Publications by authors named "Samuel L Volchenboum"

40Publications

Tailoring Therapy for Children With Neuroblastoma on the Basis of Risk Group Classification: Past, Present, and Future.

JCO Clin Cancer Inform 2020 Oct;4:895-905

Department of Pediatrics and Comer Children's Hospital, University of Chicago, Chicago, IL.

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http://dx.doi.org/10.1200/CCI.20.00074DOI Listing
October 2020

Using big data in pediatric oncology: Current applications and future directions.

Semin Oncol 2020 02 29;47(1):56-64. Epub 2020 Feb 29.

Pediatric Hematology Oncology, University of Chicago, Chicago, IL. Electronic address:

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http://dx.doi.org/10.1053/j.seminoncol.2020.02.006DOI Listing
February 2020

Using photoplethysmography data to estimate heart rate variability and its association with organ dysfunction in pediatric oncology patients.

NPJ Digit Med 2018 25;1:29. Epub 2018 Jul 25.

3Division of Critical Care Medicine, Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL USA.

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http://dx.doi.org/10.1038/s41746-018-0038-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550162PMC
July 2018

Use of Wearable, Mobile, and Sensor Technology in Cancer Clinical Trials.

JCO Clin Cancer Inform 2018 12;2:1-11

Suzanne M. Cox and Samuel L. Volchenboum, University of Chicago, Chicago, IL; and Ashley Lane and Samuel L. Volchenboum, Litmus Health, Austin, TX.

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http://dx.doi.org/10.1200/CCI.17.00147DOI Listing
December 2018

Evaluation of Genetic Predisposition for MYCN-Amplified Neuroblastoma.

J Natl Cancer Inst 2017 10;109(10)

Affiliations of authors: Section of Hematology/Oncology, Department of Pediatrics (EAH, MAA, ADS, SLV, SLC), Section of Genetic Medicine, Department of Medicine (BES), and Institute for Genomics and Systems Biology, Center for Data Intensive Science (BES), University of Chicago, Chicago, IL; Division of Oncology and Center for Childhood Cancer Research and Department of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA (ZV, MD, LM, JMM, SJD); Department of Pediatrics and Abramson Family Cancer Research Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA (JMM, SJD); Department of Pediatrics, Hofstra-Northwell School of Medicine and The Feinstein Institute for Medical Research, Manhasset, NY (KO).

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http://dx.doi.org/10.1093/jnci/djx093DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6279278PMC
October 2017

Simplifying the use of pharmacogenomics in clinical practice: Building the genomic prescribing system.

J Biomed Inform 2017 Nov 28;75:110-121. Epub 2017 Sep 28.

Center for Personalized Therapeutics, University of Chicago, Chicago, IL, USA; Department of Medicine, University of Chicago, Chicago, IL, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jbi.2017.09.012DOI Listing
November 2017

Data Commons to Support Pediatric Cancer Research.

Am Soc Clin Oncol Educ Book 2017 ;37:746-752

From the University of Chicago, Chicago, IL; Children's Hospital of Philadelphia, Philadelphia, PA.

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http://dx.doi.org/10.1200/EDBK_175029DOI Listing
November 2017

Neuroblastoma survivors are at increased risk for second malignancies: A report from the International Neuroblastoma Risk Group Project.

Eur J Cancer 2017 02 26;72:177-185. Epub 2016 Dec 26.

Division of Oncology and Center for Childhood Cancer Research, Children's Hospital of Philadelphia, Philadelphia, PA, USA; Department of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA, USA; Department of Pediatrics Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Abramson Family Cancer Research Institute, Philadelphia, PA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ejca.2016.11.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5258837PMC
February 2017

A method for whole protein isolation from human cranial bone.

Anal Biochem 2016 Dec 25;515:33-39. Epub 2016 Sep 25.

The Laboratory of Craniofacial Development and Biology, Section of Plastic and Reconstructive Surgery, University of Chicago Medicine, United States. Electronic address:

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http://dx.doi.org/10.1016/j.ab.2016.09.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5584578PMC
December 2016

An Approach to Acquiring, Normalizing, and Managing EHR Data From a Clinical Data Repository for Studying Pressure Ulcer Outcomes.

J Wound Ostomy Continence Nurs 2016 Jan-Feb;43(1):39-45

William V. Padula, PhD, MS, Department of Health Policy and Management, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland. Leon Blackshaw, Masters of Science in Analytics Program, Graham School, University of Chicago, Chicago, Illinois. C. Tod Brindle, RN, MSN, CWOCN, Wound and Ostomy Consultant Nurse, Virginia Commonwealth University Health System, Richmond, Virginia. Samuel L. Volchenboum, MD, PhD, MS, Assistant Professor of Pediatrics and Director of Informatics, University of Chicago Medicine, Chicago, Illinois.

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http://dx.doi.org/10.1097/WON.0000000000000185DOI Listing
February 2017

Advances in Risk Classification and Treatment Strategies for Neuroblastoma.

J Clin Oncol 2015 Sep 24;33(27):3008-17. Epub 2015 Aug 24.

Navin R. Pinto, Mark A. Applebaum, Samuel L. Volchenboum, and Susan L. Cohn, Comer Children's Hospital, University of Chicago, Chicago, IL; Katherine K. Matthay, University of California San Francisco (UCSF) Benioff Children's Hospital, UCSF School of Medicine, San Francisco, CA; Wendy B. London, Dana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA; Peter F. Ambros, Children's Cancer Research Institute, St Anna Kinderkrebsforschung, Vienna, Austria; Akira Nakagawara, Saga Medical Center Koseikan, Saga, Japan; Frank Berthold, Children's Hospital, University of Cologne, Koln, Germany; Gudrun Schleiermacher, Institut Curie, Paris; Dominique Valteau-Couanet, Gustave Roussy, Villejuif, France; Julie R. Park, Seattle Children's Hospital, Fred Hutchinson Cancer Research Center, University of Washington, Seattle, WA; and Andrew D.J. Pearson, Institute of Cancer Research and Royal Marsden Hospital, Surrey, United Kingdom.

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http://jco.ascopubs.org/content/33/27/3008.full.pdf
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http://200.40.135.66:90/toc/0873/2015/0873-20150920-27-07.pd
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http://jco.ascopubs.org/cgi/doi/10.1200/JCO.2014.59.4648
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http://dx.doi.org/10.1200/JCO.2014.59.4648DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567703PMC
September 2015

The quantitative changes in the yeast Hsp70 and Hsp90 interactomes upon DNA damage.

Data Brief 2015 Mar 7;2:12-5. Epub 2014 Nov 7.

Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.dib.2014.10.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459869PMC
March 2015

Establishing a translational genomics infrastructure in pediatric cancer: the GREAT KIDS experience.

Per Med 2015 Jun;12(3):221-229

Department of Pediatrics, The University of Chicago, 5801 S Ellis Ave, Chicago, IL 60637, USA.

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http://dx.doi.org/10.2217/pme.14.90DOI Listing
June 2015

Second malignancies in patients with neuroblastoma: the effects of risk-based therapy.

Pediatr Blood Cancer 2015 Jan 23;62(1):128-33. Epub 2014 Sep 23.

Departments of Pediatrics, University of Chicago, Chicago, Illinois.

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http://dx.doi.org/10.1002/pbc.25249DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237647PMC
January 2015

Metastatic neuroblastoma confined to distant lymph nodes (stage 4N) predicts outcome in patients with stage 4 disease: A study from the International Neuroblastoma Risk Group Database.

J Clin Oncol 2014 Apr 24;32(12):1228-35. Epub 2014 Mar 24.

Daniel A. Morgenstern and Meredith S. Irwin, Hospital for Sick Children and University of Toronto; Derek Stephens, Hospital for Sick Children, Toronto, ON, Canada; Daniel A. Morgenstern, Great Ormond Street Hospital for Children National Health Service (NHS) Foundation Trust, London; Andrew D.J. Pearson, The Royal Marsden NHS Foundation Trust, Sutton, Surrey, United Kingdom; Wendy B. London, Dana-Farber/Boston Children's Cancer and Blood Disorders Center, Boston, MA; Samuel L. Volchenboum and Susan L. Cohn, University of Chicago, Chicago, IL; Barbara Hero, University Children's Hospital, Köln, Germany; Andrea Di Cataldo, University of Catania, Catania, Italy; Akira Nakagawara, Chiba University School of Medicine, Chiba, Japan; Hiroyuki Shimada, University of Southern California at Los Angeles, Los Angeles; Katherine K. Matthay, University of California at San Francisco, San Francisco, CA; and Peter F. Ambros, St. Anna Kinderkrebsforschung, Vienna, Austria.

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http://dx.doi.org/10.1200/JCO.2013.53.6342DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4876342PMC
April 2014

Development of an open-source, flexible framework for complex inter-institutional disparate data sharing and collaboration.

AMIA Jt Summits Transl Sci Proc 2013 18;2013:103. Epub 2013 Mar 18.

Department of Pediatrics, University of Chicago, Chicago, IL; ; Center for Research Informatics, University of Chicago, Chicago, IL;

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December 2013

A novel algorithm for simplification of complex gene classifiers in cancer.

Cancer Res 2013 Sep 2;73(18):5625-32. Epub 2013 Aug 2.

Authors' Affiliations: Division of Hematology/Oncology, Department of Pediatrics, University of Texas Southwestern Medical Center and Children's Medical Center, Dallas, Texas; Department of Pathology, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma; Department of Pathology, University of Southern California and Children's Hospital of Los Angeles, Los Angeles, California; Department of Pathology and Laboratory Medicine, Nationwide Children's Hospital and Department of Pathology and Pediatrics, The Ohio State University, Columbus, Ohio; National Cancer Institute, Bethesda, Maryland; Division of Hematology/Oncology, Department of Pediatrics, University of Washington and Seattle Children's Hospital, Seattle, Washington; Department of Biostatistics, College of Public Health, University of Nebraska Medical Center, Omaha, Nebraska; The Section of Pediatric Hematology/Oncology, Department of Pediatrics, Department of Pathology, Center for Research Informatics, and The Computation Institute, University of Chicago, Chicago, Illinois.

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http://dx.doi.org/10.1158/0008-5472.CAN-13-0324DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4233649PMC
September 2013

Bioinformatic analysis and post-translational modification crosstalk prediction of lysine acetylation.

PLoS One 2011 2;6(12):e28228. Epub 2011 Dec 2.

Ben May Department for Cancer Research, University of Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0028228PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3229533PMC
July 2012

Rapid validation of Mascot search results via stable isotope labeling, pair picking, and deconvolution of fragmentation patterns.

Mol Cell Proteomics 2009 Aug 11;8(8):2011-22. Epub 2009 May 11.

Department of Pediatrics, The University of Chicago, Chicago, Illinois 60637, USA.

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http://dx.doi.org/10.1074/mcp.M800472-MCP200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2722775PMC
August 2009

Progress in defining and treating high-risk neuroblastoma: lessons from the bench and bedside.

J Clin Oncol 2009 Mar 26;27(7):1003-4. Epub 2009 Jan 26.

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http://dx.doi.org/10.1200/JCO.2008.20.2739DOI Listing
March 2009

3 + 3 not equal to (Rolling) 6.

J Clin Oncol 2008 Jan;26(2):170-1

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http://dx.doi.org/10.1200/JCO.2007.14.5052DOI Listing
January 2008