-4939-8991-1_20
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http://dx.doi.org/10.1007/978-1-4939-8991-1_20DOI Listing
June 2019

Targeted deletion of rice retrotransposon Tos17 via CRISPR/Cas9.

Plant Cell Rep 2019 Apr 21;38(4):455-458. Epub 2018 Nov 21.

Plant Genome Engineering Research Unit, Division of Applied Genetics, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 1-2 Owashi, Tsukuba, Ibaraki, 305-8634, Japan.

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http://dx.doi.org/10.1007/s00299-018-2357-7DOI Listing
April 2019

FnCpf1-Mediated Targeted Mutagenesis in Plants.

Methods Mol Biol 2018 ;1795:223-239

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1007/978-1-4939-7874-8_18DOI Listing
February 2019

Genome editing in plants by engineered CRISPR-Cas9 recognizing NG PAM.

Nat Plants 2019 01 10;5(1):14-17. Epub 2018 Dec 10.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, Japan.

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http://www.nature.com/articles/s41477-018-0321-8
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http://dx.doi.org/10.1038/s41477-018-0321-8DOI Listing
January 2019

Production of high oleic/low linoleic rice by genome editing.

Plant Physiol Biochem 2018 Oct 26;131:58-62. Epub 2018 Apr 26.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.plaphy.2018.04.033DOI Listing
October 2018

Simultaneous site-directed mutagenesis of duplicated loci in soybean using a single guide RNA.

Plant Cell Rep 2018 Mar 15;37(3):553-563. Epub 2018 Jan 15.

Graduate School of Agriculture, Hokkaido University, Kita 9, Nishi 9, Kita-ku, Sapporo, Hokkaido, 060-8589, Japan.

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http://link.springer.com/10.1007/s00299-018-2251-3
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http://dx.doi.org/10.1007/s00299-018-2251-3DOI Listing
March 2018

Targeted Mutagenesis in Rice Using TALENs and the CRISPR/Cas9 System.

Methods Mol Biol 2016 ;1469:123-35

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1007/978-1-4939-4931-1_9DOI Listing
December 2017

Seamless Genome Editing in Rice via Gene Targeting and Precise Marker Elimination.

Methods Mol Biol 2016 ;1469:137-46

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1007/978-1-4939-4931-1_10DOI Listing
December 2017

In Planta Processing of the SpCas9-gRNA Complex.

Plant Cell Physiol 2017 Nov;58(11):1857-1867

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1093/pcp/pcx154DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5921533PMC
November 2017

Re-evaluation of the rin mutation and the role of RIN in the induction of tomato ripening.

Nat Plants 2017 Nov 30;3(11):866-874. Epub 2017 Oct 30.

Institute of Agrobiological Sciences, NARO, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://www.nature.com/articles/s41477-017-0041-5
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http://dx.doi.org/10.1038/s41477-017-0041-5DOI Listing
November 2017

CRISPR/Cas9-mediated targeted mutagenesis in grape.

PLoS One 2017 18;12(5):e0177966. Epub 2017 May 18.

Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Kannondai, Tsukuba, Ibaraki, Japan.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0177966PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436839PMC
September 2017

A removable virus vector suitable for plant genome editing.

Plant J 2017 Aug 6;91(3):558-561. Epub 2017 Jun 6.

Plant and Microbial Research Unit, Division of Plant and Microbial Sciences, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1111/tpj.13581DOI Listing
August 2017

CRISPR/Cas9-mediated mutagenesis of the dihydroflavonol-4-reductase-B (DFR-B) locus in the Japanese morning glory Ipomoea (Pharbitis) nil.

Sci Rep 2017 08 30;7(1):10028. Epub 2017 Aug 30.

Graduate School of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8572, Japan.

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http://www.nature.com/articles/s41598-017-10715-1
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http://dx.doi.org/10.1038/s41598-017-10715-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5577235PMC
August 2017

A Split Staphylococcus aureus Cas9 as a Compact Genome-Editing Tool in Plants.

Plant Cell Physiol 2017 04;58(4):643-649

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Kannondai, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1093/pcp/pcx034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444561PMC
April 2017

DNA Methylation Affects the Efficiency of Transcription Activator-Like Effector Nucleases-Mediated Genome Editing in Rice.

Front Plant Sci 2017 13;8:302. Epub 2017 Mar 13.

Institute of Agrobiological Sciences, National Agriculture and Food Research Organization (NARO) Tsukuba, Japan.

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http://dx.doi.org/10.3389/fpls.2017.00302DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5346537PMC
March 2017

Efficient targeted mutagenesis of rice and tobacco genomes using Cpf1 from Francisella novicida.

Sci Rep 2016 12 1;6:38169. Epub 2016 Dec 1.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1038/srep38169DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131344PMC
December 2016

Precision Targeted Mutagenesis via Cas9 Paired Nickases in Rice.

Plant Cell Physiol 2016 May 2;57(5):1058-68. Epub 2016 Mar 2.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602 Japan

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http://dx.doi.org/10.1093/pcp/pcw049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4867050PMC
May 2016

Highly specific targeted mutagenesis in plants using Staphylococcus aureus Cas9.

Sci Rep 2016 05 26;6:26871. Epub 2016 May 26.

Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1038/srep26871DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4881040PMC
May 2016

A Defect in DNA Ligase4 Enhances the Frequency of TALEN-Mediated Targeted Mutagenesis in Rice.

Plant Physiol 2016 Feb 14;170(2):653-66. Epub 2015 Dec 14.

Plant Genome Engineering Research Unit (A.N.-Y., H.S., A.M., S.T.), Rice Applied Genomics Research Unit (T.H., K.S.), and Advanced Genomics Laboratory (M.H., Y.K.), National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan;Department of Genetics, Cell Biology, and Development and Center for Genome Engineering, University of Minnesota, Minneapolis, Minnesota 55455 (T.C., C.S., D.F.V.);Center for Collaboration among Agriculture, Industry, and Commerce, University of Tokushima, Tokushima 770-8503, Japan (K.O.); andKihara Institute for Biological Research, Yokohama City University, Yokohama 244-0813, Japan (S.T.)

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http://www.plantphysiol.org/content/170/2/653.full.pdf
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http://www.plantphysiol.org/lookup/doi/10.1104/pp.15.01542
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http://dx.doi.org/10.1104/pp.15.01542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4734567PMC
February 2016

Biallelic Gene Targeting in Rice.

Plant Physiol 2016 Feb 14;170(2):667-77. Epub 2015 Dec 14.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan (M.E., M.M., S.T.);Graduate School of Nanobioscience, Yokohama City University, 22-2 Seto, Kanazawa-ku, Yokohama, Kanagawa, 236-0027, Japan (M.M., S.T.); andKihara Institute for Biological Research, Yokohama City University, 641-12 Maioka-cho, Yokohama, Kanagawa, 244-0813, Japan (S.T.)Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602 Japan (M.E., M.M., S.T.); Graduate School of Nanobioscience, Yokohama City University, 22-2, Seto, Kanazawa-ku, Yokohama, Kanagawa, 236-0027, Japan (M.M., S.T.); and Kihara Institute for Biological Research, Yokohama City University, 641-12 Maioka-cho, Yokohama, Kanagawa, 244-0813, Japan (S.T.)

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http://dx.doi.org/10.1104/pp.15.01663DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4734577PMC
February 2016

CRISPR/Cas9-mediated mutagenesis of the RIN locus that regulates tomato fruit ripening.

Biochem Biophys Res Commun 2015 Nov 25;467(1):76-82. Epub 2015 Sep 25.

National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan; Graduate School of Nanobioscience, Yokohama City University, 22-2 Seto, Yokohama, Kanagawa 236-0027, Japan; Kihara Institute for Biological Research, Yokohama City University, 641-12 Maioka-cho, Yokohama, Kanagawa 244-0813, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2015.09.117DOI Listing
November 2015

Parameters affecting frequency of CRISPR/Cas9 mediated targeted mutagenesis in rice.

Plant Cell Rep 2015 Oct 2;34(10):1807-15. Epub 2015 Jul 2.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1007/s00299-015-1826-5DOI Listing
October 2015

A Universal Positive-Negative Selection System for Gene Targeting in Plants Combining an Antibiotic Resistance Gene and Its Antisense RNA.

Plant Physiol 2015 Sep 4;169(1):362-70. Epub 2015 Jul 4.

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, Ibaraki 305-8602, Japan (A.N.-Y., S.N., K.O., H.S., S.T.); Center for Collaboration among Agriculture, Industry and Commerce, University of Tokushima, Tokushima 770-8503, Japan (K.O.); and Kihara Institute for Biological Research, Yokohama City University, Yokohama 244-0813, Japan (S.T.)

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http://dx.doi.org/10.1104/pp.15.00638DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4577407PMC
September 2015

Comparison of CRISPR/Cas9 expression constructs for efficient targeted mutagenesis in rice.

Plant Mol Biol 2015 Aug 19;88(6):561-72. Epub 2015 Jul 19.

Graduate School of Nanobioscience, Yokohama City University, 22-2 Seto, Yokohama, Kanagawa, 236-0027, Japan.

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http://dx.doi.org/10.1007/s11103-015-0342-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4523696PMC
August 2015

Differential responses to high- and low-dose ultraviolet-B stress in tobacco Bright Yellow-2 cells.

Front Plant Sci 2015 21;6:254. Epub 2015 Apr 21.

Department of Integrated Biosciences, Graduated School of Frontier Sciences, The University of Tokyo Kashiwa, Japan.

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http://journal.frontiersin.org/article/10.3389/fpls.2015.002
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http://dx.doi.org/10.3389/fpls.2015.00254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4404814PMC
May 2015

Precision genome editing in plants via gene targeting and piggyBac-mediated marker excision.

Plant J 2015 Jan 10;81(1):160-8. Epub 2014 Nov 10.

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1111/tpj.12693DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4309413PMC
January 2015

Whole-genome analysis of herbicide-tolerant mutant rice generated by Agrobacterium-mediated gene targeting.

Plant Cell Physiol 2015 Jan 4;56(1):116-25. Epub 2014 Nov 4.

Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602 Japan Graduate School of Nanobioscience, Yokohama City University, 22-2 Seto, Kanazawa, Yokohama, 236-0027 Japan

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http://dx.doi.org/10.1093/pcp/pcu153DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4301741PMC
January 2015

Multigene knockout utilizing off-target mutations of the CRISPR/Cas9 system in rice.

Plant Cell Physiol 2015 Jan 11;56(1):41-7. Epub 2014 Nov 11.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602 Japan Graduate School of Nanobioscience, Yokohama City University, 22-2, Seto, Kanazawa-ku, Yokohama, Kanagawa, 236-0027 Japan

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http://dx.doi.org/10.1093/pcp/pcu154DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4301742PMC
January 2015

Positive-negative-selection-mediated gene targeting in rice.

Front Plant Sci 2014 5;5:748. Epub 2015 Jan 5.

Development of Agrobiological Resources, Faculty of Agriculture, Meijo University Nagoya, Japan.

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http://dx.doi.org/10.3389/fpls.2014.00748DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4283509PMC
January 2015

A novel rice cytochrome P450 gene, CYP72A31, confers tolerance to acetolactate synthase-inhibiting herbicides in rice and Arabidopsis.

Plant Physiol 2014 Nov 9;166(3):1232-40. Epub 2014 Jan 9.

Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.)

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http://dx.doi.org/10.1104/pp.113.231266DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4226355PMC
November 2014

The non-homologous end-joining pathway is involved in stable transformation in rice.

Front Plant Sci 2014 17;5:560. Epub 2014 Oct 17.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences Tsukuba, Japan ; Kihara Institute for Biological Research, Yokohama City University Yokohama, Japan.

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http://dx.doi.org/10.3389/fpls.2014.00560DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4201092PMC
November 2014

Function of xyloglucan endotransglucosylase/hydrolases in rice.

Ann Bot 2014 Oct 19;114(6):1309-18. Epub 2013 Dec 19.

Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Sendai, 980-8578, Japan

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http://dx.doi.org/10.1093/aob/mct292DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195539PMC
October 2014

Homologous pairing activities of two rice RAD51 proteins, RAD51A1 and RAD51A2.

PLoS One 2013 4;8(10):e75451. Epub 2013 Oct 4.

Laboratory of Structural Biology, Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku, Tokyo, Japan.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0075451PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3790826PMC
July 2014

Cytochrome P450 CYP81A12 and CYP81A21 Are Associated with Resistance to Two Acetolactate Synthase Inhibitors in Echinochloa phyllopogon.

Plant Physiol 2014 Jun 23;165(2):618-629. Epub 2014 Apr 23.

Graduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan (S.I., T.I.);Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan (M.E., H.S., S.T.);The Japan Association for Advancement of Phyto-Regulators, Ushiku 300-1211, Japan (J.O., N.N., M.Y.); andCrop Production Systems Division, NARO Agricultural Research Center, Tsukuba 305-8666, Japan (H.W., A.U.).

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http://dx.doi.org/10.1104/pp.113.232843DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4044852PMC
June 2014

A mutated cytosine deaminase gene, codA (D314A), as an efficient negative selection marker for gene targeting in rice.

Plant Cell Physiol 2014 Mar 25;55(3):658-65. Epub 2013 Dec 25.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1093/pcp/pct183DOI Listing
March 2014

Precise marker excision system using an animal-derived piggyBac transposon in plants.

Plant J 2014 Feb 9;77(3):454-63. Epub 2013 Dec 9.

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1111/tpj.12367DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4282535PMC
February 2014

A nitrate-inducible GARP family gene encodes an auto-repressible transcriptional repressor in rice.

Plant Cell Physiol 2013 Apr 16;54(4):506-17. Epub 2013 Jan 16.

Biotechnology Research Center, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo, 113-8657 Japan.

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http://dx.doi.org/10.1093/pcp/pct007DOI Listing
April 2013

DNA replication arrest leads to enhanced homologous recombination and cell death in meristems of rice OsRecQl4 mutants.

BMC Plant Biol 2013 Apr 12;13:62. Epub 2013 Apr 12.

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1186/1471-2229-13-62DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3648487PMC
April 2013

Changes in primary and secondary metabolite levels in response to gene targeting-mediated site-directed mutagenesis of the anthranilate synthase gene in rice.

Metabolites 2012 Dec 18;2(4):1123-38. Epub 2012 Dec 18.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.3390/metabo2041123DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3901229PMC
December 2012

Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice.

New Phytol 2012 Dec 10;196(4):1048-59. Epub 2012 Oct 10.

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, Ibaraki, Japan.

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http://dx.doi.org/10.1111/j.1469-8137.2012.04350.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3532656PMC
December 2012

Overexpression of OsRecQl4 and/or OsExo1 enhances DSB-induced homologous recombination in rice.

Plant Cell Physiol 2012 Dec 18;53(12):2142-52. Epub 2012 Nov 18.

Plant Genome Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602 Japan.

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http://dx.doi.org/10.1093/pcp/pcs155DOI Listing
December 2012

Sequential monitoring of transgene expression following Agrobacterium-mediated transformation of rice.

Plant Cell Physiol 2012 Nov 1;53(11):1974-83. Epub 2012 Oct 1.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba, Ibaraki, 305-8602 Japan.

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http://dx.doi.org/10.1093/pcp/pcs135DOI Listing
November 2012

Selection of transgenic rice plants using a herbicide tolerant form of the acetolactate synthase gene.

Methods Mol Biol 2012 ;847:59-66

Plant Genetic Engineering Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Japan.

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http://dx.doi.org/10.1007/978-1-61779-558-9_6DOI Listing
July 2012

Visual selection in rice: a strategy for the efficient identification of transgenic calli accumulating transgene products.

Methods Mol Biol 2012 ;847:67-74

Plant Genetic Engineering Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Japan.

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http://dx.doi.org/10.1007/978-1-61779-558-9_7DOI Listing
July 2012

CDKB2 is involved in mitosis and DNA damage response in rice.

Plant J 2012 Mar 15;69(6):967-77. Epub 2011 Dec 15.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1111/j.1365-313X.2011.04847.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3440594PMC
March 2012

Application of gene targeting to designed mutation breeding of high-tryptophan rice.

Plant Physiol 2011 Jul 4;156(3):1269-77. Epub 2011 May 4.

Plant Genome Engineering Research Unit, Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1104/pp.111.175778DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3135912PMC
July 2011

Molecular and functional analyses of rice NHX-type Na+/H+ antiporter genes.

Planta 2011 Jan 21;233(1):175-88. Epub 2010 Oct 21.

Division of Plant Sciences, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1007/s00425-010-1289-4DOI Listing
January 2011

Mature seed-derived callus of the model indica rice variety Kasalath is highly competent in Agrobacterium-mediated transformation.

Plant Cell Rep 2010 Dec 19;29(12):1351-64. Epub 2010 Sep 19.

Plant Genetic Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1007/s00299-010-0921-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2978894PMC
December 2010

Site-directed mutagenesis in Arabidopsis using custom-designed zinc finger nucleases.

Proc Natl Acad Sci U S A 2010 Jun 27;107(26):12034-9. Epub 2010 May 27.

Plant Genetic Engineering Research Unit, Division of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1000234107
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http://dx.doi.org/10.1073/pnas.1000234107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2900650PMC
June 2010

Metabolome and photochemical analysis of rice plants overexpressing Arabidopsis NAD kinase gene.

Plant Physiol 2010 Apr 12;152(4):1863-73. Epub 2010 Feb 12.

Institute of Molecular and Cellular Biosciences, University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1104/pp.110.153098DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2850022PMC
April 2010

Inefficient double-strand DNA break repair is associated with increased fasciation in Arabidopsis BRCA2 mutants.

J Exp Bot 2009 20;60(9):2751-61. Epub 2009 May 20.

Division of Plant Sciences, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1093/jxb/erp135DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2692019PMC
August 2009

Visual selection allows immediate identification of transgenic rice calli efficiently accumulating transgene products.

Plant Cell Rep 2009 Apr 6;28(4):619-26. Epub 2009 Feb 6.

Plant Genetic Engineering Research Unit, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan.

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http://link.springer.com/10.1007/s00299-009-0671-9
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http://dx.doi.org/10.1007/s00299-009-0671-9DOI Listing
April 2009

Efficient transformation of wheat by using a mutated rice acetolactate synthase gene as a selectable marker.

Plant Cell Rep 2008 Aug 1;27(8):1325-31. Epub 2008 May 1.

Plant Genome Research Unit, National Institute of Agrobiological Sciences, Kan-non-dai 2-1-2, Tsukuba, Ibaraki, 305-8602, Japan.

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http://dx.doi.org/10.1007/s00299-008-0553-6DOI Listing
August 2008

Filament formation and robust strand exchange activities of the rice DMC1A and DMC1B proteins.

Nucleic Acids Res 2008 Aug 26;36(13):4266-76. Epub 2008 Jun 26.

Consolidated Research Institute for Advanced Science and Medical Care, Waseda University, 513 Wasedatsurumaki-cho, Shinjuku-ku, Tokyo 162-0041, Japan.

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http://dx.doi.org/10.1093/nar/gkn405DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2490746PMC
August 2008

A novel NAC transcription factor, IDEF2, that recognizes the iron deficiency-responsive element 2 regulates the genes involved in iron homeostasis in plants.

J Biol Chem 2008 May 28;283(19):13407-17. Epub 2008 Feb 28.

Graduate School of Agricultural and Life Sciences, the University of Tokyo, 1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

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http://dx.doi.org/10.1074/jbc.M708732200DOI Listing
May 2008

Molecular breeding of a novel herbicide-tolerant rice by gene targeting.

Plant J 2007 Oct;52(1):157-66

Plant Genetic Engineering Research Unit, Division of Plant Sciences, National Institute of Agrobiological Sciences, 2-1-2, Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1111/j.1365-313X.2007.03230.xDOI Listing
October 2007

Over-expression of calcium-dependent protein kinase 13 and calreticulin interacting protein 1 confers cold tolerance on rice plants.

Mol Genet Genomics 2007 Jun 21;277(6):713-23. Epub 2007 Feb 21.

National Institute of Crop Science, 2-1-18 Kannondai, Tsukuba 305-8518, Japan.

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http://dx.doi.org/10.1007/s00438-007-0220-6DOI Listing
June 2007

Rice WRKY45 plays a crucial role in benzothiadiazole-inducible blast resistance.

Plant Cell 2007 Jun 29;19(6):2064-76. Epub 2007 Jun 29.

Plant Disease Resistance Research Unit, National Institute of Agrobiological Sciences, Ibaraki, Japan.

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http://www.plantcell.org/lookup/doi/10.1105/tpc.106.046250
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http://dx.doi.org/10.1105/tpc.106.046250DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1955718PMC
June 2007

Isolation and characterization of the RAD54 gene from Arabidopsis thaliana.

Plant J 2006 Dec;48(6):827-42

Plant Genetic Engineering Research Unit, Division of Plant Sciences, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1111/j.1365-313X.2006.02927.xDOI Listing
December 2006

Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice.

Plant J 2006 Sep;47(6):969-76

Plant Genetic Engineering Research Unit, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

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http://dx.doi.org/10.1111/j.1365-313X.2006.02836.xDOI Listing
September 2006

Molecular characterization of true and ectopic gene targeting events at the acetolactate synthase gene in Arabidopsis.

Plant Cell Physiol 2006 Mar 17;47(3):372-9. Epub 2006 Jan 17.

Department of Plant Biotechnology, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1093/pcp/pcj003DOI Listing
March 2006

Arabidopsis RAD51C gene is important for homologous recombination in meiosis and mitosis.

Plant Physiol 2005 Oct 16;139(2):896-908. Epub 2005 Sep 16.

Department of Plant Biotechnology, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1104/pp.105.065243DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1256004PMC
October 2005

Molecular cloning and characterization of RAD51-like genes from Arabidopsis thaliana.

Plant Mol Biol 2002 Sep;50(1):71-81

Department of Plant Biotechnology, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1023/a:1016047231597DOI Listing
September 2002