Publications by authors named "Sam Aparicio"

13Publications

ReMixT: clone-specific genomic structure estimation in cancer.

Genome Biol 2017 07 27;18(1):140. Epub 2017 Jul 27.

Department of Molecular Oncology, BC Cancer Agency, 675 West 10th Avenue, Vancouver, BC, Canada.

View Article and Find Full Text PDF
July 2017

The shaping and functional consequences of the microRNA landscape in breast cancer.

Nature 2013 May 5;497(7449):378-82. Epub 2013 May 5.

Cancer Research UK Cambridge Institute and Department of Oncology, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK.

View Article and Find Full Text PDF
May 2013

iReckon: simultaneous isoform discovery and abundance estimation from RNA-seq data.

Genome Res 2013 Mar 29;23(3):519-29. Epub 2012 Nov 29.

Department of Computer Science, University of Toronto, Ontario M5S 2E4, Canada.

View Article and Find Full Text PDF
March 2013

SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors.

Bioinformatics 2010 Mar 3;26(6):730-6. Epub 2010 Feb 3.

Department of Molecular Oncology Breast Cancer Research Program, British Columbia Cancer Research Centre, Vancouver, BC, Canada.

View Article and Find Full Text PDF
March 2010

A consensus prognostic gene expression classifier for ER positive breast cancer.

Genome Biol 2006 31;7(10):R101. Epub 2006 Oct 31.

Cancer Genomics Program, Department of Oncology, University of Cambridge, Hutchison/MRC Research Center, Hills Road, Cambridge CB2 2XZ, UK.

View Article and Find Full Text PDF
March 2007