Samuel Cordey

Samuel Cordey

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Samuel Cordey

Samuel Cordey

Publications by authors named "Samuel Cordey"

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Enterovirus, parechovirus, adenovirus and herpes virus type 6 viraemia in fever without source.

Arch Dis Child 2020 Feb 28;105(2):180-186. Epub 2019 Aug 28.

Division of Pediatric Emergencies, Department of Child and Adolescent Medicine, Geneva University Hospitals and Medical School, Geneva, Switzerland.

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http://dx.doi.org/10.1136/archdischild-2019-317382DOI Listing
February 2020

Identification of Viral Signatures Using High-Throughput Sequencing on Blood of Patients With Kawasaki Disease.

Front Pediatr 2019 19;7:524. Epub 2019 Dec 19.

Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University Hospitals of Geneva & Faculty of Medicine, University of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.3389/fped.2019.00524DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6930886PMC
December 2019

Influenza A Virus Genetic Tools: From Clinical Sample to Molecular Clone.

Methods Mol Biol 2018 ;1836:33-58

Faculty of Medicine, CMU, Department of Microbiology and Molecular Medicine, University of Geneva, Geneva, Switzerland.

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http://link.springer.com/10.1007/978-1-4939-8678-1_3
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http://dx.doi.org/10.1007/978-1-4939-8678-1_3DOI Listing
April 2019

Novel human astroviruses in pediatric respiratory samples: A one-year survey in a Swiss tertiary care hospital.

J Med Virol 2018 11 16;90(11):1775-1778. Epub 2018 Jul 16.

Department of Pathology, Genetic, and Laboratory Medicine, Laboratory of virology, University Hospitals of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.1002/jmv.25246DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6175467PMC
November 2018

Usutu virus in cerebrospinal fluid: A 2-year survey in a Tertiary Care Hospital, Geneva, Switzerland.

J Med Virol 2018 03 9;90(3):609-611. Epub 2017 Nov 9.

Laboratory of Virology, University Hospitals of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.1002/jmv.24967DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5813136PMC
March 2018

Novel and classical human astroviruses in stool and cerebrospinal fluid: comprehensive screening in a tertiary care hospital, Switzerland.

Emerg Microbes Infect 2017 Sep 20;6(9):e84. Epub 2017 Sep 20.

Laboratory of Virology, Infectious Diseases Service, University Hospitals of Geneva, 1211 Geneva, Switzerland.

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http://dx.doi.org/10.1038/emi.2017.71DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5625321PMC
September 2017

Metagenomics analysis of red blood cell and fresh-frozen plasma units.

Transfusion 2017 07 11;57(7):1787-1800. Epub 2017 May 11.

Department of Medical Specialties, Division of Infectious Diseases and Division of Laboratory Medicine, University Hospitals of Geneva, Geneva.

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http://dx.doi.org/10.1111/trf.14148DOI Listing
July 2017

Hospital surveillance of influenza strains: a concordant image of viruses identified by the Swiss Sentinel system?

Influenza Other Respir Viruses 2017 01 31;11(1):41-47. Epub 2016 Aug 31.

Swiss National Reference Centre for Influenza, Geneva University Hospitals, Geneva, Switzerland.

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http://dx.doi.org/10.1111/irv.12417DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5155643PMC
January 2017

Novel human astroviruses: Novel human diseases?

J Clin Virol 2016 09 11;82:56-63. Epub 2016 Jul 11.

Laboratory of Virology, Division of Laboratory Medicine and Division of Infectious Diseases, University of Geneva Hospitals, 4 Rue Gabrielle Perret-Gentil, 1211 Geneva 14, Switzerland; University of Geneva Medical School, 1 Rue Michel-Servet, 1211 Geneva 4, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.jcv.2016.07.004DOI Listing
September 2016

Ebola virus disease diagnosis by real-time RT-PCR: A comparative study of 11 different procedures.

J Clin Virol 2016 Apr 2;77:9-14. Epub 2016 Feb 2.

Swiss National Reference Centre for Emerging Viral Diseases, Geneva University Hospitals, Geneva, Switzerland; Laboratory of Virology, Geneva University Hospitals, Geneva, Switzerland; University of Geneva Medical School, Geneva, Switzerland.

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http://dx.doi.org/10.1016/j.jcv.2016.01.017DOI Listing
April 2016

Clinical features and viral kinetics in a rapidly cured patient with Ebola virus disease: a case report.

Lancet Infect Dis 2015 Sep 19;15(9):1034-1040. Epub 2015 Jul 19.

Division of Infectious Diseases, Geneva University Hospitals, Geneva, Switzerland; Laboratory of Virology and Swiss Reference Centre for Emerging Viral Diseases, Geneva University Hospitals, Geneva, Switzerland; University of Geneva Medical School, Geneva, Switzerland.

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http://dx.doi.org/10.1016/S1473-3099(15)00229-7DOI Listing
September 2015

Comprehensive human virus screening using high-throughput sequencing with a user-friendly representation of bioinformatics analysis: a pilot study.

J Clin Microbiol 2014 Sep 9;52(9):3351-61. Epub 2014 Jul 9.

Division of Infectious Diseases, Laboratory of Virology and Division of Laboratory Medicine, University Hospitals of Geneva, Geneva, Switzerland Department of Medicine, University of Geneva Medical School, Geneva, Switzerland.

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http://jcm.asm.org/lookup/doi/10.1128/JCM.01389-14
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http://dx.doi.org/10.1128/JCM.01389-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4313162PMC
September 2014

Identification of site-specific adaptations conferring increased neural cell tropism during human enterovirus 71 infection.

PLoS Pathog 2012 26;8(7):e1002826. Epub 2012 Jul 26.

Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University Hospitals of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.1371/journal.ppat.1002826DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3406088PMC
January 2013

Pilot Evaluation of RT-PCR/Electrospray Ionization Mass Spectrometry (PLEX-ID/Flu assay) on Influenza-Positive Specimens.

Open Virol J 2012 9;6:64-7. Epub 2012 May 9.

Swiss National Reference Centre for Emerging Viral Diseases, University of Geneva Hospitals, Geneva, Switzerland.

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http://dx.doi.org/10.2174/1874357901206010064DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3355350PMC
August 2012

Rhinovirus genome variation during chronic upper and lower respiratory tract infections.

PLoS One 2011 21;6(6):e21163. Epub 2011 Jun 21.

Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0021163PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3119694PMC
November 2011

Analytical validation of a lymphocytic choriomeningitis virus real-time RT-PCR assay.

J Virol Methods 2011 Oct 6;177(1):118-22. Epub 2011 Jul 6.

Swiss National Reference Centre for Emerging Viral Diseases, University of Geneva Hospitals, Geneva, Switzerland.

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http://dx.doi.org/10.1016/j.jviromet.2011.06.018DOI Listing
October 2011

Rhinovirus genome evolution during experimental human infection.

PLoS One 2010 May 11;5(5):e10588. Epub 2010 May 11.

Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0010588PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2868056PMC
May 2010

Simultaneous detection of parainfluenza viruses 1 and 3 by real-time reverse transcription-polymerase chain reaction.

J Virol Methods 2009 Mar 24;156(1-2):166-8. Epub 2008 Dec 24.

Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 24 Rue Micheli-du-Crest, 1211 Geneva 14, Switzerland.

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http://dx.doi.org/10.1016/j.jviromet.2008.11.006DOI Listing
March 2009

The cis-acting replication elements define human enterovirus and rhinovirus species.

RNA 2008 Aug 9;14(8):1568-78. Epub 2008 Jun 9.

Central Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 1211 Geneva 14, Switzerland.

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http://dx.doi.org/10.1261/rna.1031408DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2491478PMC
August 2008

New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features.

BMC Genomics 2007 Jul 10;8:224. Epub 2007 Jul 10.

Central Laboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, Geneva, Switzerland.

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http://dx.doi.org/10.1186/1471-2164-8-224DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1949831PMC
July 2007

Further characterization of a paramyxovirus transcription initiation signal: search for required nucleotides upstream and importance of the N phase context.

J Gen Virol 2007 May;88(Pt 5):1555-64

Department of Microbiology and Molecular Medicine, University of Geneva Medical School, CMU, 1 rue Michel-Servet, CH-1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1099/vir.0.82701-0DOI Listing
May 2007

Transcribing paramyxovirus RNA polymerase engages the template at its 3' extremity.

J Gen Virol 2006 Mar;87(Pt 3):665-72

Department of Microbiology and Molecular Medicine, University of Geneva Medical School, CMU, 1 rue Michel-Servet, CH-1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1099/vir.0.81353-0DOI Listing
March 2006

Nature of a paramyxovirus replication promoter influences a nearby transcription signal.

J Gen Virol 2005 Jan;86(Pt 1):171-80

Department of Microbiology and Molecular Medicine, University of Geneva Medical School, CMU, 1 rue Michel-Servet, CH-1211 Geneva 4, Switzerland.

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http://dx.doi.org/10.1099/vir.0.80435-0DOI Listing
January 2005