Publications by authors named "Sara Brin Rosenthal"

11Publications

A Network of SLC and ABC Transporter and DME Genes Involved in Remote Sensing and Signaling in the Gut-Liver-Kidney Axis.

Sci Rep 2019 08 15;9(1):11879. Epub 2019 Aug 15.

Departments of Pediatrics, University of California at San Diego, La Jolla, CA, 92093-0693, USA.

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http://dx.doi.org/10.1038/s41598-019-47798-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6695406PMC
August 2019

Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks.

PLoS Comput Biol 2019 07 25;15(7):e1007007. Epub 2019 Jul 25.

Data Science Hub, San Diego Supercomputer Center, UC San Diego, La Jolla, California, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1007007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6657818PMC
July 2019

Integrating Gene and Protein Expression Reveals Perturbed Functional Networks in Alzheimer's Disease.

Cell Rep 2019 07;28(4):1103-1116.e4

Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA; Veterans Affairs San Diego Healthcare System, San Diego, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.06.073DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7503200PMC
July 2019

A Multiscale Map of the Stem Cell State in Pancreatic Adenocarcinoma.

Cell 2019 04 4;177(3):572-586.e22. Epub 2019 Apr 4.

Department of Pharmacology, University of California, San Diego School of Medicine, La Jolla, CA, USA; Sanford Consortium for Regenerative Medicine, La Jolla, CA, USA; Moores Cancer Center, University of California, San Diego School of Medicine, La Jolla, CA, USA; Department of Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00928674193027
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http://dx.doi.org/10.1016/j.cell.2019.03.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711371PMC
April 2019

Revisiting Antipsychotic Drug Actions Through Gene Networks Associated With Schizophrenia.

Am J Psychiatry 2018 07 2;175(7):674-682. Epub 2018 Mar 2.

From the Center for Multimodal Imaging and Genetics, the Department of Radiology, the Center for Computational Biology and Bioinformatics, and the Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, Calif.; the Department of Radiation Sciences, Umeå University, Umeå, Sweden; and NORMENT, KG Jebsen Center for Psychosis Research, Institute of Clinical Medicine, University of Oslo and Division of Mental Health and Addiction, Oslo University Hospital, Oslo.

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http://dx.doi.org/10.1176/appi.ajp.2017.17040410DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6028303PMC
July 2018

Interactive network visualization in Jupyter notebooks: visJS2jupyter.

Bioinformatics 2018 01;34(1):126-128

Department of Medicine, Center for Computational Biology and Bioinformatics, University of California San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1093/bioinformatics/btx581DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6075087PMC
January 2018

The evolution of distributed sensing and collective computation in animal populations.

Elife 2015 Dec 10;4:e10955. Epub 2015 Dec 10.

Department of Collective Behaviour, Max Planck Institute for Ornithology, Konstanz, Germany.

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http://dx.doi.org/10.7554/eLife.10955DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4755780PMC
December 2015

Revealing the hidden networks of interaction in mobile animal groups allows prediction of complex behavioral contagion.

Proc Natl Acad Sci U S A 2015 Apr 30;112(15):4690-5. Epub 2015 Mar 30.

Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544; Department of Collective Behaviour, Max Planck Institute for Ornithology, D-78547 Konstanz, Germany; and Chair of Biodiversity and Collective Behavior, Department of Biology, University of Konstanz, D-78547 Konstanz, Germany

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http://dx.doi.org/10.1073/pnas.1420068112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4403201PMC
April 2015