Publications by authors named "Sarah K Hilton"

10Publications

Deep Mutational Scanning of SARS-CoV-2 Receptor Binding Domain Reveals Constraints on Folding and ACE2 Binding.

Cell 2020 09 11;182(5):1295-1310.e20. Epub 2020 Aug 11.

Basic Sciences Division and Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, Seattle, WA 98109, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2020.08.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7418704PMC
September 2020

Hemiptera phylogenomic resources: Tree-based orthology prediction and conserved exon identification.

Mol Ecol Resour 2020 May 1. Epub 2020 May 1.

Computational Biology Institute, George Washington University, Washington, DC, USA.

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http://dx.doi.org/10.1111/1755-0998.13180DOI Listing
May 2020

Modeling site-specific amino-acid preferences deepens phylogenetic estimates of viral sequence divergence.

Virus Evol 2018 Jul 6;4(2):vey033. Epub 2018 Nov 6.

Basic Sciences and Computational Biology Program, Fred Hutchinson Cancer Research Center.

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https://academic.oup.com/ve/article/doi/10.1093/ve/vey033/51
Publisher Site
http://dx.doi.org/10.1093/ve/vey033DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6220371PMC
July 2018

Mapping mutational effects along the evolutionary landscape of HIV envelope.

Elife 2018 03 28;7. Epub 2018 Mar 28.

Basic Sciences Division and Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, United States.

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http://dx.doi.org/10.7554/eLife.34420DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5910023PMC
March 2018

phydms: software for phylogenetic analyses informed by deep mutational scanning.

PeerJ 2017 31;5:e3657. Epub 2017 Jul 31.

Division of Basic Sciences and Computational Biology Program, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

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http://dx.doi.org/10.7717/peerj.3657DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5541924PMC
July 2017

Retrotransposons Are the Major Contributors to the Expansion of the Muller F Element.

Authors:
Wilson Leung Christopher D Shaffer Elizabeth J Chen Thomas J Quisenberry Kevin Ko John M Braverman Thomas C Giarla Nathan T Mortimer Laura K Reed Sheryl T Smith Srebrenka Robic Shannon R McCartha Danielle R Perry Lindsay M Prescod Zenyth A Sheppard Ken J Saville Allison McClish Emily A Morlock Victoria R Sochor Brittney Stanton Isaac C Veysey-White Dennis Revie Luis A Jimenez Jennifer J Palomino Melissa D Patao Shane M Patao Edward T Himelblau Jaclyn D Campbell Alexandra L Hertz Maddison F McEvilly Allison R Wagner James Youngblom Baljit Bedi Jeffery Bettincourt Erin Duso Maiye Her William Hilton Samantha House Masud Karimi Kevin Kumimoto Rebekah Lee Darryl Lopez George Odisho Ricky Prasad Holly Lyn Robbins Tanveer Sandhu Tracy Selfridge Kara Tsukashima Hani Yosif Nighat P Kokan Latia Britt Alycia Zoellner Eric P Spana Ben T Chlebina Insun Chong Harrison Friedman Danny A Mammo Chun L Ng Vinayak S Nikam Nicholas U Schwartz Thomas Q Xu Martin G Burg Spencer M Batten Lindsay M Corbeill Erica Enoch Jesse J Ensign Mary E Franks Breanna Haiker Judith A Ingles Lyndsay D Kirkland Joshua M Lorenz-Guertin Jordan Matthews Cody M Mittig Nicholaus Monsma Katherine J Olson Guillermo Perez-Aragon Alen Ramic Jordan R Ramirez Christopher Scheiber Patrick A Schneider Devon E Schultz Matthew Simon Eric Spencer Adam C Wernette Maxine E Wykle Elizabeth Zavala-Arellano Mitchell J McDonald Kristine Ostby Peter Wendland Justin R DiAngelo Alexis M Ceasrine Amanda H Cox James E B Docherty Robert M Gingras Stephanie M Grieb Michael J Pavia Casey L Personius Grzegorz L Polak Dale L Beach Heaven L Cerritos Edward A Horansky Karim A Sharif Ryan Moran Susan Parrish Kirsten Bickford Jennifer Bland Juliana Broussard Kerry Campbell Katelynn E Deibel Richard Forka Monika C Lemke Marlee B Nelson Catherine O'Keeffe S Mariel Ramey Luke Schmidt Paola Villegas Christopher J Jones Stephanie L Christ Sami Mamari Adam S Rinaldi Ghazal Stity Amy T Hark Mark Scheuerman S Catherine Silver Key Briana D McRae Adam S Haberman Sam Asinof Harriette Carrington Kelly Drumm Terrance Embry Richard McGuire Drew Miller-Foreman Stella Rosen Nadia Safa Darrin Schultz Matt Segal Yakov Shevin Petros Svoronos Tam Vuong Gary Skuse Don W Paetkau Rachael K Bridgman Charlotte M Brown Alicia R Carroll Francesca M Gifford Julie Beth Gillespie Susan E Herman Krystal L Holtcamp Misha A Host Gabrielle Hussey Danielle M Kramer Joan Q Lawrence Madeline M Martin Ellen N Niemiec Ashleigh P O'Reilly Olivia A Pahl Guadalupe Quintana Elizabeth A S Rettie Torie L Richardson Arianne E Rodriguez Mona O Rodriguez Laura Schiraldi Joanna J Smith Kelsey F Sugrue Lindsey J Suriano Kaitlyn E Takach Arielle M Vasquez Ximena Velez Elizabeth J Villafuerte Laura T Vives Victoria R Zellmer Jeanette Hauke Charles R Hauser Karolyn Barker Laurie Cannon Perouza Parsamian Samantha Parsons Zachariah Wichman Christopher W Bazinet Diana E Johnson Abubakarr Bangura Jordan A Black Victoria Chevee Sarah A Einsteen Sarah K Hilton Max Kollmer Rahul Nadendla Joyce Stamm Antoinette E Fafara-Thompson Amber M Gygi Emmy E Ogawa Matt Van Camp Zuzana Kocsisova Judith L Leatherman Cassie M Modahl Michael R Rubin Susana S Apiz-Saab Suzette M Arias-Mejias Carlos F Carrion-Ortiz Patricia N Claudio-Vazquez Debbie M Espada-Green Marium Feliciano-Camacho Karina M Gonzalez-Bonilla Mariela Taboas-Arroyo Dorianmarie Vargas-Franco Raquel Montañez-Gonzalez Joseph Perez-Otero Myrielis Rivera-Burgos Francisco J Rivera-Rosario Heather L Eisler Jackie Alexander Samatha K Begley Deana Gabbard Robert J Allen Wint Yan Aung William D Barshop Amanda Boozalis Vanessa P Chu Jeremy S Davis Ryan N Duggal Robert Franklin Katherine Gavinski Heran Gebreyesus Henry Z Gong Rachel A Greenstein Averill D Guo Casey Hanson Kaitlin E Homa Simon C Hsu Yi Huang Lucy Huo Sarah Jacobs Sasha Jia Kyle L Jung Sarah Wai-Chee Kong Matthew R Kroll Brandon M Lee Paul F Lee Kevin M Levine Amy S Li Chengyu Liu Max Mian Liu Adam P Lousararian Peter B Lowery Allyson P Mallya Joseph E Marcus Patrick C Ng Hien P Nguyen Ruchik Patel Hashini Precht Suchita Rastogi Jonathan M Sarezky Adam Schefkind Michael B Schultz Delia Shen Tara Skorupa Nicholas C Spies Gabriel Stancu Hiu Man Vivian Tsang Alice L Turski Rohit Venkat Leah E Waldman Kaidi Wang Tracy Wang Jeffrey W Wei Dennis Y Wu David D Xiong Jack Yu Karen Zhou Gerard P McNeil Robert W Fernandez Patrick Gomez Menzies Tingting Gu Jeremy Buhler Elaine R Mardis Sarah C R Elgin

G3 (Bethesda) 2017 08 7;7(8):2439-2460. Epub 2017 Aug 7.

Department of Biology, Washington University in St. Louis, St. Louis, MO 63130.

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http://g3journal.org/lookup/doi/10.1534/g3.117.040907
Publisher Site
http://dx.doi.org/10.1534/g3.117.040907DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5555453PMC
August 2017