Sanzhen Liu

Sanzhen Liu

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Sanzhen Liu

Sanzhen Liu

Publications by authors named "Sanzhen Liu"

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commandeers the host rate-limiting step in ABA biosynthesis for disease susceptibility.

Proc Natl Acad Sci U S A 2019 Oct 1;116(42):20938-20946. Epub 2019 Oct 1.

Department of Plant Pathology, University of Florida, Gainesville, FL 32611;

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http://dx.doi.org/10.1073/pnas.1911660116DOI Listing
October 2019

Effector gene reshuffling involves dispensable mini-chromosomes in the wheat blast fungus.

PLoS Genet 2019 Sep 12;15(9):e1008272. Epub 2019 Sep 12.

Department of Plant Pathology, Kansas State University, Manhattan, KS, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1008272DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6741851PMC
September 2019

Cellular Dynamics and Genomic Identity of Centromeres in Cereal Blast Fungus.

MBio 2019 Jul 30;10(4). Epub 2019 Jul 30.

Temasek Life Sciences Laboratory, and the Department of Biological Sciences, National University of Singapore, Singapore

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http://dx.doi.org/10.1128/mBio.01581-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6667624PMC
July 2019

Maize glossy6 is involved in cuticular wax deposition and drought tolerance.

J Exp Bot 2019 Jun;70(12):3089-3099

Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, P. R. China.

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http://dx.doi.org/10.1093/jxb/erz131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6598097PMC
June 2019

TILL-D: An TILLING Resource for Wheat Improvement.

Front Plant Sci 2018 14;9:1665. Epub 2018 Nov 14.

Plant Pathology Department, Kansas State University, Manhattan, KS, United States.

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http://dx.doi.org/10.3389/fpls.2018.01665DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6246738PMC
November 2018

JRmGRN: joint reconstruction of multiple gene regulatory networks with common hub genes using data from multiple tissues or conditions.

Bioinformatics 2018 10;34(20):3470-3478

School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI, USA.

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http://dx.doi.org/10.1093/bioinformatics/bty354DOI Listing
October 2018

FERONIA Receptor Kinase Contributes to Plant Immunity by Suppressing Jasmonic Acid Signaling in Arabidopsis thaliana.

Curr Biol 2018 10 27;28(20):3316-3324.e6. Epub 2018 Sep 27.

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S09609822183104
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http://dx.doi.org/10.1016/j.cub.2018.07.078DOI Listing
October 2018

Genetic mapping of a major gene in triticale conferring resistance to bacterial leaf streak.

Theor Appl Genet 2018 Mar 7;131(3):649-658. Epub 2017 Dec 7.

Department of Plant Pathology, North Dakota State University, Fargo, ND, USA.

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http://dx.doi.org/10.1007/s00122-017-3026-xDOI Listing
March 2018

Identification of Brassinosteroid Target Genes by Chromatin Immunoprecipitation Followed by High-Throughput Sequencing (ChIP-seq) and RNA-Sequencing.

Methods Mol Biol 2017 ;1564:63-79

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011-3650, USA.

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http://dx.doi.org/10.1007/978-1-4939-6813-8_7DOI Listing
February 2018

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci.

Nucleic Acids Res 2017 Dec;45(21):e178

Department of Agronomy, Iowa State University, Ames, IA 50011-3650, USA.

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http://dx.doi.org/10.1093/nar/gkx853DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5716196PMC
December 2017

Homologues of CsLOB1 in citrus function as disease susceptibility genes in citrus canker.

Mol Plant Pathol 2017 08 11;18(6):798-810. Epub 2016 Aug 11.

Department of Plant Pathology, University of Florida, Gainesville, FL, USA 32611.

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http://dx.doi.org/10.1111/mpp.12441DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6638217PMC
August 2017

Genes Expressed Differentially in Hessian Fly Larvae Feeding in Resistant and Susceptible Plants.

Int J Mol Sci 2016 Aug 12;17(8). Epub 2016 Aug 12.

Department of Entomology, Kansas State University, Manhattan, KS 66506, USA.

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http://dx.doi.org/10.3390/ijms17081324DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000721PMC
August 2016

Gene targeting by the TAL effector PthXo2 reveals cryptic resistance gene for bacterial blight of rice.

Plant J 2015 May;82(4):632-43

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011, USA.

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http://dx.doi.org/10.1111/tpj.12838DOI Listing
May 2015

The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase.

Plant J 2015 Feb 9;81(3):493-504. Epub 2015 Jan 9.

Department of Agronomy, Iowa State University, 2035 Roy J. Carver Co-Lab, Ames, IA, 50011-3650, USA; College of Agronomy, Northwest Agriculture and Forestry University, #3, Taicheng road, Yangling, Shaanxi, 712100, China.

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http://dx.doi.org/10.1111/tpj.12745DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4329605PMC
February 2015

Roothairless5, which functions in maize (Zea mays L.) root hair initiation and elongation encodes a monocot-specific NADPH oxidase.

Plant J 2014 Sep 15;79(5):729-40. Epub 2014 Jul 15.

Institute of Crop Science and Resource Conservation, Crop Functional Genomics, University of Bonn, 53113, Bonn, Germany.

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http://doi.wiley.com/10.1111/tpj.12578
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http://dx.doi.org/10.1111/tpj.12578DOI Listing
September 2014

The Aux/IAA gene rum1 involved in seminal and lateral root formation controls vascular patterning in maize (Zea mays L.) primary roots.

J Exp Bot 2014 Sep 13;65(17):4919-30. Epub 2014 Jun 13.

INRES, Institute of Crop Science and Resource Conservation, Crop Functional Genomics, University of Bonn, Friedrich-Ebert-Allee 144, 53113 Bonn, Germany

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http://dx.doi.org/10.1093/jxb/eru249DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144770PMC
September 2014

Histone lysine methyltransferase SDG8 is involved in brassinosteroid-regulated gene expression in Arabidopsis thaliana.

Mol Plant 2014 Aug 16;7(8):1303-1315. Epub 2014 May 16.

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011, USA. Electronic address:

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http://dx.doi.org/10.1093/mp/ssu056DOI Listing
August 2014

The maize glossy13 gene, cloned via BSR-Seq and Seq-walking encodes a putative ABC transporter required for the normal accumulation of epicuticular waxes.

PLoS One 2013 6;8(12):e82333. Epub 2013 Dec 6.

College of Agronomy, Northwest Agriculture & Forestry University, Yangling, Shaanxi, China ; Department of Agronomy, Iowa State University, Ames, Iowa, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0082333PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855708PMC
July 2014

The maize brown midrib2 (bm2) gene encodes a methylenetetrahydrofolate reductase that contributes to lignin accumulation.

Plant J 2014 Feb 10;77(3):380-92. Epub 2014 Jan 10.

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011, USA.

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http://dx.doi.org/10.1111/tpj.12394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4282534PMC
February 2014

Mendelian and non-Mendelian regulation of gene expression in maize.

PLoS Genet 2013 17;9(1):e1003202. Epub 2013 Jan 17.

Department of Agronomy and Plant Genetics, University of Minnesota, Saint Paul, Minnesota, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1003202DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3547793PMC
May 2013

Changes in genome content generated via segregation of non-allelic homologs.

Plant J 2012 Nov 30;72(3):390-9. Epub 2012 Aug 30.

Department of Agronomy, 2035 Roy J. Carver Co-Lab, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1111/j.1365-313X.2012.05087.xDOI Listing
November 2012

Gene mapping via bulked segregant RNA-Seq (BSR-Seq).

PLoS One 2012 7;7(5):e36406. Epub 2012 May 7.

Department of Agronomy, Iowa State University, Ames, Iowa, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0036406PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3346754PMC
September 2012

Heritable epigenetic variation among maize inbreds.

PLoS Genet 2011 Nov 17;7(11):e1002372. Epub 2011 Nov 17.

Microbial and Plant Genomics Institute, Department of Plant Biology, University of Minnesota, Saint Paul, Minnesota, USA.

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http://dx.doi.org/10.1371/journal.pgen.1002372DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3219600PMC
November 2011

DLA-based strategies for cloning insertion mutants: cloning the gl4 locus of maize using Mu transposon tagged alleles.

Genetics 2009 Dec 5;183(4):1215-25. Epub 2009 Oct 5.

Interdepartmental Genetics Graduate Program, Department of Genetics, Iowa State University, Ames, Iowa 50011-3650, USA.

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http://dx.doi.org/10.1534/genetics.109.108936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2787415PMC
December 2009

The B73 maize genome: complexity, diversity, and dynamics.

Authors:
Patrick S Schnable Doreen Ware Robert S Fulton Joshua C Stein Fusheng Wei Shiran Pasternak Chengzhi Liang Jianwei Zhang Lucinda Fulton Tina A Graves Patrick Minx Amy Denise Reily Laura Courtney Scott S Kruchowski Chad Tomlinson Cindy Strong Kim Delehaunty Catrina Fronick Bill Courtney Susan M Rock Eddie Belter Feiyu Du Kyung Kim Rachel M Abbott Marc Cotton Andy Levy Pamela Marchetto Kerri Ochoa Stephanie M Jackson Barbara Gillam Weizu Chen Le Yan Jamey Higginbotham Marco Cardenas Jason Waligorski Elizabeth Applebaum Lindsey Phelps Jason Falcone Krishna Kanchi Thynn Thane Adam Scimone Nay Thane Jessica Henke Tom Wang Jessica Ruppert Neha Shah Kelsi Rotter Jennifer Hodges Elizabeth Ingenthron Matt Cordes Sara Kohlberg Jennifer Sgro Brandon Delgado Kelly Mead Asif Chinwalla Shawn Leonard Kevin Crouse Kristi Collura Dave Kudrna Jennifer Currie Ruifeng He Angelina Angelova Shanmugam Rajasekar Teri Mueller Rene Lomeli Gabriel Scara Ara Ko Krista Delaney Marina Wissotski Georgina Lopez David Campos Michele Braidotti Elizabeth Ashley Wolfgang Golser HyeRan Kim Seunghee Lee Jinke Lin Zeljko Dujmic Woojin Kim Jayson Talag Andrea Zuccolo Chuanzhu Fan Aswathy Sebastian Melissa Kramer Lori Spiegel Lidia Nascimento Theresa Zutavern Beth Miller Claude Ambroise Stephanie Muller Will Spooner Apurva Narechania Liya Ren Sharon Wei Sunita Kumari Ben Faga Michael J Levy Linda McMahan Peter Van Buren Matthew W Vaughn Kai Ying Cheng-Ting Yeh Scott J Emrich Yi Jia Ananth Kalyanaraman An-Ping Hsia W Brad Barbazuk Regina S Baucom Thomas P Brutnell Nicholas C Carpita Cristian Chaparro Jer-Ming Chia Jean-Marc Deragon James C Estill Yan Fu Jeffrey A Jeddeloh Yujun Han Hyeran Lee Pinghua Li Damon R Lisch Sanzhen Liu Zhijie Liu Dawn Holligan Nagel Maureen C McCann Phillip SanMiguel Alan M Myers Dan Nettleton John Nguyen Bryan W Penning Lalit Ponnala Kevin L Schneider David C Schwartz Anupma Sharma Carol Soderlund Nathan M Springer Qi Sun Hao Wang Michael Waterman Richard Westerman Thomas K Wolfgruber Lixing Yang Yeisoo Yu Lifang Zhang Shiguo Zhou Qihui Zhu Jeffrey L Bennetzen R Kelly Dawe Jiming Jiang Ning Jiang Gernot G Presting Susan R Wessler Srinivas Aluru Robert A Martienssen Sandra W Clifton W Richard McCombie Rod A Wing Richard K Wilson

Science 2009 Nov;326(5956):1112-5

Center for Plant Genomics, Iowa State University, Ames, IA 50011, USA.

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http://www.dawelab.org/wp-content/uploads/2011/03/schnable-2
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http://www.sciencemag.org/cgi/doi/10.1126/science.1178534
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http://dx.doi.org/10.1126/science.1178534DOI Listing
November 2009

Study on the dynamic behavior of a DNA microarray.

J Nanosci Nanotechnol 2005 Aug;5(8):1249-55

State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Science, Fudan University, Shanghai 200433, P R. China.

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http://dx.doi.org/10.1166/jnn.2005.218DOI Listing
August 2005

Analysis of the factors affecting the accuracy of detection for single base alterations by oligonucleotide microarray.

Exp Mol Med 2005 Apr;37(2):71-7

State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Science, Fudan University, Shanghai 200433, P.R. China.

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http://dx.doi.org/10.1038/emm.2005.10DOI Listing
April 2005

Comparison of hybridization behavior between double and single strands of targets and the application of asymmetric PCR targets in cDNA microarray.

J Biochem Mol Biol 2004 Jul;37(4):439-44

State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Science, Fudan University, Shanghai 200433, P.R. China.

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July 2004

Systematic comparison of the fidelity of aRNA, mRNA and T-RNA on gene expression profiling using cDNA microarray.

J Biotechnol 2004 Jan;107(1):19-28

State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Science, Fudan University, Shanghai 200433, PR China.

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http://dx.doi.org/10.1016/j.jbiotec.2003.09.008DOI Listing
January 2004