Publications by authors named "Scott VandenBerg"

93Publications

A multi-modal data resource for investigating topographic heterogeneity in patient-derived xenograft tumors.

Sci Data 2019 10 31;6(1):253. Epub 2019 Oct 31.

Department of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California, USA.

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http://dx.doi.org/10.1038/s41597-019-0225-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6823477PMC
October 2019

mTOR activity in AIDS-related diffuse large B-cell lymphoma.

PLoS One 2017 13;12(2):e0170771. Epub 2017 Feb 13.

Division of Clinical Pathology, Department of Pathology, University of California, San Diego, La Jolla, CA, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0170771PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5305194PMC
August 2017

A 22-Year Old Woman with Right Eyelid Swelling.

Brain Pathol 2016 05;26(3):425-6

Department of Neurosciences, Moores Cancer Center.

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http://dx.doi.org/10.1111/bpa.12381DOI Listing
May 2016

Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas.

Authors:
Daniel J Brat Roel G W Verhaak Kenneth D Aldape W K Alfred Yung Sofie R Salama Lee A D Cooper Esther Rheinbay C Ryan Miller Mark Vitucci Olena Morozova A Gordon Robertson Houtan Noushmehr Peter W Laird Andrew D Cherniack Rehan Akbani Jason T Huse Giovanni Ciriello Laila M Poisson Jill S Barnholtz-Sloan Mitchel S Berger Cameron Brennan Rivka R Colen Howard Colman Adam E Flanders Caterina Giannini Mia Grifford Antonio Iavarone Rajan Jain Isaac Joseph Jaegil Kim Katayoon Kasaian Tom Mikkelsen Bradley A Murray Brian Patrick O'Neill Lior Pachter Donald W Parsons Carrie Sougnez Erik P Sulman Scott R Vandenberg Erwin G Van Meir Andreas von Deimling Hailei Zhang Daniel Crain Kevin Lau David Mallery Scott Morris Joseph Paulauskis Robert Penny Troy Shelton Mark Sherman Peggy Yena Aaron Black Jay Bowen Katie Dicostanzo Julie Gastier-Foster Kristen M Leraas Tara M Lichtenberg Christopher R Pierson Nilsa C Ramirez Cynthia Taylor Stephanie Weaver Lisa Wise Erik Zmuda Tanja Davidsen John A Demchok Greg Eley Martin L Ferguson Carolyn M Hutter Kenna R Mills Shaw Bradley A Ozenberger Margi Sheth Heidi J Sofia Roy Tarnuzzer Zhining Wang Liming Yang Jean Claude Zenklusen Brenda Ayala Julien Baboud Sudha Chudamani Mark A Jensen Jia Liu Todd Pihl Rohini Raman Yunhu Wan Ye Wu Adrian Ally J Todd Auman Miruna Balasundaram Saianand Balu Stephen B Baylin Rameen Beroukhim Moiz S Bootwalla Reanne Bowlby Christopher A Bristow Denise Brooks Yaron Butterfield Rebecca Carlsen Scott Carter Lynda Chin Andy Chu Eric Chuah Kristian Cibulskis Amanda Clarke Simon G Coetzee Noreen Dhalla Tim Fennell Sheila Fisher Stacey Gabriel Gad Getz Richard Gibbs Ranabir Guin Angela Hadjipanayis D Neil Hayes Toshinori Hinoue Katherine Hoadley Robert A Holt Alan P Hoyle Stuart R Jefferys Steven Jones Corbin D Jones Raju Kucherlapati Phillip H Lai Eric Lander Semin Lee Lee Lichtenstein Yussanne Ma Dennis T Maglinte Harshad S Mahadeshwar Marco A Marra Michael Mayo Shaowu Meng Matthew L Meyerson Piotr A Mieczkowski Richard A Moore Lisle E Mose Andrew J Mungall Angeliki Pantazi Michael Parfenov Peter J Park Joel S Parker Charles M Perou Alexei Protopopov Xiaojia Ren Jeffrey Roach Thaís S Sabedot Jacqueline Schein Steven E Schumacher Jonathan G Seidman Sahil Seth Hui Shen Janae V Simons Payal Sipahimalani Matthew G Soloway Xingzhi Song Huandong Sun Barbara Tabak Angela Tam Donghui Tan Jiabin Tang Nina Thiessen Timothy Triche David J Van Den Berg Umadevi Veluvolu Scot Waring Daniel J Weisenberger Matthew D Wilkerson Tina Wong Junyuan Wu Liu Xi Andrew W Xu Lixing Yang Travis I Zack Jianhua Zhang B Arman Aksoy Harindra Arachchi Chris Benz Brady Bernard Daniel Carlin Juok Cho Daniel DiCara Scott Frazer Gregory N Fuller JianJiong Gao Nils Gehlenborg David Haussler David I Heiman Lisa Iype Anders Jacobsen Zhenlin Ju Sol Katzman Hoon Kim Theo Knijnenburg Richard Bailey Kreisberg Michael S Lawrence William Lee Kalle Leinonen Pei Lin Shiyun Ling Wenbin Liu Yingchun Liu Yuexin Liu Yiling Lu Gordon Mills Sam Ng Michael S Noble Evan Paull Arvind Rao Sheila Reynolds Gordon Saksena Zack Sanborn Chris Sander Nikolaus Schultz Yasin Senbabaoglu Ronglai Shen Ilya Shmulevich Rileen Sinha Josh Stuart S Onur Sumer Yichao Sun Natalie Tasman Barry S Taylor Doug Voet Nils Weinhold John N Weinstein Da Yang Kosuke Yoshihara Siyuan Zheng Wei Zhang Lihua Zou Ty Abel Sara Sadeghi Mark L Cohen Jenny Eschbacher Eyas M Hattab Aditya Raghunathan Matthew J Schniederjan Dina Aziz Gene Barnett Wendi Barrett Darell D Bigner Lori Boice Cathy Brewer Chiara Calatozzolo Benito Campos Carlos Gilberto Carlotti Timothy A Chan Lucia Cuppini Erin Curley Stefania Cuzzubbo Karen Devine Francesco DiMeco Rebecca Duell J Bradley Elder Ashley Fehrenbach Gaetano Finocchiaro William Friedman Jordonna Fulop Johanna Gardner Beth Hermes Christel Herold-Mende Christine Jungk Ady Kendler Norman L Lehman Eric Lipp Ouida Liu Randy Mandt Mary McGraw Roger Mclendon Christopher McPherson Luciano Neder Phuong Nguyen Ardene Noss Raffaele Nunziata Quinn T Ostrom Cheryl Palmer Alessandro Perin Bianca Pollo Alexander Potapov Olga Potapova W Kimryn Rathmell Daniil Rotin Lisa Scarpace Cathy Schilero Kelly Senecal Kristen Shimmel Vsevolod Shurkhay Suzanne Sifri Rosy Singh Andrew E Sloan Kathy Smolenski Susan M Staugaitis Ruth Steele Leigh Thorne Daniela P C Tirapelli Andreas Unterberg Mahitha Vallurupalli Yun Wang Ronald Warnick Felicia Williams Yingli Wolinsky Sue Bell Mara Rosenberg Chip Stewart Franklin Huang Jonna L Grimsby Amie J Radenbaugh Jianan Zhang
June 2015

A urokinase receptor-Bim signaling axis emerges during EGFR inhibitor resistance in mutant EGFR glioblastoma.

Cancer Res 2015 Jan 28;75(2):394-404. Epub 2014 Nov 28.

Ludwig Institute for Cancer Research, La Jolla, California. Department of Pathology, University of California San Diego, La Jolla, California. The Moores Cancer Center, University of California San Diego, La Jolla, California.

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http://dx.doi.org/10.1158/0008-5472.CAN-14-2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4297573PMC
January 2015

Epigenetic suppression of EGFR signaling in G-CIMP+ glioblastomas.

Oncotarget 2014 Sep;5(17):7342-56

Center for Theoretical and Applied Neuro-Oncology, Division of Neurosurgery, University of California, San Diego.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4202127PMC
http://dx.doi.org/10.18632/oncotarget.2350DOI Listing
September 2014

Combining diffusion and perfusion differentiates tumor from bevacizumab-related imaging abnormality (bria).

J Neurooncol 2014 Dec 19;120(3):539-46. Epub 2014 Aug 19.

Department of Radiology, University of California, San Diego, 200 West Arbor Drive, MC 0834, San Diego, CA, 92103-0834, USA,

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http://dx.doi.org/10.1007/s11060-014-1583-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5422105PMC
December 2014

72 year old female with leg weakness.

Brain Pathol 2014 Mar;24(2):195-6

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http://dx.doi.org/10.1111/bpa.12123DOI Listing
March 2014

Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma.

Nature 2014 Jul 22;511(7510):428-34. Epub 2014 Jun 22.

1] Division of Pediatric Neurooncology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, Heidelberg 69120, Germany [2] Department of Pediatric Oncology, Hematology & Immunology, Heidelberg University Hospital, Im Neuenheimer Feld 430, Heidelberg 69120, Germany.

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http://www.abta.org/resources/enhancers-hijacking-activates.
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http://www.nature.com/doifinder/10.1038/nature13379
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http://dx.doi.org/10.1038/nature13379DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4201514PMC
July 2014

Predicting Mycobacterium tuberculosis complex clades using knowledge-based Bayesian networks.

Biomed Res Int 2014 23;2014:398484. Epub 2014 Apr 23.

Department of Computer Science, Rensselaer Polytechnic Institute, Troy, NY 12180, USA ; Department of Mathematical Sciences, Rensselaer Polytechnic Institute, Troy, NY 12180, USA.

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http://dx.doi.org/10.1155/2014/398484DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4016944PMC
January 2015

Pediatric phase II trials of poly-ICLC in the management of newly diagnosed and recurrent brain tumors.

J Pediatr Hematol Oncol 2014 Aug;36(6):451-7

Departments of *Pediatrics §Neuro-oncology #Pathology (Division of Neuropathology), Moores UCSD Cancer Center †Pediatrics ‡Neurosciences/Pediatrics, Rady Children's Hospital, University of California San Diego, La Jolla, CA ∥Oncovir Inc. ¶Children's Oncology Group, Childrens Hospital of Orange County, Orange, CA **Department of Pediatrics, Emory University, AFLAC Cancer Center, Children's Healthcare of Atlanta, Atlanta, GA.

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http://dx.doi.org/10.1097/MPH.0000000000000047DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356196PMC
August 2014

Restriction-Spectrum Imaging of Bevacizumab-Related Necrosis in a Patient with GBM.

Front Oncol 2013 30;3:258. Epub 2013 Sep 30.

Department of Radiology, University of California San Diego , San Diego, CA , USA ; Multimodal Imaging Laboratory, University of California San Diego , San Diego, CA , USA.

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http://dx.doi.org/10.3389/fonc.2013.00258DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3786386PMC
October 2013

78 year old male with dysphagia and dysarthria.

Brain Pathol 2013 Nov;23(6):705-6

Department of Neurosciences, Moores Cancer Center, University of California, San Diego, La Jolla, CA.

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http://dx.doi.org/10.1111/bpa.12093DOI Listing
November 2013

Myeloid cell receptor LRP1/CD91 regulates monocyte recruitment and angiogenesis in tumors.

Cancer Res 2013 Jul 30;73(13):3902-12. Epub 2013 Apr 30.

Department of Pathology, University of California San Diego School of Medicine, La Jolla, California, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-12-4233DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3702673PMC
July 2013

Loss of acinar cell IKKα triggers spontaneous pancreatitis in mice.

J Clin Invest 2013 May 8;123(5):2231-43. Epub 2013 Apr 8.

Laboratory of Gene Regulation and Signal Transduction, Departments of Pharmacology and Pathology, School of Medicine, UCSD, La Jolla, California 92093-0723, USA.

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http://dx.doi.org/10.1172/JCI64498DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3635720PMC
May 2013

Role of connexins in metastatic breast cancer and melanoma brain colonization.

J Cell Sci 2013 Feb 15;126(Pt 4):904-13. Epub 2013 Jan 15.

Department of Pathology, University of California, San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1242/jcs.112748DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625812PMC
February 2013

Expression of miR-124 inhibits growth of medulloblastoma cells.

Neuro Oncol 2013 Jan 21;15(1):83-90. Epub 2012 Nov 21.

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, San Francisco, California 94143, USA.

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http://dx.doi.org/10.1093/neuonc/nos281DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3534424PMC
January 2013

Recurrent pediatric central nervous system low-grade gliomas: the role of surveillance neuroimaging in asymptomatic children.

J Neurosurg Pediatr 2013 Feb 16;11(2):119-26. Epub 2012 Nov 16.

Department of Pediatrics, University of California, San Diego, Rady Children's Hospital-San Diego, California 92123, USA.

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http://dx.doi.org/10.3171/2012.10.PEDS12307DOI Listing
February 2013

Epidemiological models of Mycobacterium tuberculosis complex infections.

Math Biosci 2012 Apr 1;236(2):77-96. Epub 2012 Mar 1.

Computer Science Department, Rensselaer Polytechnic Institute, Troy, NY, USA.

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http://dx.doi.org/10.1016/j.mbs.2012.02.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3330831PMC
April 2012

Sublineage structure analysis of Mycobacterium tuberculosis complex strains using multiple-biomarker tensors.

BMC Genomics 2011 27;12 Suppl 2:S1. Epub 2011 Jul 27.

Computer Science Department, Rensselaer Polytechnic Institute, Troy, NY, USA.

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http://dx.doi.org/10.1186/1471-2164-12-S2-S1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3194230PMC
January 2012

Crosstalk between the urokinase-type plasminogen activator receptor and EGF receptor variant III supports survival and growth of glioblastoma cells.

Proc Natl Acad Sci U S A 2011 Sep 6;108(38):15984-9. Epub 2011 Sep 6.

Department of Pathology, University of California at San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1073/pnas.1113416108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3179096PMC
September 2011

OLIG2 is differentially expressed in pediatric astrocytic and in ependymal neoplasms.

J Neurooncol 2011 Sep 31;104(2):423-38. Epub 2010 Dec 31.

Division of Neuropathology, Department of Pathology, University of California, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1007/s11060-010-0509-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3161192PMC
September 2011

Blocking the mitochondrial apoptotic pathway preserves motor neuron viability and function in a mouse model of amyotrophic lateral sclerosis.

J Clin Invest 2010 Oct 20;120(10):3673-9. Epub 2010 Sep 20.

Department of Pathology, University of California, San Francisco, San Francisco, California 94143-0511, USA.

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http://dx.doi.org/10.1172/JCI42986DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2947232PMC
October 2010

Ex vivo MR spectroscopic measure differentiates tumor from treatment effects in GBM.

Neuro Oncol 2010 Nov 20;12(11):1152-61. Epub 2010 Jul 20.

Department of Radiology and Biomedical Imaging, 1700 4th Street, Byers Hall, Suite 301, San Francisco, CA 94143-2532, USA.

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http://dx.doi.org/10.1093/neuonc/noq075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098023PMC
November 2010

Gene expression profiles help identify the tissue of origin for metastatic brain cancers.

Diagn Pathol 2010 Apr 26;5:26. Epub 2010 Apr 26.

Department of Laboratory Medicine, University of California-San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1186/1746-1596-5-26DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2867958PMC
April 2010

Morphologic and molecular characterization of ATRT xenografts adapted for orthotopic therapeutic testing.

Neuro Oncol 2010 Apr 11;12(4):366-76. Epub 2010 Jan 11.

Brain Tumor Research Center, Department of Neurological Surgery, University ofCalifornia, San Diego, CA, USA.

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http://dx.doi.org/10.1093/neuonc/nop033DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2940601PMC
April 2010

Hyperpolarized 13C magnetic resonance metabolic imaging: application to brain tumors.

Neuro Oncol 2010 Feb 25;12(2):133-44. Epub 2010 Jan 25.

Joint Graduate Group in Bioengineering, Surbeck Laboratory of Advanced Imaging, University of California-San Francisco/Berkeley, 1700 4th Street, Byers Hall, Room BH-303, San Francisco, CA 94158-2532, USA.

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http://dx.doi.org/10.1093/neuonc/nop043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2940577PMC
February 2010

Examining the sublineage structure of Mycobacterium tuberculosis complex strains with multiple-biomarker tensors.

Proceedings (IEEE Int Conf Bioinformatics Biomed) 2010 :543-548

Computer Science Department, Rensselaer Polytechnic Institute, Troy, NY USA.

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http://dx.doi.org/10.1109/BIBM.2010.5706625DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315393PMC
January 2010

Post-radiation reactive changes in a single vertebral body mimicking metastatic pineoblastoma.

J Neurosurg Pediatr 2009 Nov;4(5):479-83

Departments of Neurological Surgery, University of California San Francisco, California, USA.

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http://dx.doi.org/10.3171/2009.6.PEDS09266DOI Listing
November 2009

Tumor regrowth between surgery and initiation of adjuvant therapy in patients with newly diagnosed glioblastoma.

Neuro Oncol 2009 Dec;11(6):842-52

Department of Radiology and Margaret Hart Surbeck Laboratory of Advanced Imaging, University of California, San Francisco, San Francisco, CA, USA.

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http://dx.doi.org/10.1215/15228517-2009-005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2802404PMC
December 2009

Apparent diffusion coefficient and fractional anisotropy of newly diagnosed grade II gliomas.

NMR Biomed 2009 May;22(4):449-55

UCSF/UCB Joint Graduate Group in Bioengineering, University of California, San Francisco, CA, USA.

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http://dx.doi.org/10.1002/nbm.1357DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3772178PMC
May 2009

The neurofibromatosis 2 tumor suppressor gene product, merlin, regulates human meningioma cell growth by signaling through YAP.

Neoplasia 2008 Nov;10(11):1204-12

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, CA 94143, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2570596PMC
http://dx.doi.org/10.1593/neo.08642DOI Listing
November 2008

Multiway modeling and analysis in stem cell systems biology.

BMC Syst Biol 2008 Jul 14;2:63. Epub 2008 Jul 14.

Department of Computer Science, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA.

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http://dx.doi.org/10.1186/1752-0509-2-63DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2527292PMC
July 2008

The 2007 WHO classification of tumors of the nervous system: controversies in surgical neuropathology.

Brain Pathol 2008 Jul;18(3):307-16

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1111/j.1750-3639.2008.00179.xDOI Listing
July 2008

Matrix metalloproteinase-2 regulates vascular patterning and growth affecting tumor cell survival and invasion in GBM.

Neuro Oncol 2008 Jun 21;10(3):254-64. Epub 2008 Mar 21.

Department of Neurological Surgery, University of California San Francisco, 513 Parnassus Ave., Box 0520, San Francisco, CA 94143-0520, USA.

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http://dx.doi.org/10.1215/15228517-2008-001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2563048PMC
June 2008

Role of extent of resection in the long-term outcome of low-grade hemispheric gliomas.

J Clin Oncol 2008 Mar;26(8):1338-45

Department of Neurological Surgery, Brain Tumor Research Center, University of California San Francisco, 505 Parnassus Ave, Room M-779, San Francisco, CA 94143-0112, USA.

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http://ascopubs.org/doi/10.1200/JCO.2007.13.9337
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http://dx.doi.org/10.1200/JCO.2007.13.9337DOI Listing
March 2008

Safety of real-time convection-enhanced delivery of liposomes to primate brain: a long-term retrospective.

Exp Neurol 2008 Apr 27;210(2):638-44. Epub 2007 Dec 27.

Laboratory for Molecular Therapeutics, Department of Neurological Surgery, University of California San Francisco, San Francisco, CA 94103, USA.

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http://dx.doi.org/10.1016/j.expneurol.2007.12.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2362104PMC
April 2008

An orthotopic skull base model of malignant meningioma.

Brain Pathol 2008 Apr 17;18(2):172-9. Epub 2007 Dec 17.

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1111/j.1750-3639.2007.00109.xDOI Listing
April 2008

Proteomics reveals multiple routes to the osteogenic phenotype in mesenchymal stem cells.

BMC Genomics 2007 Oct 19;8:380. Epub 2007 Oct 19.

Department of Mathematical Sciences, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA.

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http://dx.doi.org/10.1186/1471-2164-8-380DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2148065PMC
October 2007

Molecular signatures define two main classes of meningiomas.

Mol Cancer 2007 Oct 15;6:64. Epub 2007 Oct 15.

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, CA-94143, USA.

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http://molecular-cancer.biomedcentral.com/articles/10.1186/1
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http://dx.doi.org/10.1186/1476-4598-6-64DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2173907PMC
October 2007

Relationship of glioblastoma multiforme to neural stem cell regions predicts invasive and multifocal tumor phenotype.

Neuro Oncol 2007 Oct 10;9(4):424-9. Epub 2007 Jul 10.

Department of Neurological Surgery, University of California, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1215/15228517-2007-023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994099PMC
October 2007

Methylation of the PTEN promoter defines low-grade gliomas and secondary glioblastoma.

Neuro Oncol 2007 Jul 15;9(3):271-9. Epub 2007 May 15.

Department of Neurological Surgery and Brain Tumor Research Center, University of California, San Francisco, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1215/15228517-2007-003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1907411PMC
July 2007

In vivo efficacy of a novel histone deacetylase inhibitor in combination with radiation for the treatment of gliomas.

Neuro Oncol 2007 Apr 8;9(2):82-8. Epub 2007 Mar 8.

Department of Radiation Oncology, Neurological Surgery, and Comprehensive Cancer Center, University of California, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1215/15228517-2006-032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1871664PMC
April 2007

Laminin-5 activates extracellular matrix production and osteogenic gene focusing in human mesenchymal stem cells.

Matrix Biol 2007 Mar 13;26(2):106-14. Epub 2006 Oct 13.

Department of Biology, Rensselaer Polytechnic Institute, Troy, NY 12180-3596, USA.

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http://dx.doi.org/10.1016/j.matbio.2006.10.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1852504PMC
March 2007

Genome-wide hypomethylation in human glioblastomas associated with specific copy number alteration, methylenetetrahydrofolate reductase allele status, and increased proliferation.

Cancer Res 2006 Sep;66(17):8469-76

The Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, CA 94143-0875, USA.

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http://cancerres.aacrjournals.org/lookup/doi/10.1158/0008-54
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http://dx.doi.org/10.1158/0008-5472.CAN-06-1547DOI Listing
September 2006

PDGFR alpha-positive B cells are neural stem cells in the adult SVZ that form glioma-like growths in response to increased PDGF signaling.

Neuron 2006 Jul;51(2):187-99

Department of Neurological Surgery and Program in Developmental and Stem Cell Biology, University of California, San Francisco, San Francisco, California 94143, USA.

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http://dx.doi.org/10.1016/j.neuron.2006.06.012DOI Listing
July 2006

A genetic strategy to overcome the senescence of primary meningioma cell cultures.

J Neurooncol 2006 Jun 23;78(2):113-21. Epub 2006 Mar 23.

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1007/s11060-005-9076-yDOI Listing
June 2006

Focusing of gene expression as the basis of stem cell differentiation.

Stem Cells Dev 2005 Dec;14(6):608-20

Department of Biology, Rensselaer Polytechnic Institute, Troy, NY 12180-3596, USA.

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http://dx.doi.org/10.1089/scd.2005.14.608DOI Listing
December 2005

Butyric acid prodrugs are histone deacetylase inhibitors that show antineoplastic activity and radiosensitizing capacity in the treatment of malignant gliomas.

Mol Cancer Ther 2005 Dec;4(12):1952-61

Comprehensive Cancer Center, University of California at San Francisco, 2340 Sutter Street, San Francisco, CA 94115, USA.

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http://dx.doi.org/10.1158/1535-7163.MCT-05-0087DOI Listing
December 2005

Bromophenol blue staining of tumors in a rat glioma model.

Neurosurgery 2005 Nov;57(5):1041-7; discussion 1041-7

Department of Neurological Surgery, Brain Tumor Research Center, University of California, San Francisco, California, USA.

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http://dx.doi.org/10.1227/01.neu.0000180036.42193.f6DOI Listing
November 2005

Comparing the protein expression profiles of human mesenchymal stem cells and human osteoblasts using gene ontologies.

Stem Cells Dev 2005 Aug;14(4):354-66

Department of Biology, Rensselaer Polytechnic Institute, Troy, NY 12180-3596, USA.

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http://dx.doi.org/10.1089/scd.2005.14.354DOI Listing
August 2005

Mitochondrial DNA depletion analysis by pseudogene ratioing.

J Neurosci Methods 2006 Jan 22;150(2):265-71. Epub 2005 Aug 22.

Department of Neurology, University of Virginia Health System, Box 394, Charlottesville, VA 22908, USA.

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http://dx.doi.org/10.1016/j.jneumeth.2005.06.023DOI Listing
January 2006

Indicators of hippocampal neurogenesis are altered by 56Fe-particle irradiation in a dose-dependent manner.

Radiat Res 2004 Oct;162(4):442-6

Department of Neurological Surgery, University of California, San Francisco, San Francisco, California 94143, USA.

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http://dx.doi.org/10.1667/rr3234DOI Listing
October 2004

Radiation-induced impairment of hippocampal neurogenesis is associated with cognitive deficits in young mice.

Exp Neurol 2004 Aug;188(2):316-30

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, 94143, USA.

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http://dx.doi.org/10.1016/j.expneurol.2004.05.005DOI Listing
August 2004

Radiation-induced cognitive impairments are associated with changes in indicators of hippocampal neurogenesis.

Radiat Res 2004 Jul;162(1):39-47

Department of Behavioral Neuroscience, Oregon Health & Science University, Portland, Oregon, 97239, USA.

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http://dx.doi.org/10.1667/rr3206DOI Listing
July 2004

Intracranial metastasis of a primary scalp angiosarcoma. Case illustration.

J Neurosurg 2002 Sep;97(3):725

Department of Neurological Surgery, University of Virginia Health Sciences Center, Charlottesville 22908, USA.

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http://dx.doi.org/10.3171/jns.2002.97.3.0725DOI Listing
September 2002

Immunophenotype of pleomorphic xanthoastrocytoma.

Am J Surg Pathol 2002 Apr;26(4):479-85

Department of Pathology, Mayo Clinic, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1097/00000478-200204000-00010DOI Listing
April 2002