Sara Vieira-Silva

Sara Vieira-Silva

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Sara Vieira-Silva

Sara Vieira-Silva

Publications by authors named "Sara Vieira-Silva"

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37Publications

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Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses.

Nat Microbiol 2019 Nov 17;4(11):1826-1831. Epub 2019 Jun 17.

Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1038/s41564-019-0483-9DOI Listing
November 2019

Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study.

Nat Med 2019 07 1;25(7):1096-1103. Epub 2019 Jul 1.

Metabolism and Nutrition Research Group, Louvain Drug Research Institute, WELBIO, Walloon Excellence in Life Sciences and BIOtechnology, UCLouvain, Université catholique de Louvain, Brussels, Belgium.

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http://dx.doi.org/10.1038/s41591-019-0495-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699990PMC
July 2019

The neuroactive potential of the human gut microbiota in quality of life and depression.

Nat Microbiol 2019 04 4;4(4):623-632. Epub 2019 Feb 4.

Department of Microbiology and Immunology, Rega Institute for Medical Research, KU Leuven-University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1038/s41564-018-0337-xDOI Listing
April 2019

The human microbiome in health and disease: hype or hope.

Acta Clin Belg 2019 Apr 27;74(2):53-64. Epub 2019 Feb 27.

a Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology , Rega Institute, KU Leuven , Leuven , Belgium.

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http://dx.doi.org/10.1080/17843286.2019.1583782DOI Listing
April 2019

Richness and ecosystem development across faecal snapshots of the gut microbiota.

Nat Microbiol 2018 05;3(5):526-528

Department of Microbiology and Immunology, Rega Institute, KU Leuven - University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1038/s41564-018-0143-5DOI Listing
May 2018

Prebiotic Wheat Bran Fractions Induce Specific Microbiota Changes.

Front Microbiol 2018 24;9:31. Epub 2018 Jan 24.

Laboratory of Molecular Bacteriology, Department of Microbiology and Immunology, Rega Institute, KU Leuven, Leuven, Belgium.

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http://dx.doi.org/10.3389/fmicb.2018.00031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5787670PMC
January 2018

Prebiotic inulin-type fructans induce specific changes in the human gut microbiota.

Gut 2017 11 17;66(11):1968-1974. Epub 2017 Feb 17.

Department of Microbiology and Immunology, Rega Institute, KU Leuven - University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1136/gutjnl-2016-313271DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5739857PMC
November 2017

Quantitative microbiome profiling links gut community variation to microbial load.

Nature 2017 11 15;551(7681):507-511. Epub 2017 Nov 15.

KU Leuven - University of Leuven, Department of Microbiology and Immunology, Rega Institute, Herestraat 49, B-3000 Leuven, Belgium.

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http://dx.doi.org/10.1038/nature24460DOI Listing
November 2017

Water activity does not shape the microbiota in the human colon.

Gut 2017 10 6;66(10):1865-1866. Epub 2017 Jan 6.

Department of Microbiology and Immunology, KU Leuven-University of Leuven, Rega Institute, Leuven, Belgium.

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http://dx.doi.org/10.1136/gutjnl-2016-313530DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5595100PMC
October 2017

Nlrp6- and ASC-Dependent Inflammasomes Do Not Shape the Commensal Gut Microbiota Composition.

Immunity 2017 08 8;47(2):339-348.e4. Epub 2017 Aug 8.

Department of Internal Medicine, Ghent University, Ghent, Belgium; VIB-UGent Center for Inflammation Research, VIB, Ghent, Belgium. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2017.07.011DOI Listing
August 2017

Primary sclerosing cholangitis is characterised by intestinal dysbiosis independent from IBD.

Gut 2016 10 20;65(10):1681-9. Epub 2016 May 20.

Department of Microbiology and Immunology, Laboratory of Molecular Bacteriology, KU Leuven-University of Leuven, Rega Institute for Medical Research, Leuven, Belgium Center for the Biology of Disease, VIB, Leuven, Belgium.

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http://dx.doi.org/10.1136/gutjnl-2015-311004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036217PMC
October 2016

Heritable components of the human fecal microbiome are associated with visceral fat.

Genome Biol 2016 Sep 26;17(1):189. Epub 2016 Sep 26.

Department of Twin Research & Genetic Epidemiology, King's College London, St Thomas' Hospital, 3rd Floor, South Wing, Block D, London, SE1 7EH, UK.

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http://dx.doi.org/10.1186/s13059-016-1052-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5036307PMC
September 2016

Meta-omics in Inflammatory Bowel Disease Research: Applications, Challenges, and Guidelines.

J Crohns Colitis 2016 Jun 22;10(6):735-46. Epub 2016 Jan 22.

KU Leuven, Department of Microbiology and Immunology, Rega Institute, Leuven, Belgium VIB, Center for the Biology of Disease, Leuven, Belgium Microbiology Unit, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel, Brussels, Belgium.

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http://dx.doi.org/10.1093/ecco-jcc/jjw024DOI Listing
June 2016

Species-function relationships shape ecological properties of the human gut microbiome.

Nat Microbiol 2016 06 13;1(8):16088. Epub 2016 Jun 13.

Department of Microbiology and Immunology, KU Leuven-University of Leuven, Rega Institute, Herestraat 49, B-3000 Leuven, Belgium.

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http://dx.doi.org/10.1038/nmicrobiol.2016.88DOI Listing
June 2016

Towards biome-specific analysis of meta-omics data.

ISME J 2016 May 1;10(5):1025-8. Epub 2015 Dec 1.

Microbiology Unit, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel, Brussels, Belgium.

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http://dx.doi.org/10.1038/ismej.2015.188DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5029225PMC
May 2016

Population-level analysis of gut microbiome variation.

Science 2016 Apr 28;352(6285):560-4. Epub 2016 Apr 28.

KU Leuven-University of Leuven, Department of Microbiology and Immunology, Leuven, Belgium. VIB, Center for the Biology of Disease, Leuven, Belgium. Vrije Universiteit Brussel, Faculty of Sciences and Bioengineering Sciences, Microbiology Unit, Brussels, Belgium.

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http://dx.doi.org/10.1126/science.aad3503DOI Listing
April 2016

Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates.

Gut 2016 Jan 11;65(1):57-62. Epub 2015 Jun 11.

Department of Microbiology and Immunology, KU Leuven, Rega Institute, Leuven, Belgium VIB, Center for the Biology of Disease, Leuven, Belgium Faculty of Sciences and Bioengineering Sciences, Microbiology Unit, Vrije Universiteit Brussel, Brussels, Belgium.

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http://dx.doi.org/10.1136/gutjnl-2015-309618DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4717365PMC
January 2016

T and NK Cell Phenotypic Abnormalities in Systemic Sclerosis: a Cohort Study and a Comprehensive Literature Review.

Clin Rev Allergy Immunol 2015 Dec;49(3):347-69

Laboratory of Cytometry, Department of Haematology, Hospital de Santo António (HSA), Centro Hospitalar do Porto (CHP), Porto, Portugal.

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http://dx.doi.org/10.1007/s12016-015-8505-8DOI Listing
December 2015

How informative is the mouse for human gut microbiota research?

Dis Model Mech 2015 Jan;8(1):1-16

KU Leuven, Department of Microbiology and Immunology, Rega Institute, Herestraat 49, B-3000 Leuven, Belgium. VIB, Center for the Biology of Disease, Herestraat 49, B-3000 Leuven, Belgium. Microbiology Unit, Faculty of Sciences and Bioengineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussels, Belgium.

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http://dx.doi.org/10.1242/dmm.017400DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4283646PMC
January 2015

A20 controls intestinal homeostasis through cell-specific activities.

Nat Commun 2014 Sep 30;5:5103. Epub 2014 Sep 30.

1] Unit of Molecular Signal Transduction in Inflammation, Inflammation Research Center, VIB, Technologiepark 927, B-9052 Ghent, Belgium [2] Department of Biomedical Molecular Biology, Ghent University, Technologiepark 927, B-9052 Ghent, Belgium [3].

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http://dx.doi.org/10.1038/ncomms6103DOI Listing
September 2014

Immune subversion and quorum-sensing shape the variation in infectious dose among bacterial pathogens.

PLoS Pathog 2012 Feb 2;8(2):e1002503. Epub 2012 Feb 2.

Centro de Biologia Ambiental and Departamento de Biologia Vegetal, Faculdade de Ciências da Universidade de Lisboa, Lisboa, Portugal.

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https://dx.plos.org/10.1371/journal.ppat.1002503
Publisher Site
http://dx.doi.org/10.1371/journal.ppat.1002503DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271079PMC
February 2012

Investment in rapid growth shapes the evolutionary rates of essential proteins.

Proc Natl Acad Sci U S A 2011 Dec 30;108(50):20030-5. Epub 2011 Nov 30.

Département Génomes et Génétique, Institut Pasteur, F-75015 Paris, France.

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http://dx.doi.org/10.1073/pnas.1110972108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3250144PMC
December 2011

Association of hemicellulose- and pectin-modifying gene expression with Eucalyptus globulus secondary growth.

Plant Physiol Biochem 2011 Aug 3;49(8):873-81. Epub 2011 Mar 3.

Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa, Av. da República, EAN, 2780-157 Oeiras, Portugal.

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http://dx.doi.org/10.1016/j.plaphy.2011.02.020DOI Listing
August 2011

No evidence for elemental-based streamlining of prokaryotic genomes.

Trends Ecol Evol 2010 Jun 8;25(6):319-20; author reply 320-1. Epub 2010 Apr 8.

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http://dx.doi.org/10.1016/j.tree.2010.03.001DOI Listing
June 2010

The systemic imprint of growth and its uses in ecological (meta)genomics.

PLoS Genet 2010 Jan 15;6(1):e1000808. Epub 2010 Jan 15.

Microbial Evolutionary Genomics, Institut Pasteur, CNRS, URA2171, Paris, France.

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http://dx.doi.org/10.1371/journal.pgen.1000808DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2797632PMC
January 2010

An assessment of the impacts of molecular oxygen on the evolution of proteomes.

Mol Biol Evol 2008 Sep 25;25(9):1931-42. Epub 2008 Jun 25.

Atelier de BioInformatique, Université Pierre et Marie Curie-Paris 6, Paris, France.

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http://dx.doi.org/10.1093/molbev/msn142DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2515869PMC
September 2008