Sebastien Vigneau

Sebastien Vigneau

UNVERIFIED PROFILE

Are you Sebastien Vigneau?   Register this Author

Register author
Sebastien Vigneau

Sebastien Vigneau

Publications by authors named "Sebastien Vigneau"

Are you Sebastien Vigneau?   Register this Author

16Publications

238Reads

21Profile Views

MaGIC: a machine learning tool set and web application for monoallelic gene inference from chromatin.

BMC Bioinformatics 2019 Feb 28;20(1):106. Epub 2019 Feb 28.

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, 02115, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12859-019-2679-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6394031PMC
February 2019

KDM5 Histone Demethylase Activity Links Cellular Transcriptomic Heterogeneity to Therapeutic Resistance.

Cancer Cell 2018 12 21;34(6):939-953.e9. Epub 2018 Nov 21.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Department of Medicine, Harvard Medical School, Boston, MA 02115, USA; Center for Cancer Evolution, Dana-Farber Cancer Institute, Boston, MA 02215, USA; The Eli and Edythe L Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA; Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Ludwig Center at Harvard, Boston, MA 02215, USA. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S15356108183048
Publisher Site
http://dx.doi.org/10.1016/j.ccell.2018.10.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6310147PMC
December 2018

High prevalence of clonal monoallelic expression.

Nat Genet 2018 09;50(9):1198-1199

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41588-018-0188-7DOI Listing
September 2018

dbMAE: the database of autosomal monoallelic expression.

Nucleic Acids Res 2016 Jan 25;44(D1):D753-6. Epub 2015 Oct 25.

Dana-Farber Cancer Institute and Department of Genetics, Harvard Medical School, 450 Brookline Ave., Boston, MA 02215, USA

View Article

Download full-text PDF

Source
https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
Publisher Site
http://dx.doi.org/10.1093/nar/gkv1106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702807PMC
January 2016

Chromatin Signature Identifies Monoallelic Gene Expression Across Mammalian Cell Types.

G3 (Bethesda) 2015 Jun 18;5(8):1713-20. Epub 2015 Jun 18.

Department of Cancer Biology and Center for Cancer Systems Biology, Dana-Farber Cancer Institute; and Department of Genetics, Harvard Medical School, Boston, Massachusetts 02215

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1534/g3.115.018853DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4528328PMC
June 2015

CTCF binding site sequence differences are associated with unique regulatory and functional trends during embryonic stem cell differentiation.

Nucleic Acids Res 2014 Jan 10;42(2):774-89. Epub 2013 Oct 10.

Department of Cell & Developmental Biology, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA, Program of Gene Expression and Regulation, The Wistar Institute, Philadelphia, PA 19104, USA, Department of Genetics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA and Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkt910DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3902912PMC
January 2014

Autosomal monoallelic expression: genetics of epigenetic diversity?

Curr Opin Genet Dev 2013 Dec 24;23(6):642-8. Epub 2013 Sep 24.

Department of Cancer Biology, Dana-Farber Cancer Institute, Department of Genetics, Harvard Medical School, 450 Brookline Avenue, Boston, MA 02215, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.gde.2013.09.001DOI Listing
December 2013

CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features.

Genome Biol 2009 18;10(11):R131. Epub 2009 Nov 18.

Penn Center for Bioinformatics, Department of Genetics, 415 Curie Boulevard, University of Pennsylvania, Philadelphia, PA 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/gb-2009-10-11-r131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3091324PMC
July 2010

A role for non-coding Tsix transcription in partitioning chromatin domains within the mouse X-inactivation centre.

Epigenetics Chromatin 2009 Jul 20;2(1). Epub 2009 Jul 20.

Unité de Génétique Moléculaire Murine, URA 2578, Institut Pasteur 75724, Paris Cedex 15, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1756-8935-2-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2720958PMC
July 2009

Genomic imprinting mechanisms in mammals.

Mutat Res 2008 Dec 20;647(1-2):77-85. Epub 2008 Aug 20.

Department of Cell and Developmental Biology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.mrfmmm.2008.08.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2645997PMC
December 2008

H19 in the pouch.

Nat Genet 2008 Aug;40(8):932-3

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ng0808-932DOI Listing
August 2008

[Without Tsix, male X chromosome is inactivated].

Med Sci (Paris) 2006 Nov;22(11):926-8

Unité Génétique Moléculaire Murine, CNRS URA 2578, Institut Pasteur, 25, Rue du Docteur Roux, 75724 Paris Cedex 15, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1051/medsci/20062211926DOI Listing
November 2006

An essential role for the DXPas34 tandem repeat and Tsix transcription in the counting process of X chromosome inactivation.

Proc Natl Acad Sci U S A 2006 May 28;103(19):7390-5. Epub 2006 Apr 28.

Génétique Moléculaire Murine, Pasteur Institute, 25 Rue du Docteur Roux, 75015 Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0602381103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1464350PMC
May 2006

Multiple origins of Cajal-Retzius cells at the borders of the developing pallium.

Nat Neurosci 2005 Aug 24;8(8):1002-12. Epub 2005 Jul 24.

Centre National de la Recherche Scientifique-Unité Mixte de Recherche 8542, Ecole Normale Supérieure, 46 rue d'Ulm, 75005 Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nn1511DOI Listing
August 2005