Scott Huntsman

Scott Huntsman

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Scott Huntsman

Scott Huntsman

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An admixture mapping meta-analysis implicates genetic variation at 18q21 with asthma susceptibility in Latinos.

J Allergy Clin Immunol 2019 03 7;143(3):957-969. Epub 2018 Sep 7.

Program in Pharmaceutical Sciences and Pharmacogenomics, University of California, San Francisco, San Francisco, Calif; Department of Bioengineering & Therapeutic Sciences, University of California, San Francisco, San Francisco, Calif; Department of Medicine, University of California, San Francisco, San Francisco, Calif.

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https://linkinghub.elsevier.com/retrieve/pii/S00916749183127
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http://dx.doi.org/10.1016/j.jaci.2016.08.057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6927816PMC
March 2019

Identification of novel common breast cancer risk variants at the 6q25 locus among Latinas.

Breast Cancer Res 2019 01 14;21(1). Epub 2019 Jan 14.

Division of General Internal Medicine, Department of Medicine, Institute of Human Genetics, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, Box 0320, San Francisco, CA, 94143, USA.

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https://breast-cancer-research.biomedcentral.com/articles/10
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http://dx.doi.org/10.1186/s13058-018-1085-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6332913PMC
January 2019

Ancestry and genetic associations with bronchopulmonary dysplasia in preterm infants.

Am J Physiol Lung Cell Mol Physiol 2018 11 16;315(5):L858-L869. Epub 2018 Aug 16.

Department of Pediatrics, University of California , San Francisco, California.

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http://dx.doi.org/10.1152/ajplung.00073.2018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6295513PMC
November 2018

Joint relative risks for estrogen receptor-positive breast cancer from a clinical model, polygenic risk score, and sex hormones.

Breast Cancer Res Treat 2017 Nov 8;166(2):603-612. Epub 2017 Aug 8.

San Francisco Coordinating Center, California Pacific Medical Center Research Institute, Box 0560, 550 16th Street, 2nd Floor, San Francisco, CA, 94159, USA.

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http://dx.doi.org/10.1007/s10549-017-4430-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669824PMC
November 2017

Cis-eQTL-based trans-ethnic meta-analysis reveals novel genes associated with breast cancer risk.

PLoS Genet 2017 Mar 31;13(3):e1006690. Epub 2017 Mar 31.

Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1006690DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5391966PMC
March 2017

A Meta-analysis of Multiple Myeloma Risk Regions in African and European Ancestry Populations Identifies Putatively Functional Loci.

Authors:
Kristin A Rand Chi Song Eric Dean Daniel J Serie Karen Curtin Xin Sheng Donglei Hu Carol Ann Huff Leon Bernal-Mizrachi Michael H Tomasson Sikander Ailawadhi Seema Singhal Karen Pawlish Edward S Peters Cathryn H Bock Alex Stram David J Van Den Berg Christopher K Edlund David V Conti Todd Zimmerman Amie E Hwang Scott Huntsman John Graff Ajay Nooka Yinfei Kong Silvana L Pregja Sonja I Berndt William J Blot John Carpten Graham Casey Lisa Chu W Ryan Diver Victoria L Stevens Michael R Lieber Phyllis J Goodman Anselm J M Hennis Ann W Hsing Jayesh Mehta Rick A Kittles Suzanne Kolb Eric A Klein Cristina Leske Adam B Murphy Barbara Nemesure Christine Neslund-Dudas Sara S Strom Ravi Vij Benjamin A Rybicki Janet L Stanford Lisa B Signorello John S Witte Christine B Ambrosone Parveen Bhatti Esther M John Leslie Bernstein Wei Zheng Andrew F Olshan Jennifer J Hu Regina G Ziegler Sarah J Nyante Elisa V Bandera Brenda M Birmann Sue A Ingles Michael F Press Djordje Atanackovic Martha J Glenn Lisa A Cannon-Albright Brandt Jones Guido Tricot Thomas G Martin Shaji K Kumar Jeffrey L Wolf Sandra L Deming Halverson Nathaniel Rothman Angela R Brooks-Wilson S Vincent Rajkumar Laurence N Kolonel Stephen J Chanock Susan L Slager Richard K Severson Nalini Janakiraman Howard R Terebelo Elizabeth E Brown Anneclaire J De Roos Ann F Mohrbacher Graham A Colditz Graham G Giles John J Spinelli Brian C Chiu Nikhil C Munshi Kenneth C Anderson Joan Levy Jeffrey A Zonder Robert Z Orlowski Sagar Lonial Nicola J Camp Celine M Vachon Elad Ziv Daniel O Stram Dennis J Hazelett Christopher A Haiman Wendy Cozen

Cancer Epidemiol Biomarkers Prev 2016 12 1;25(12):1609-1618. Epub 2016 Sep 1.

Keck School of Medicine of USC and Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.

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http://dx.doi.org/10.1158/1055-9965.EPI-15-1193DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5524541PMC
December 2016

Breast cancer risk prediction using a clinical risk model and polygenic risk score.

Breast Cancer Res Treat 2016 Oct 26;159(3):513-25. Epub 2016 Aug 26.

Division of General Internal Medicine, Department of Medicine, University of California, San Francisco, Box 0320, 1545 Divisadero Street, San Francisco, CA, 94143, USA.

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http://dx.doi.org/10.1007/s10549-016-3953-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5033764PMC
October 2016

Intrahepatic Cholestasis of Pregnancy (ICP) in U.S. Latinas and Chileans: Clinical features, Ancestry Analysis, and Admixture Mapping.

PLoS One 2015 30;10(6):e0131211. Epub 2015 Jun 30.

Department of Obstetrics, Gynecology and Reproductive Sciences, University of California San Francisco, San Francisco, California, United States of America; Department of Radiology, University of California San Francisco, San Francisco, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0131211PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488338PMC
April 2016

Multiple breast cancer risk variants are associated with differential transcript isoform expression in tumors.

Hum Mol Genet 2015 Dec 15;24(25):7421-31. Epub 2015 Oct 15.

Department of Medicine, Institute for Human Genetics, Helen Diller Family Comprehensive Cancer Center and.

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http://dx.doi.org/10.1093/hmg/ddv432DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4664170PMC
December 2015

Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis.

Authors:
Lavinia Paternoster Marie Standl Johannes Waage Hansjörg Baurecht Melanie Hotze David P Strachan John A Curtin Klaus Bønnelykke Chao Tian Atsushi Takahashi Jorge Esparza-Gordillo Alexessander Couto Alves Jacob P Thyssen Herman T den Dekker Manuel A Ferreira Elisabeth Altmaier Patrick Ma Sleiman Feng Li Xiao Juan R Gonzalez Ingo Marenholz Birgit Kalb Maria Pino Yanes Cheng-Jian Xu Lisbeth Carstensen Maria M Groen-Blokhuis Cristina Venturini Craig E Pennell Sheila J Barton Albert M Levin Ivan Curjuric Mariona Bustamante Eskil Kreiner-Møller Gabrielle A Lockett Jonas Bacelis Supinda Bunyavanich Rachel A Myers Anja Matanovic Ashish Kumar Joyce Y Tung Tomomitsu Hirota Michiaki Kubo Wendy L McArdle A J Henderson John P Kemp Jie Zheng George Davey Smith Franz Rüschendorf Anja Bauerfeind Min Ae Lee-Kirsch Andreas Arnold Georg Homuth Carsten O Schmidt Elisabeth Mangold Sven Cichon Thomas Keil Elke Rodríguez Annette Peters Andre Franke Wolfgang Lieb Natalija Novak Regina Fölster-Holst Momoko Horikoshi Juha Pekkanen Sylvain Sebert Lise L Husemoen Niels Grarup Johan C de Jongste Fernando Rivadeneira Albert Hofman Vincent Wv Jaddoe Suzanne Gma Pasmans Niels J Elbert André G Uitterlinden Guy B Marks Philip J Thompson Melanie C Matheson Colin F Robertson Janina S Ried Jin Li Xian Bo Zuo Xiao Dong Zheng Xian Yong Yin Liang Dan Sun Maeve A McAleer Grainne M O'Regan Caoimhe Mr Fahy Linda E Campbell Milan Macek Michael Kurek Donglei Hu Celeste Eng Dirkje S Postma Bjarke Feenstra Frank Geller Jouke Jan Hottenga Christel M Middeldorp Pirro Hysi Veronique Bataille Tim Spector Carla Mt Tiesler Elisabeth Thiering Badri Pahukasahasram James J Yang Medea Imboden Scott Huntsman Natàlia Vilor-Tejedor Caroline L Relton Ronny Myhre Wenche Nystad Adnan Custovic Scott T Weiss Deborah A Meyers Cilla Söderhäll Erik Melén Carole Ober Benjamin A Raby Angela Simpson Bo Jacobsson John W Holloway Hans Bisgaard Jordi Sunyer Nicole M Probst Hensch L Keoki Williams Keith M Godfrey Carol A Wang Dorret I Boomsma Mads Melbye Gerard H Koppelman Deborah Jarvis Wh Irwin McLean Alan D Irvine Xue Jun Zhang Hakon Hakonarson Christian Gieger Esteban G Burchard Nicholas G Martin Liesbeth Duijts Allan Linneberg Marjo-Riitta Jarvelin Markus M Noethen Susanne Lau Norbert Hübner Young-Ae Lee Mayumi Tamari David A Hinds Daniel Glass Sara J Brown Joachim Heinrich David M Evans Stephan Weidinger

Nat Genet 2015 Dec 19;47(12):1449-1456. Epub 2015 Oct 19.

Department of Dermatology, Allergology and Venereology, University Hospital Schleswig-Holstein, Campus Kiel, Kiel, Germany.

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http://dx.doi.org/10.1038/ng.3424DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4753676PMC
December 2015

Adapt-Mix: learning local genetic correlation structure improves summary statistics-based analyses.

Bioinformatics 2015 Jun;31(12):i181-9

Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, Department of Computer Science, University of California Berkeley, Berkeley and Department of Medicine, University of California San Francisco, San Francisco, CA, USA Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, Department of Computer Science, University of California Berkeley, Berkeley and Department of Medicine, University of California San Francisco, San Francisco, CA, USA.

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http://dx.doi.org/10.1093/bioinformatics/btv230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4553832PMC
June 2015

Genetic ancestry and risk of mortality among U.S. Latinas with breast cancer.

Cancer Res 2013 Dec 31;73(24):7243-53. Epub 2013 Oct 31.

Authors' Affiliations: Department of Medicine, Division of General Internal Medicine, Institute for Human Genetics, Helen Diller Family Comprehensive Cancer Center, Center for Aging in Diverse Communities, and Medical Effectiveness Research Center for Diverse Populations, University of California San Francisco, San Francisco; Cancer Prevention Institute of California, Fremont; Division of Epidemiology, Department of Health Research and Policy, and Stanford Cancer Institute, Stanford University School of Medicine, Stanford; and Department of Preventive Medicine, Norris Comprehensive Cancer Center, Keck School of Medicine of University of Southern California, Los Angeles, California.

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http://dx.doi.org/10.1158/0008-5472.CAN-13-2014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3881587PMC
December 2013

A meta-analysis of genome-wide association studies of breast cancer identifies two novel susceptibility loci at 6q14 and 20q11.

Authors:
Afshan Siddiq Fergus J Couch Gary K Chen Sara Lindström Diana Eccles Robert C Millikan Kyriaki Michailidou Daniel O Stram Lars Beckmann Suhn Kyong Rhie Christine B Ambrosone Kristiina Aittomäki Pilar Amiano Carmel Apicella Laura Baglietto Elisa V Bandera Matthias W Beckmann Christine D Berg Leslie Bernstein Carl Blomqvist Hiltrud Brauch Louise Brinton Quang M Bui Julie E Buring Saundra S Buys Daniele Campa Jane E Carpenter Daniel I Chasman Jenny Chang-Claude Constance Chen Françoise Clavel-Chapelon Angela Cox Simon S Cross Kamila Czene Sandra L Deming Robert B Diasio W Ryan Diver Alison M Dunning Lorraine Durcan Arif B Ekici Peter A Fasching Heather Spencer Feigelson Laura Fejerman Jonine D Figueroa Olivia Fletcher Dieter Flesch-Janys Mia M Gaudet Susan M Gerty Jorge L Rodriguez-Gil Graham G Giles Carla H van Gils Andrew K Godwin Nikki Graham Dario Greco Per Hall Susan E Hankinson Arndt Hartmann Rebecca Hein Judith Heinz Robert N Hoover John L Hopper Jennifer J Hu Scott Huntsman Sue A Ingles Astrid Irwanto Claudine Isaacs Kevin B Jacobs Esther M John Christina Justenhoven Rudolf Kaaks Laurence N Kolonel Gerhard A Coetzee Mark Lathrop Loic Le Marchand Adam M Lee I-Min Lee Timothy Lesnick Peter Lichtner Jianjun Liu Eiliv Lund Enes Makalic Nicholas G Martin Catriona A McLean Hanne Meijers-Heijboer Alfons Meindl Penelope Miron Kristine R Monroe Grant W Montgomery Bertram Müller-Myhsok Stefan Nickels Sarah J Nyante Curtis Olswold Kim Overvad Domenico Palli Daniel J Park Julie R Palmer Harsh Pathak Julian Peto Paul Pharoah Nazneen Rahman Fernando Rivadeneira Daniel F Schmidt Rita K Schmutzler Susan Slager Melissa C Southey Kristen N Stevens Hans-Peter Sinn Michael F Press Eric Ross Elio Riboli Paul M Ridker Fredrick R Schumacher Gianluca Severi Isabel Dos Santos Silva Jennifer Stone Malin Sund William J Tapper Michael J Thun Ruth C Travis Clare Turnbull Andre G Uitterlinden Quinten Waisfisz Xianshu Wang Zhaoming Wang Joellen Weaver Rüdiger Schulz-Wendtland Lynne R Wilkens David Van Den Berg Wei Zheng Regina G Ziegler Elad Ziv Heli Nevanlinna Douglas F Easton David J Hunter Brian E Henderson Stephen J Chanock Montserrat Garcia-Closas Peter Kraft Christopher A Haiman Celine M Vachon

Hum Mol Genet 2012 Dec 13;21(24):5373-84. Epub 2012 Sep 13.

Department of Epidemiology and Biostatistics, School of Public Health, Imperial College London, London, UK.

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https://academic.oup.com/hmg/article/21/24/5373/665552
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http://dx.doi.org/10.1093/hmg/dds381DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3510753PMC
December 2012

Genetic variation in Native Americans, inferred from Latino SNP and resequencing data.

Mol Biol Evol 2011 Aug 2;28(8):2231-7. Epub 2011 Mar 2.

Institute for Human Genetics and Department of Epidemiology and Biostatistics, University of California San Francisco, CA, USA.

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http://dx.doi.org/10.1093/molbev/msr049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3144384PMC
August 2011

Meta-analysis of genome-wide association studies of asthma in ethnically diverse North American populations.

Nat Genet 2011 Jul 31;43(9):887-92. Epub 2011 Jul 31.

Department of Human Genetics, University of Chicago, Chicago, Illinois, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3445408PMC
http://dx.doi.org/10.1038/ng.888DOI Listing
July 2011

European ancestry is positively associated with breast cancer risk in Mexican women.

Cancer Epidemiol Biomarkers Prev 2010 Apr 23;19(4):1074-82. Epub 2010 Mar 23.

Division of General Internal Medicine, Department of Medicine, Institute for Human Genetics, University of California, San Francisco, California, USA.

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http://cebp.aacrjournals.org/cgi/doi/10.1158/1055-9965.EPI-0
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http://dx.doi.org/10.1158/1055-9965.EPI-09-1193DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852491PMC
April 2010

An admixture scan in 1,484 African American women with breast cancer.

Cancer Epidemiol Biomarkers Prev 2009 Nov 20;18(11):3110-7. Epub 2009 Oct 20.

Division of General Internal Medicine, Department of Medicine, Institute for Human Genetics and Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, California 94143, USA.

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http://dx.doi.org/10.1158/1055-9965.EPI-09-0464DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2783219PMC
November 2009

Genetic ancestry and risk of breast cancer among U.S. Latinas.

Cancer Res 2008 Dec;68(23):9723-8

Division of General Internal Medicine and Lung Biology Center, Department of Medicine, University of California, San Francisco, CA 94143-1732, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-08-2039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2674787PMC
December 2008