Dr. Sandrine Imbeaud, PhD - Inserm U1162 - Functional Genomics of Solid Tumors

Dr. Sandrine Imbeaud

PhD

Inserm U1162

Functional Genomics of Solid Tumors

Paris | France

Dr. Sandrine Imbeaud, PhD - Inserm U1162 - Functional Genomics of Solid Tumors

Dr. Sandrine Imbeaud

PhD

Introduction

Primary Affiliation: Inserm U1162 - Paris , France

Publications

55Publications

3000Reads

1Profile Views

3472PubMed Central Citations

Netrin G1: its downregulation in the nucleus accumbens of cocaine-conditioned mice and genetic association in human cocaine dependence.

Addict Biol 2018 01 11;23(1):448-460. Epub 2017 Jan 11.

INSERM U894, Centre de Psychiatrie & Neurosciences, University Paris Descartes, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/adb.12485DOI Listing
January 2018
33 Reads
2 Citations

Germline and somatic DICER1 mutations in familial and sporadic liver tumors.

J Hepatol 2017 04 22;66(4):734-742. Epub 2016 Dec 22.

INSERM, Unité Mixte de Recherche (UMR) 1162, Génomique Fonctionnelle des Tumeurs Solides, Equipe Labellisée Ligue contre le Cancer, Paris, France; Université Paris Descartes, Labex Immuno-Oncology, Sorbonne Paris Cité, Paris, France; Université Paris 13, Sorbonne Paris Cité, Unité de Formation et de Recherche (UFR) Santé, Médecine, Biologie Humaine (SMBH), Bobigny, France; Université Paris Diderot, Institut Universitaire d'Hématologie, Paris, France; AP-HP, Hôpital Européen Georges Pompidou, Paris, France. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jhep.2016.12.010DOI Listing
April 2017
62 Reads
3 Citations
11.340 Impact Factor

Molecular Classification of Hepatocellular Adenoma Associates With Risk Factors, Bleeding, and Malignant Transformation.

Gastroenterology 2017 03 7;152(4):880-894.e6. Epub 2016 Dec 7.

Unité Mixte de Recherche 1162, Génomique Fonctionnelle des Tumeurs Solides, Institut National de la Santé et de la Recherche Médicale, Université Paris Descartes, Université Paris Diderot, Paris, France; Assistance Publique Hôpitaux de Paris, Hôpital Européen Georges Pompidou, Département d'Oncologie, Paris, France. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1053/j.gastro.2016.11.042DOI Listing
March 2017
145 Reads
12 Citations
16.720 Impact Factor

Genotype-phenotype correlation of CTNNB1 mutations reveals different ß-catenin activity associated with liver tumor progression.

Hepatology 2016 12 11;64(6):2047-2061. Epub 2016 Jun 11.

Inserm, UMR-1162, Functional Genomics of Solid Tumors, Equipe labellisée Ligue Contre le Cancer, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/hep.28638DOI Listing
December 2016
45 Reads
16 Citations
11.055 Impact Factor

A MYC-aurora kinase A protein complex represents an actionable drug target in p53-altered liver cancer.

Nat Med 2016 07 23;22(7):744-53. Epub 2016 May 23.

Division of Translational Gastrointestinal Oncology, Department of Internal Medicine I, University of Tuebingen, Tuebingen, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nm.4107DOI Listing
July 2016
134 Reads
30 Citations
27.363 Impact Factor

Adeno-associated virus type 2 as an oncogenic virus in human hepatocellular carcinoma.

Mol Cell Oncol 2016 Mar 19;3(2):e1095271. Epub 2016 Jan 19.

Inserm, UMR-1162, Génomique fonctionnelle des Tumeurs solides, Equipe Labellisée Ligue Contre le Cancer, Paris, F-75010 France; Université Paris Descartes, Labex Immuno-Oncology, Sorbonne Paris Cité, Faculté de Médecine, Paris, France; Université Paris 13, Sorbonne Paris Cité, UFR SMBH, F-93000 Bobigny, France; Université Paris Diderot, F-75013 Paris; Assistance Publique-Hôpitaux de Paris, Hopital Europeen Georges Pompidou, F-75015 Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/23723556.2015.1095271DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4905403PMC
March 2016
3 Reads
4 Citations

AAV2 and Hepatocellular Carcinoma.

Hum Gene Ther 2016 Mar;27(3):211-3

1 INSERM, UMR-1162, Génomique fonctionnelle des Tumeurs solides, Equipe Labellisée Ligue Contre le Cancer , Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/hum.2016.002DOI Listing
March 2016
59 Reads
1 Citation
3.755 Impact Factor

Recurrent AAV2-related insertional mutagenesis in human hepatocellular carcinomas.

Nat Genet 2015 Oct 24;47(10):1187-93. Epub 2015 Aug 24.

INSERM, Unité Mixte de Recherche (UMR) 1162, Génomique Fonctionnelle des Tumeurs Solides, Equipe Labellisée Ligue contre le Cancer, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ng.3389DOI Listing
October 2015
112 Reads
65 Citations
29.352 Impact Factor

DNA methylation-based prognosis and epidrivers in hepatocellular carcinoma.

Hepatology 2015 Jun 18;61(6):1945-56. Epub 2015 Mar 18.

Liver Cancer Research Program, Division of Liver Diseases, Tisch Cancer Institute, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/hep.27732DOI Listing
June 2015
39 Reads
38 Citations
11.055 Impact Factor

Authors' response: virus-host interactions in HBV-related hepatocellular carcinoma: more to be revealed?

Gut 2015 May 20;64(5):853-4. Epub 2014 Oct 20.

Inserm, UMR-1162, Génomique fonctionnelle des tumeurs solides, IUH, Paris, France Faculté de Médecine, Université Paris Descartes, Labex Immuno-oncology, Sorbonne Paris Cité, Paris, France Université Paris 13, Sorbonne Paris Cité, UFR SMBH, Bobigny, France Université Paris Diderot, Paris, France Assistance Publique-Hôpitaux de Paris, Hopital Europeen Georges Pompidou, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1136/gutjnl-2014-308482DOI Listing
May 2015
10 Reads
3 Citations
14.660 Impact Factor

Integration of tumour and viral genomic characterizations in HBV-related hepatocellular carcinomas.

Gut 2015 May 9;64(5):820-9. Epub 2014 Jun 9.

Inserm, UMR-674, Génomique fonctionnelle des tumeurs solides, IUH, Paris, France Université Paris Descartes, Labex Immuno-oncology, Sorbonne Paris Cité, Faculté de Médecine, Paris, France Hopital Europeen Georges Pompidou, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1136/gutjnl-2013-306228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4392232PMC
May 2015
164 Reads
23 Citations
14.660 Impact Factor

Unique genomic profile of fibrolamellar hepatocellular carcinoma.

Gastroenterology 2015 Apr 31;148(4):806-18.e10. Epub 2014 Dec 31.

HCC Translational Research Laboratory, Barcelona Clinic Liver Cancer Group, Liver Unit, Pathology Department, Institut d'Investigacions Biomèdiques August Pi i Sunyer, CIBERehd, Hospital Clínic, Universitat de Barcelona, Catalonia, Spain; Liver Cancer Program, Tisch Cancer Institute, Division of Liver Diseases, Department of Medicine, Recanati/Miller Transplantation Institute; Department of Pathology, Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York; Institució Catalana de Recerca i Estudis Avançats, Barcelona, Catalonia, Spain. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1053/j.gastro.2014.12.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4521774PMC
April 2015
71 Reads
23 Citations
16.720 Impact Factor

Hsa-miR-31-3p expression is linked to progression-free survival in patients with KRAS wild-type metastatic colorectal cancer treated with anti-EGFR therapy.

Clin Cancer Res 2014 Jun 25;20(12):3338-47. Epub 2014 Apr 25.

Authors' Affiliations: Université Paris Sorbonne Cité; INSERM UMR-S775 Bases Moléculaires de la réponse aux xénobiotiques; INSERM UMR-S674 Genomique Fonctionnelle des Tumeurs; Integragen S.A., Evry; Université Pierre et Marie Curie; Assistance Publique-Hôpitaux de Paris, Hôpital Pitié Salpétrière; Université Pierre et Marie Curie; Assistance Publique-Hôpitaux de Paris, Hôpital Saint-Antoine; Assistance Publique-Hôpitaux de Paris, Hôpital Européen Georges Pompidou, service d'Hépato-Gastro-Entérologie et d'Oncologie Digestive; Université Paris-Est Créteil; Assistance Publique-Hôpitaux de Paris, Hôpital Henri Mondor, Créteil; Department of Medicine, Institut Gustave Roussy, Villejuif; and Department of Biology, Assistance Publique-Hôpitaux de Paris, European Georges Pompidou, Paris; Université de Reims Champagne-Ardenne; Centre Hospitalier Universitaire de Reims, Reims; Service d'Anatomo-Pathologie, Centre Val d'Aurelle Paul-Lamarque, Montpellier; Université Clermont-Ferrand, Centre Jean Perrin, Clermont-Ferrand, France; Department of Gastroenterology, GI Cancer Unit; Department of Pathological Anatomy, Erasme University Hospital, Brussels; Digestive Oncology Unit, University Hospital Gasthuisberg, Leuven, Belgium; Bioinformatics Core Facility, Swiss Institute of Bioinformatics, Lausanne, Switzerland; Haartman Institute, University of Helsinki; Department of Oncology, Helsinki University Central Hospital and Helsinki University; HUSLAB, Department of Pathology and Genetic Laboratory, Helsinki; and Department of Oncology and Radiotherapy, Turku University Hospital, Turku, FinlandAuthors' Affiliations: Université Paris Sorbonne Cité; INSERM UMR-S775 Bases Moléculaires de la réponse aux xénobiotiques; INSERM UMR-S674 Genomique Fonctionnelle des Tumeurs; Integragen S.A., Evry; Université Pierre et Marie Curie; Assistance Publique-Hôpitaux de Paris, Hôpital Pitié Salpétrière; Université Pierre et Marie Curie; Assistance Publique-Hôpit

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1078-0432.CCR-13-2750DOI Listing
June 2014
161 Reads
24 Citations
8.722 Impact Factor

Genomic profiling of hepatocellular adenomas reveals recurrent FRK-activating mutations and the mechanisms of malignant transformation.

Cancer Cell 2014 Apr;25(4):428-41

INSERM, UMR-1162, Génomique fonctionnelle des tumeurs solides, IUH, 75010 Paris, France; Labex Immuno-oncology, Université Paris Descartes, Sorbonne Paris Cité, Faculté de Médecine, 75006 Paris, France; Assistance Publique-Hôpitaux de Paris, Hôpital Européen Georges-Pompidou, 75015 Paris, France. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.ccr.2014.03.005DOI Listing
April 2014
76 Reads
46 Citations
23.523 Impact Factor

Molecular classification of malignant pleural mesothelioma: identification of a poor prognosis subgroup linked to the epithelial-to-mesenchymal transition.

Clin Cancer Res 2014 Mar 17;20(5):1323-34. Epub 2014 Jan 17.

Authors' Affiliations: Ligue Nationale Contre Le Cancer, Programme Cartes d'Identité des Tumeurs (CIT); INSERM, UMR-1162, Génomique fonctionnel des tumeurs solides, IUH; Université Paris Descartes; Université Paris Diderot; Université Paris 13; Labex Immuno-Oncology; Sorbonne Paris Cité; AP-HP, GHU Ouest, Hôpital Européen Georges Pompidou, Laboratoire d'Anatomie Pathologique; AP-HP, GHU Ouest, Hôpital Européen Georges Pompidou, Service de Chirurgie Thoracique, Paris; CHRU Lille, Service de Chirurgie Cardiaque; CHRU Lille, Université de Lille II, Institut de Pathologie, Centre de Biologie-Pathologie, 59037 Lille; CHU Caen, Service d'Anatomo-Pathologie; INSERM, U1086, Caen; CHU Nice, Laboratoire de Pathologie Clinique et Expérimentale (LPCE) et Biobanque Humaine, Hôpital Pasteur, Nice; Centre Hospitalier Intercommunal de Créteil, Service de Pneumologie et de Pathologie Professionnelle; and INSERM, U955, Equipe 4, Créteil, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1078-0432.CCR-13-2429DOI Listing
March 2014
63 Reads
22 Citations
8.722 Impact Factor

Signatures of mutational processes in human cancer.

Nature 2013 Aug 14;500(7463):415-21. Epub 2013 Aug 14.

Cancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nature12477DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3776390PMC
August 2013
107 Reads
1493 Citations
42.351 Impact Factor

Tissue metabolomics of hepatocellular carcinoma: tumor energy metabolism and the role of transcriptomic classification.

Hepatology 2013 Jul 8;58(1):229-38. Epub 2013 May 8.

Hepatology Research Group, Department of Clinical Research, University of Bern, Switzerland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/hep.26350DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3695036PMC
July 2013
38 Reads
52 Citations
11.055 Impact Factor

A hepatocellular carcinoma 5-gene score associated with survival of patients after liver resection.

Gastroenterology 2013 Jul 6;145(1):176-187. Epub 2013 Apr 6.

Inserm, UMR-674, Génomique Fonctionnelle des Tumeurs Solides, IUH, Paris, France; Université Paris Descartes, Labex Immuno-Oncology, Sorbonne Paris Cité, Faculté de Médecine, Paris, France; Assistance Publique-Hôpitaux de Paris, Hôpital Européen Georges Pompidou, Paris, France. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1053/j.gastro.2013.03.051DOI Listing
July 2013
43 Reads
71 Citations
16.720 Impact Factor

Recurrent inactivating mutations of ARID2 in non-small cell lung carcinoma.

Int J Cancer 2013 May 20;132(9):2217-21. Epub 2012 Nov 20.

Molecular Basis of Response to Xenobiotics, INSERM UMR-S775, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/ijc.27900DOI Listing
May 2013
111 Reads
22 Citations
5.085 Impact Factor

Next-generation sequencing identified new oncogenes and tumor suppressor genes in human hepatic tumors.

Oncoimmunology 2012 Dec;1(9):1612-1613

Inserm UMR-674; Génomique Fonctionnelle des Tumeurs Solides; IUH; Paris, France ; Université Paris Descartes; Labex Immuno-oncology; Faculté de Médecine; Sorbonne Paris Cité; Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.4161/onci.21480DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3525620PMC
December 2012
2 Reads
11 Citations
6.283 Impact Factor

Integrated analysis of somatic mutations and focal copy-number changes identifies key genes and pathways in hepatocellular carcinoma.

Nat Genet 2012 May 6;44(6):694-8. Epub 2012 May 6.

Institut National de la Santé et de la Recherche Médicale (INSERM), Unité Mixte de Recherche (UMR)-674, Génomique Fonctionnelle des Tumeurs Solides, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ng.2256DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3819251PMC
May 2012
63 Reads
337 Citations
29.352 Impact Factor

Identification of molecular pathways involved in oxaliplatin-associated sinusoidal dilatation.

J Hepatol 2012 Apr 24;56(4):869-76. Epub 2011 Dec 24.

Paris Descartes University, Paris Sorbonne Cité, INSERM UMR-S775, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jhep.2011.10.023DOI Listing
April 2012
10 Reads
9 Citations
11.340 Impact Factor

Increased growth rate of vestibular schwannoma after resection of contralateral tumor in neurofibromatosis type 2.

Neuro Oncol 2011 Oct 28;13(10):1125-32. Epub 2011 Jul 28.

Service de Neurochirurgie, Assistance Publique–Hôpitaux de Paris, Hôpital Beaujon, Clichy, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/neuonc/nor101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3177662PMC
October 2011
9 Reads
5.562 Impact Factor

SMARCA2 and other genome-wide supported schizophrenia-associated genes: regulation by REST/NRSF, network organization and primate-specific evolution.

Hum Mol Genet 2010 Jul 10;19(14):2841-57. Epub 2010 May 10.

INSERM U675/U894, Centre Psychiatrie & Neurosciences, Université Paris-Descartes, 75014 Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/hmg/ddq184DOI Listing
July 2010
63 Reads
25 Citations
6.393 Impact Factor

Identification of novel oncogenes and tumor suppressors in hepatocellular carcinoma.

Semin Liver Dis 2010 Feb 19;30(1):75-86. Epub 2010 Feb 19.

Inserm, U674, Génomique Fonctionnelle des Tumeurs Solides, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1055/s-0030-1247134DOI Listing
February 2010
15 Reads
28 Citations
4.950 Impact Factor

Loss of hepatocyte nuclear factor 1alpha function in human hepatocellular adenomas leads to aberrant activation of signaling pathways involved in tumorigenesis.

Hepatology 2010 Feb;51(2):557-66

Institut National de la Sante et de la Recherche Medicale, U674, Génomique fonctionnelle des tumeurs solides, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/hep.23362DOI Listing
February 2010
43 Reads
15 Citations
11.055 Impact Factor

Mutations in the Saccharomyces cerevisiae kinase Cbk1p lead to a fertility defect that can be suppressed by the absence of Brr1p or Mpt5p (Puf5p), proteins involved in RNA metabolism.

Genetics 2009 Sep 22;183(1):161-73. Epub 2009 Jun 22.

Centre de Génétique Moléculaire du Centre National de la Recherche Scientifique, FRE3144, FRC3115, F-91198, Gif-sur-Yvette, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1534/genetics.109.105130DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746141PMC
September 2009
6 Reads
8 Citations

Global analysis of extracytoplasmic stress signaling in Escherichia coli.

PLoS Genet 2009 Sep 18;5(9):e1000651. Epub 2009 Sep 18.

Laboratoire de Signalisation et Réseaux de Régulations Bactériens, Université Paris-Sud 11, CNRS, UMR8621, Institut de Génétique et Microbiologie Bâtiment 400, Orsay Cedex, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pgen.1000651DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2731931PMC
September 2009
62 Reads
70 Citations

A functional and regulatory network associated with PIP expression in human breast cancer.

PLoS One 2009 5;4(3):e4696. Epub 2009 Mar 5.

Array s/IMAGE, Genexpress, Functional Genomics and Systems Biology for Health, LGN-UMR 7091-CNRS and Pierre & Marie Curie University, Paris VI, Villejuif, France.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0004696PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2650800PMC
June 2009
5 Reads
6 Citations
3.234 Impact Factor

Genomic consequences of cytochrome P450 2C9 overexpression in human hepatoma cells.

Chem Res Toxicol 2009 May;22(5):779-87

Université Paris Descartes and INSERM UMR U775, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/tx800417uDOI Listing
May 2009
7 Reads
1 Citation
3.530 Impact Factor

Frequent in-frame somatic deletions activate gp130 in inflammatory hepatocellular tumours.

Nature 2009 Jan 19;457(7226):200-4. Epub 2008 Nov 19.

Inserm, U674, Génomique fonctionnelle des tumeurs solides, Paris F-75010, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nature07475DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2695248PMC
January 2009
4 Reads
110 Citations
42.351 Impact Factor

The beta-catenin pathway is activated in focal nodular hyperplasia but not in cirrhotic FNH-like nodules.

J Hepatol 2008 Jul 18;49(1):61-71. Epub 2008 Apr 18.

Inserm, U674, Génomique fonctionnelle des tumeurs solides, 27 rue Juliette Dodu, Paris F-75010, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jhep.2008.03.013DOI Listing
July 2008
66 Reads
15 Citations
11.340 Impact Factor

Response of human renal tubular cells to cyclosporine and sirolimus: a toxicogenomic study.

Toxicol Appl Pharmacol 2008 Jun 1;229(2):184-96. Epub 2008 Feb 1.

INSERM U775, Université Paris V, Centre Universitaire des Saints Pères, Paris, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.taap.2008.01.019DOI Listing
June 2008
46 Reads
8 Citations
3.705 Impact Factor

The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts.

Authors:
Chisato Yamasaki Katsuhiko Murakami Yasuyuki Fujii Yoshiharu Sato Erimi Harada Jun-ichi Takeda Takayuki Taniya Ryuichi Sakate Shingo Kikugawa Makoto Shimada Motohiko Tanino Kanako O Koyanagi Roberto A Barrero Craig Gough Hong-Woo Chun Takuya Habara Hideki Hanaoka Yosuke Hayakawa Phillip B Hilton Yayoi Kaneko Masako Kanno Yoshihiro Kawahara Toshiyuki Kawamura Akihiro Matsuya Naoki Nagata Kensaku Nishikata Akiko Ogura Noda Shin Nurimoto Naomi Saichi Hiroaki Sakai Ryoko Sanbonmatsu Rie Shiba Mami Suzuki Kazuhiko Takabayashi Aiko Takahashi Takuro Tamura Masayuki Tanaka Susumu Tanaka Fusano Todokoro Kaori Yamaguchi Naoyuki Yamamoto Toshihisa Okido Jun Mashima Aki Hashizume Lihua Jin Kyung-Bum Lee Yi-Chueh Lin Asami Nozaki Katsunaga Sakai Masahito Tada Satoru Miyazaki Takashi Makino Hajime Ohyanagi Naoki Osato Nobuhiko Tanaka Yoshiyuki Suzuki Kazuho Ikeo Naruya Saitou Hideaki Sugawara Claire O'Donovan Tamara Kulikova Eleanor Whitfield Brian Halligan Mary Shimoyama Simon Twigger Kei Yura Kouichi Kimura Tomohiro Yasuda Tetsuo Nishikawa Yutaka Akiyama Chie Motono Yuri Mukai Hideki Nagasaki Makiko Suwa Paul Horton Reiko Kikuno Osamu Ohara Doron Lancet Eric Eveno Esther Graudens Sandrine Imbeaud Marie Anne Debily Yoshihide Hayashizaki Clara Amid Michael Han Andreas Osanger Toshinori Endo Michael A Thomas Mika Hirakawa Wojciech Makalowski Mitsuteru Nakao Nam-Soon Kim Hyang-Sook Yoo Sandro J De Souza Maria de Fatima Bonaldo Yoshihito Niimura Vladimir Kuryshev Ingo Schupp Stefan Wiemann Matthew Bellgard Masafumi Shionyu Libin Jia Danielle Thierry-Mieg Jean Thierry-Mieg Lukas Wagner Qinghua Zhang Mitiko Go Shinsei Minoshima Masafumi Ohtsubo Kousuke Hanada Peter Tonellato Takao Isogai Ji Zhang Boris Lenhard Sangsoo Kim Zhu Chen Ursula Hinz Anne Estreicher Kenta Nakai Izabela Makalowska Winston Hide Nicola Tiffin Laurens Wilming Ranajit Chakraborty Marcelo Bento Soares Maria Luisa Chiusano Yutaka Suzuki Charles Auffray Yumi Yamaguchi-Kabata Takeshi Itoh Teruyoshi Hishiki Satoshi Fukuchi Ken Nishikawa Sumio Sugano Nobuo Nomura Yoshio Tateno Tadashi Imanishi Takashi Gojobori

Nucleic Acids Res 2008 Jan 18;36(Database issue):D793-9. Epub 2007 Dec 18.

Japan Biological Information Research Center, Japan Biological Informatics Consortium, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkm999DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238988PMC
January 2008
144 Reads
41 Citations
9.112 Impact Factor

Functional Annotation: extracting functional and regulatory order from microarrays.

Mol Syst Biol 2005 25;1:2005.0009. Epub 2005 May 25.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/msb4100013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1681465PMC
August 2006
11 Reads
1 Citation
10.872 Impact Factor

Deciphering cellular states of innate tumor drug responses.

Genome Biol 2006 15;7(3):R19. Epub 2006 Mar 15.

Array s/IMAGE, Genexpress, Functional Genomics and Systems Biology for Health, LGN-UMR 7091-CNRS and Pierre and Marie Curie University, Paris VI, Villejuif, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/gb-2006-7-3-r19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1557757PMC
July 2006
13 Reads
48 Citations

Coordination of intrinsic, extrinsic, and endoplasmic reticulum-mediated apoptosis by imatinib mesylate combined with arsenic trioxide in chronic myeloid leukemia.

Blood 2006 Feb 25;107(4):1582-90. Epub 2005 Oct 25.

State Key Laboratory of Medical Genomics and Shanghai Institute of Ruijin Hospital, School of Medicine of Shanghai Jiao Tong University, Shanghai 200025, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1182/blood-2005-06-2318DOI Listing
February 2006
68 Reads
15 Citations
10.452 Impact Factor

XX sex reversal, palmoplantar keratoderma, and predisposition to squamous cell carcinoma: genetic analysis in one family.

Am J Med Genet A 2005 Oct;138A(3):241-6

Dipartimento di Patologia Umana ed Ereditaria, Sezione di Biologia Generale e Genetica Medica, Università di Pavia, Pavia, Italia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/ajmg.a.30935DOI Listing
October 2005
44 Reads
2 Citations
2.160 Impact Factor

Functional coupling of adenine nucleotide translocase and mitochondrial creatine kinase is enhanced after exercise training in lung transplant skeletal muscle.

Am J Physiol Regul Integr Comp Physiol 2005 Oct 14;289(4):R1144-54. Epub 2005 Jul 14.

Laboratoire de Bioénergétique Fondamentale et Appliquée, Institut National de la Santé et de la Recherche Médicale E221, Université Joseph Fourier, Grenoble, France.

View Article

Download full-text PDF

Source
http://ajpregu.physiology.org/content/ajpregu/289/4/R1144.fu
Web Search
http://ajpregu.physiology.org/cgi/doi/10.1152/ajpregu.00229.
Publisher Site
http://dx.doi.org/10.1152/ajpregu.00229.2005DOI Listing
October 2005
16 Reads
5 Citations
3.110 Impact Factor

'The 39 steps' in gene expression profiling: critical issues and proposed best practices for microarray experiments.

Drug Discov Today 2005 Sep;10(17):1175-82

Array s/IMAGE, Genexpress, Functional Genomics and Systems Biology for Health, LGN UMR 7091, CNRS and Pierre and Marie Curie University, Paris VI, Villejuif, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/S1359-6446(05)03565-8DOI Listing
September 2005
7 Reads
13 Citations
6.691 Impact Factor

Systems analysis of transcriptome and proteome in retinoic acid/arsenic trioxide-induced cell differentiation/apoptosis of promyelocytic leukemia.

Proc Natl Acad Sci U S A 2005 May 13;102(21):7653-8. Epub 2005 May 13.

State Key Laboratory of Medical Genomics, Ruijin Hospital, Shanghai Second Medical University, 197 Rui Jin Road II, Shanghai 200025, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0502825102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1140456PMC
May 2005
43 Reads
51 Citations
9.810 Impact Factor

Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces.

Nucleic Acids Res 2005 Mar 30;33(6):e56. Epub 2005 Mar 30.

Array s/IMAGE, Genexpress, Functional Genomics and Systems Biology for Health LGN-UMR 7091, CNRS and Pierre and Marie Curie University of Paris 6, 7, rue Guy Môquet, 94801 Villejuif, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gni054DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1072807PMC
March 2005
10 Reads
127 Citations
9.112 Impact Factor

Integrative annotation of 21,037 human genes validated by full-length cDNA clones.

Authors:
Tadashi Imanishi Takeshi Itoh Yutaka Suzuki Claire O'Donovan Satoshi Fukuchi Kanako O Koyanagi Roberto A Barrero Takuro Tamura Yumi Yamaguchi-Kabata Motohiko Tanino Kei Yura Satoru Miyazaki Kazuho Ikeo Keiichi Homma Arek Kasprzyk Tetsuo Nishikawa Mika Hirakawa Jean Thierry-Mieg Danielle Thierry-Mieg Jennifer Ashurst Libin Jia Mitsuteru Nakao Michael A Thomas Nicola Mulder Youla Karavidopoulou Lihua Jin Sangsoo Kim Tomohiro Yasuda Boris Lenhard Eric Eveno Yoshiyuki Suzuki Chisato Yamasaki Jun-ichi Takeda Craig Gough Phillip Hilton Yasuyuki Fujii Hiroaki Sakai Susumu Tanaka Clara Amid Matthew Bellgard Maria de Fatima Bonaldo Hidemasa Bono Susan K Bromberg Anthony J Brookes Elspeth Bruford Piero Carninci Claude Chelala Christine Couillault Sandro J de Souza Marie-Anne Debily Marie-Dominique Devignes Inna Dubchak Toshinori Endo Anne Estreicher Eduardo Eyras Kaoru Fukami-Kobayashi Gopal R Gopinath Esther Graudens Yoonsoo Hahn Michael Han Ze-Guang Han Kousuke Hanada Hideki Hanaoka Erimi Harada Katsuyuki Hashimoto Ursula Hinz Momoki Hirai Teruyoshi Hishiki Ian Hopkinson Sandrine Imbeaud Hidetoshi Inoko Alexander Kanapin Yayoi Kaneko Takeya Kasukawa Janet Kelso Paul Kersey Reiko Kikuno Kouichi Kimura Bernhard Korn Vladimir Kuryshev Izabela Makalowska Takashi Makino Shuhei Mano Regine Mariage-Samson Jun Mashima Hideo Matsuda Hans-Werner Mewes Shinsei Minoshima Keiichi Nagai Hideki Nagasaki Naoki Nagata Rajni Nigam Osamu Ogasawara Osamu Ohara Masafumi Ohtsubo Norihiro Okada Toshihisa Okido Satoshi Oota Motonori Ota Toshio Ota Tetsuji Otsuki Dominique Piatier-Tonneau Annemarie Poustka Shuang-Xi Ren Naruya Saitou Katsunaga Sakai Shigetaka Sakamoto Ryuichi Sakate Ingo Schupp Florence Servant Stephen Sherry Rie Shiba Nobuyoshi Shimizu Mary Shimoyama Andrew J Simpson Bento Soares Charles Steward Makiko Suwa Mami Suzuki Aiko Takahashi Gen Tamiya Hiroshi Tanaka Todd Taylor Joseph D Terwilliger Per Unneberg Vamsi Veeramachaneni Shinya Watanabe Laurens Wilming Norikazu Yasuda Hyang-Sook Yoo Marvin Stodolsky Wojciech Makalowski Mitiko Go Kenta Nakai Toshihisa Takagi Minoru Kanehisa Yoshiyuki Sakaki John Quackenbush Yasushi Okazaki Yoshihide Hayashizaki Winston Hide Ranajit Chakraborty Ken Nishikawa Hideaki Sugawara Yoshio Tateno Zhu Chen Michio Oishi Peter Tonellato Rolf Apweiler Kousaku Okubo Lukas Wagner Stefan Wiemann Robert L Strausberg Takao Isogai Charles Auffray Nobuo Nomura Takashi Gojobori Sumio Sugano

PLoS Biol 2004 Jun 20;2(6):e162. Epub 2004 Apr 20.

Integrated Database Group, Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pbio.0020162DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC393292PMC
June 2004
94 Reads
138 Citations

From functional genomics to systems biology: concepts and practices.

C R Biol 2003 Oct-Nov;326(10-11):879-92

Genexpress, Functional Genomics and Systemic Biology for Health, CNRS FRE 2571, 7, rue Guy-Môquet, BP 8, 94801 Villejuif cedex, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.crvi.2003.09.033DOI Listing
May 2004
9 Reads
24 Citations
0.981 Impact Factor

Self-organized living systems: conjunction of a stable organization with chaotic fluctuations in biological space-time.

Philos Trans A Math Phys Eng Sci 2003 Jun;361(1807):1125-39

Genexpress, Functional Genomics and Systemic Biology for Health, CNRS FRE 2571, 7 rue Guy Moquet, BP8, 94801 Villejuif Cedex, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1098/rsta.2003.1188DOI Listing
June 2003
28 Reads
6 Citations
2.864 Impact Factor