Publications by authors named "Scott Tomlins"

226Publications

[Molecular pathology of urogenital tumors : Recommendations from the 2019 International Society of Urological Pathology (ISUP) Consensus Conference].

Authors:
Oliver Hommerding Yves Allory Pedram Argani Tarek A Bismar Lukas Bubendorf Sofía Canete-Portillo Alcides Chaux Ying-Bei Chen Liang Cheng Antonio L Cubilla Lars Egevad Anthony J Gill David J Grignon Arndt Hartmann Ondrej Hes Muhammad T Idrees Chia-Sui Kao Margaret A Knowles Leendert H J Looijenga Tamara L Lotan Colin C Pritchard Mark A Rubin Scott A Tomlins Theodorus H Van der Kwast Elsa F Velazquez Joshua I Warrick Sean R Williamson Glen Kristiansen

Pathologe 2021 Jan 4. Epub 2021 Jan 4.

Institut für Pathologie, Universitätsklinikum Bonn, Venusberg-Campus 1, Gebäude 62, 53127, Bonn, Deutschland.

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January 2021

TP53 mutations and CDKN2A mutations/deletions are highly recurrent molecular alterations in the malignant progression of sinonasal papillomas.

Authors:
Noah A Brown Komal R Plouffe Osman Yilmaz Steven C Weindorf Bryan L Betz Thomas E Carey Raja R Seethala Jonathan B McHugh Scott A Tomlins Aaron M Udager

Mod Pathol 2020 Nov 17. Epub 2020 Nov 17.

Department of Pathology, University of Michigan Medical School, Ann Arbor, MI, USA.

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November 2020

Photoacoustic spectral analysis at ultraviolet wavelengths for characterizing the Gleason grades of prostate cancer.

Authors:
Janggun Jo Javed Siddiqui Yunhao Zhu Linyu Ni Sri-Rajasekhar Kothapalli Scott A Tomlins John T Wei Evan T Keller Aaron M Udager Xueding Wang Guan Xu

Opt Lett 2020 Nov;45(21):6042-6045

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November 2020

Use of the MyProstateScore Test to Rule Out Clinically Significant Cancer: Validation of a Straightforward Clinical Testing Approach.

Authors:
Jeffrey J Tosoian Bruce J Trock Todd M Morgan Simpa S Salami Scott A Tomlins Daniel E Spratt Javed Siddiqui Lakshmi P Kunju Rachel Botbyl Zoey Chopra Balaji Pandian Nicholas W Eyrich Gary Longton Yingye Zheng Ganesh S Palapattu John T Wei Yashar S Niknafs Arul M Chinnaiyan

J Urol 2020 Oct 20:101097JU0000000000001430. Epub 2020 Oct 20.

Department of Urology, University of Michigan, Ann Arbor, Michigan.

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October 2020

Prevalence of Somatic Mutations in Aldosterone-Producing Adenomas in Japanese Patients.

Authors:
Kazutaka Nanba Yuto Yamazaki Nolan Bick Kei Onodera Yuta Tezuka Kei Omata Yoshikiyo Ono Amy R Blinder Scott A Tomlins William E Rainey Fumitoshi Satoh Hironobu Sasano

J Clin Endocrinol Metab 2020 Nov;105(11)

Department of Pathology, Tohoku University Graduate School of Medicine, Sendai, Japan.

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November 2020

Targeted RNAseq of Formalin-Fixed Paraffin-Embedded Tissue to Differentiate Among Benign and Malignant Adrenal Cortical Tumors.

Authors:
Samuel W Plaska Chia-Jen Liu Jung Soo Lim Juilee Rege Nolan R Bick Antonio M Lerario Gary D Hammer Thomas J Giordano Tobias Else Scott A Tomlins William E Rainey Aaron M Udager

Horm Metab Res 2020 Aug 13;52(8):607-613. Epub 2020 Aug 13.

Michigan Center for Translational Pathology, Ann Arbor, Michigan, USA.

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August 2020

Impact of the MyProstateScore (MPS) Test on the Clinical Decision to Undergo Prostate Biopsy: Results From a Contemporary Academic Practice.

Authors:
Amir H Lebastchi Christopher M Russell Yashar S Niknafs Nicholas W Eyrich Zoey Chopra Rachel Botbyl Rana Kabeer Takahiro Osawa Javed Siddiqui Rabia Siddiqui Matthew S Davenport Rohit Mehra Scott A Tomlins Lakshimi P Kunju Arul M Chinnaiyan John T Wei Jeffrey J Tosoian Todd M Morgan

Urology 2020 Nov 8;145:204-210. Epub 2020 Aug 8.

Department of Urology, University of Michigan, Ann Arbor, MI; Rogel Cancer Center, University of Michigan, Ann Arbor, MI; Michigan Center for Translational Pathology, University of Michigan, Ann Arbor, MI.

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November 2020

Development and Validation of a Deep-learning Model to Assist With Renal Cell Carcinoma Histopathologic Interpretation.

Authors:
Michael Fenstermaker Scott A Tomlins Karandeep Singh Jenna Wiens Todd M Morgan

Urology 2020 Oct 22;144:152-157. Epub 2020 Jul 22.

Department of Urology, University of Michigan, Ann Arbor, MI; University of Michigan Rogel Cancer Center, Ann Arbor, MI.

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October 2020

The DNA methylation landscape of advanced prostate cancer.

Authors:
Shuang G Zhao William S Chen Haolong Li Adam Foye Meng Zhang Martin Sjöström Rahul Aggarwal Denise Playdle Arnold Liao Joshi J Alumkal Rajdeep Das Jonathan Chou Junjie T Hua Travis J Barnard Adina M Bailey Eric D Chow Marc D Perry Ha X Dang Rendong Yang Ruhollah Moussavi-Baygi Li Zhang Mohammed Alshalalfa S Laura Chang Kathleen E Houlahan Yu-Jia Shiah Tomasz M Beer George Thomas Kim N Chi Martin Gleave Amina Zoubeidi Robert E Reiter Matthew B Rettig Owen Witte M Yvonne Kim Lawrence Fong Daniel E Spratt Todd M Morgan Rohit Bose Franklin W Huang Hui Li Lisa Chesner Tanushree Shenoy Hani Goodarzi Irfan A Asangani Shahneen Sandhu Joshua M Lang Nupam P Mahajan Primo N Lara Christopher P Evans Phillip Febbo Serafim Batzoglou Karen E Knudsen Housheng H He Jiaoti Huang Wilbert Zwart Joseph F Costello Jianhua Luo Scott A Tomlins Alexander W Wyatt Scott M Dehm Alan Ashworth Luke A Gilbert Paul C Boutros Kyle Farh Arul M Chinnaiyan Christopher A Maher Eric J Small David A Quigley Felix Y Feng

Nat Genet 2020 08 13;52(8):778-789. Epub 2020 Jul 13.

Department of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA.

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August 2020

Serial Molecular Profiling of Low-grade Prostate Cancer to Assess Tumor Upgrading: A Longitudinal Cohort Study.

Authors:
Simpa S Salami Jeffrey J Tosoian Srinivas Nallandhighal Tonye A Jones Scott Brockman Fuad F Elkhoury Selena Bazzi Komal R Plouffe Javed Siddiqui Chia-Jen Liu Lakshmi P Kunju Todd M Morgan Shyam Natarajan Philip S Boonstra Lauren Sumida Scott A Tomlins Aaron M Udager Anthony E Sisk Leonard S Marks Ganesh S Palapattu

Eur Urol 2020 Jul 3. Epub 2020 Jul 3.

Department of Urology, Michigan Medicine, Ann Arbor, MI, USA; University of Michigan Rogel Cancer Center, Ann Arbor, MI, USA; Department of Urology, Medical University of Vienna, Vienna, Austria.

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July 2020

The MD Anderson Prostate Cancer Patient-derived Xenograft Series (MDA PCa PDX) Captures the Molecular Landscape of Prostate Cancer and Facilitates Marker-driven Therapy Development.

Authors:
Nallasivam Palanisamy Jun Yang Peter D A Shepherd Elsa M Li-Ning-Tapia Estefania Labanca Ganiraju C Manyam Murali K Ravoori Vikas Kundra John C Araujo Eleni Efstathiou Louis L Pisters Xinhai Wan Xuemei Wang Elba S Vazquez Ana M Aparicio Shannon L Carskadon Scott A Tomlins Lakshmi P Kunju Arul M Chinnaiyan Bradley M Broom Christopher J Logothetis Patricia Troncoso Nora M Navone

Clin Cancer Res 2020 Sep 23;26(18):4933-4946. Epub 2020 Jun 23.

Department of Genitourinary Medical Oncology and the David H. Koch Center for Applied Research of Genitourinary Cancers, The University of Texas MD Anderson Cancer Center, Houston, Texas.

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September 2020

A genomic survey of sarcomas on sun-exposed skin reveals distinctive candidate drivers and potentially targetable mutations.

Authors:
Timothy I Miller Nicholas A Zoumberos Bryan Johnson Daniel R Rhodes Scott A Tomlins May P Chan Aleodor A Andea David R Lucas Jonathan B McHugh Noah Smith Kelly L Harms Chad Brewer Jasmine Saleh Rajiv M Patel Paul W Harms

Hum Pathol 2020 Aug 12;102:60-69. Epub 2020 Jun 12.

Department of Pathology, University of Michigan, 2800 Plymouth Road, Ann Arbor, MI, 48109, USA; Department of Dermatology, University of Michigan, 1500 E. Medical Center Drive, Ann Arbor, MI, 48109, USA; Rogel Cancer Center, University of Michigan, 1500 E. Medical Center Drive Ann Arbor, MI, 48109, USA. Electronic address:

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August 2020

Invasive squamous cell carcinomas and precursor lesions on UV-exposed epithelia demonstrate concordant genomic complexity in driver genes.

Authors:
Lorena Lazo de la Vega Nolan Bick Kevin Hu Samantha E Rahrig Camilla Duarte Silva Suzana Matayoshi Patricia Picciarelli Xiaoming Wang Alan Sugar Hunson Kaz Soong Shahzad I Mian Dan R Robinson Arul M Chinnaiyan Hakan Demirci Anthony B Daniels Francis Worden Charles G Eberhart Scott A Tomlins Rajesh C Rao Paul W Harms

Mod Pathol 2020 11 27;33(11):2280-2294. Epub 2020 May 27.

Department of Pathology, University of Michigan Medical School, Ann Arbor, MI, USA.

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November 2020

The role of the histone H3 variant CENPA in prostate cancer.

Authors:
Anjan K Saha Rafael Contreras-Galindo Yashar S Niknafs Matthew Iyer Tingting Qin Karthik Padmanabhan Javed Siddiqui Monica Palande Claire Wang Brian Qian Elizabeth Ward Tara Tang Scott A Tomlins Scott D Gitlin Maureen A Sartor Gilbert S Omenn Arul M Chinnaiyan David M Markovitz

J Biol Chem 2020 06 5;295(25):8537-8549. Epub 2020 May 5.

Program in Cancer Biology, University of Michigan, Ann Arbor, Michigan, USA

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June 2020

Next-generation sequencing identifies recurrent copy number variations in invasive breast carcinomas from Ghana.

Authors:
Talha Anwar Miguel L Rufail Sabra I Djomehri Maria E Gonzalez Lorena Lazo de la Vega Scott A Tomlins Lisa A Newman Celina G Kleer

Mod Pathol 2020 08 9;33(8):1537-1545. Epub 2020 Mar 9.

Department of Pathology, University of Michigan Medical School, Ann Arbor, MI, USA.

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August 2020

Report From the International Society of Urological Pathology (ISUP) Consultation Conference on Molecular Pathology of Urogenital Cancers. I. Molecular Biomarkers in Prostate Cancer.

Authors:
Tamara L Lotan Scott A Tomlins Tarek A Bismar Theodorus H Van der Kwast David Grignon Lars Egevad Glen Kristiansen Colin C Pritchard Mark A Rubin Lukas Bubendorf

Am J Surg Pathol 2020 07;44(7):e15-e29

Institute of Pathology, University Hospital Basel, Basel, Switzerland.

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July 2020

A conserved intratumoral regulatory T cell signature identifies 4-1BB as a pan-cancer target.

Authors:
Zachary T Freeman Thomas R Nirschl Daniel H Hovelson Robert J Johnston John J Engelhardt Mark J Selby Christina M Kochel Ruth Y Lan Jingyi Zhai Ali Ghasemzadeh Anuj Gupta Alyza M Skaist Sarah J Wheelan Hui Jiang Alexander T Pearson Linda A Snyder Alan J Korman Scott A Tomlins Srinivasan Yegnasubramanian Charles G Drake

J Clin Invest 2020 03;130(3):1405-1416

Department of Oncology and.

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March 2020

Somatic Mutation As a Cause of Aldosterone-Producing Adenoma.

Authors:
Kazutaka Nanba Amy R Blinder Juilee Rege Namita G Hattangady Tobias Else Chia-Jen Liu Scott A Tomlins Pankaj Vats Chandan Kumar-Sinha Thomas J Giordano William E Rainey

Hypertension 2020 Mar 27;75(3):645-649. Epub 2020 Jan 27.

From the Department of Molecular and Integrative Physiology, University of Michigan, Ann Arbor (K.N., A.R.B., J.R., W.E.R.).

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March 2020

Deletions are Associated with Metastasis in African American Men with Clinically Localized, Surgically Treated Prostate Cancer.

Authors:
Farzana A Faisal Sanjana Murali Harsimar Kaur Thiago Vidotto Liana B Guedes Daniela Correia Salles Vishal Kothari Jeffrey J Tosoian Sumin Han Daniel H Hovelson Kevin Hu Daniel E Spratt Alexander S Baras Scott A Tomlins Edward M Schaeffer Tamara L Lotan

Clin Cancer Res 2020 06 22;26(11):2595-2602. Epub 2020 Jan 22.

Brady Urological Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland.

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June 2020

Next-generation sequencing implicates oncogenic roles for p53 and JAK/STAT signaling in microcystic adnexal carcinomas.

Authors:
May P Chan Komal R Plouffe Chia-Jen Liu Nallasivam Palanisamy Shannon Carskadon Lili Zhao Rosalynn M Nazarian Alison B Durham Timothy M Johnson Aleodor A Andea Rajiv M Patel Lori Lowe Douglas R Fullen Noah A Brown Scott A Tomlins Aaron M Udager Paul W Harms

Mod Pathol 2020 06 19;33(6):1092-1103. Epub 2019 Dec 19.

Department of Pathology, Michigan Medicine, University of Michigan, Ann Arbor, MI, USA.

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June 2020