Publications by authors named "Sanne Nygaard"

18Publications

Reciprocal genomic evolution in the ant-fungus agricultural symbiosis.

Nat Commun 2016 07 20;7:12233. Epub 2016 Jul 20.

Centre for Social Evolution, Department of Biology, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark.

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http://dx.doi.org/10.1038/ncomms12233DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4961791PMC
July 2016

DivA: detection of non-homologous and very divergent regions in protein sequence alignments.

BMC Res Notes 2014 Nov 18;7:806. Epub 2014 Nov 18.

Centre for GeoGenetics, University of Copenhagen, Copenhagen, Denmark.

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http://dx.doi.org/10.1186/1756-0500-7-806DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4240845PMC
November 2014

Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior.

Nat Commun 2014 Sep 30;5:4943. Epub 2014 Sep 30.

1] China National GeneBank, BGI-Shenzhen, Building No. 11, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China [2] Centre for Social Evolution, Department of Biology, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark.

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http://dx.doi.org/10.1038/ncomms5943DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4200514PMC
September 2014

Exogenous metallothionein potentiates the insulin response at normal glucose concentrations in INS-1E beta-cells without disturbing intracellular ZnT8 expression.

Basic Clin Pharmacol Toxicol 2015 Feb 28;116(2):173-7. Epub 2014 Aug 28.

Department of Biomedicine - Pharmacology, Aarhus University, Aarhus, Denmark.

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http://dx.doi.org/10.1111/bcpt.12287DOI Listing
February 2015

Effects of zinc supplementation and zinc chelation on in vitro β-cell function in INS-1E cells.

BMC Res Notes 2014 Feb 7;7:84. Epub 2014 Feb 7.

Department of Biomedicine, Centre of Pharmacology and Pharmacotherapy, Health, Aarhus University, Wilhelm Meyers Allé 4, Bld 1240, Aarhus, 8000, Denmark.

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http://dx.doi.org/10.1186/1756-0500-7-84DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3923740PMC
February 2014

The fungal symbiont of Acromyrmex leaf-cutting ants expresses the full spectrum of genes to degrade cellulose and other plant cell wall polysaccharides.

BMC Genomics 2013 Dec 28;14:928. Epub 2013 Dec 28.

Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University, A,C, Meyers Vænge 15, DK-2450, Copenhagen, Denmark.

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http://dx.doi.org/10.1186/1471-2164-14-928DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3880420PMC
December 2013

Laccase detoxification mediates the nutritional alliance between leaf-cutting ants and fungus-garden symbionts.

Proc Natl Acad Sci U S A 2013 Jan 24;110(2):583-7. Epub 2012 Dec 24.

Centre for Social Evolution, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark.

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http://dx.doi.org/10.1073/pnas.1212709110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3545816PMC
January 2013

Old soldiers never die ....

Genome Biol 2012 Feb 22;13(2):144. Epub 2012 Feb 22.

Centre for Social Evolution, Department of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen, Denmark.

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http://dx.doi.org/10.1186/gb4000DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3334560PMC
February 2012

Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing.

BMC Med Genomics 2009 Jun 9;2:35. Epub 2009 Jun 9.

The Bioinformatics Centre, Department of biology, University of Copenhagen, 2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1186/1755-8794-2-35DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2702338PMC
June 2009

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

Authors:
Harukazu Suzuki Alistair R R Forrest Erik van Nimwegen Carsten O Daub Piotr J Balwierz Katharine M Irvine Timo Lassmann Timothy Ravasi Yuki Hasegawa Michiel J L de Hoon Shintaro Katayama Kate Schroder Piero Carninci Yasuhiro Tomaru Mutsumi Kanamori-Katayama Atsutaka Kubosaki Altuna Akalin Yoshinari Ando Erik Arner Maki Asada Hiroshi Asahara Timothy Bailey Vladimir B Bajic Denis Bauer Anthony G Beckhouse Nicolas Bertin Johan Björkegren Frank Brombacher Erika Bulger Alistair M Chalk Joe Chiba Nicole Cloonan Adam Dawe Josee Dostie Pär G Engström Magbubah Essack Geoffrey J Faulkner J Lynn Fink David Fredman Ko Fujimori Masaaki Furuno Takashi Gojobori Julian Gough Sean M Grimmond Mika Gustafsson Megumi Hashimoto Takehiro Hashimoto Mariko Hatakeyama Susanne Heinzel Winston Hide Oliver Hofmann Michael Hörnquist Lukasz Huminiecki Kazuho Ikeo Naoko Imamoto Satoshi Inoue Yusuke Inoue Ryoko Ishihara Takao Iwayanagi Anders Jacobsen Mandeep Kaur Hideya Kawaji Markus C Kerr Ryuichiro Kimura Syuhei Kimura Yasumasa Kimura Hiroaki Kitano Hisashi Koga Toshio Kojima Shinji Kondo Takeshi Konno Anders Krogh Adele Kruger Ajit Kumar Boris Lenhard Andreas Lennartsson Morten Lindow Marina Lizio Cameron Macpherson Norihiro Maeda Christopher A Maher Monique Maqungo Jessica Mar Nicholas A Matigian Hideo Matsuda John S Mattick Stuart Meier Sei Miyamoto Etsuko Miyamoto-Sato Kazuhiko Nakabayashi Yutaka Nakachi Mika Nakano Sanne Nygaard Toshitsugu Okayama Yasushi Okazaki Haruka Okuda-Yabukami Valerio Orlando Jun Otomo Mikhail Pachkov Nikolai Petrovsky Charles Plessy John Quackenbush Aleksandar Radovanovic Michael Rehli Rintaro Saito Albin Sandelin Sebastian Schmeier Christian Schönbach Ariel S Schwartz Colin A Semple Miho Sera Jessica Severin Katsuhiko Shirahige Cas Simons George St Laurent Masanori Suzuki Takahiro Suzuki Matthew J Sweet Ryan J Taft Shizu Takeda Yoichi Takenaka Kai Tan Martin S Taylor Rohan D Teasdale Jesper Tegnér Sarah Teichmann Eivind Valen Claes Wahlestedt Kazunori Waki Andrew Waterhouse Christine A Wells Ole Winther Linda Wu Kazumi Yamaguchi Hiroshi Yanagawa Jun Yasuda Mihaela Zavolan David A Hume Takahiro Arakawa Shiro Fukuda Kengo Imamura Chikatoshi Kai Ai Kaiho Tsugumi Kawashima Chika Kawazu Yayoi Kitazume Miki Kojima Hisashi Miura Kayoko Murakami Mitsuyoshi Murata Noriko Ninomiya Hiromi Nishiyori Shohei Noma Chihiro Ogawa Takuma Sano Christophe Simon Michihira Tagami Yukari Takahashi Jun Kawai Yoshihide Hayashizaki

Nat Genet 2009 May 19;41(5):553-62. Epub 2009 Apr 19.

RIKEN Omics Science Center, RIKEN Yokohama Institute, Kanagawa, Japan.

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http://dx.doi.org/10.1038/ng.375DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711855PMC
May 2009

Intragenomic matching reveals a huge potential for miRNA-mediated regulation in plants.

PLoS Comput Biol 2007 Nov;3(11):e238

Bioinformatics Centre, Department of Molecular Biology and Biotech Research and Innovation Centre, University of Copenhagen, Copenhagen, Denmark.

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http://dx.doi.org/10.1371/journal.pcbi.0030238DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2098865PMC
November 2007