Publications by authors named "Saima Rathore"

26Publications

Brain extraction on MRI scans in presence of diffuse glioma: Multi-institutional performance evaluation of deep learning methods and robust modality-agnostic training.

Neuroimage 2020 Oct 27;220:117081. Epub 2020 Jun 27.

Center for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, PA, USA; Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.neuroimage.2020.117081DOI Listing
October 2020

Overall survival prediction in glioblastoma patients using structural magnetic resonance imaging (MRI): advanced radiomic features may compensate for lack of advanced MRI modalities.

J Med Imaging (Bellingham) 2020 May 9;7(3):031505. Epub 2020 Jun 9.

University of Pennsylvania, Perelman School of Medicine, Center for Biomedical Image Computing and Analytics, Richards Medical Research Laboratories, Philadelphia, PA, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1117/1.JMI.7.3.031505DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7282509PMC
May 2020

Glioma Grading via Analysis of Digital Pathology Images Using Machine Learning.

Cancers (Basel) 2020 Mar 2;12(3). Epub 2020 Mar 2.

Lady Davis Institute for Medical Research, McGill University, Montreal, QC H3S 1Y9, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3390/cancers12030578DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7139732PMC
March 2020

Multivariate Analysis of Preoperative Magnetic Resonance Imaging Reveals Transcriptomic Classification of Glioblastoma Patients.

Front Comput Neurosci 2019 12;13:81. Epub 2019 Dec 12.

Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fncom.2019.00081DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6923885PMC
December 2019

Segmentation and Grade Prediction of Colon Cancer Digital Pathology Images Across Multiple Institutions.

Cancers (Basel) 2019 Nov 1;11(11). Epub 2019 Nov 1.

Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA 19104, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3390/cancers11111700DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6896042PMC
November 2019

Precision diagnostics based on machine learning-derived imaging signatures.

Magn Reson Imaging 2019 12 6;64:49-61. Epub 2019 May 6.

Center for Biomedical Image Computing and Analytics, University of Pennsylvania, United States of America.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.mri.2019.04.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6832825PMC
December 2019

Epidermal Growth Factor Receptor Extracellular Domain Mutations in Glioblastoma Present Opportunities for Clinical Imaging and Therapeutic Development.

Cancer Cell 2018 07;34(1):163-177.e7

Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Abramson Cancer Center, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.ccell.2018.06.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6424337PMC
July 2018

Brain Cancer Imaging Phenomics Toolkit (brain-CaPTk): An Interactive Platform for Quantitative Analysis of Glioblastoma.

Brainlesion 2018 17;10670:133-145. Epub 2018 Feb 17.

Department of Radiology, Perelman School of Medicine, Center for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, PA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-3-319-75238-9_12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5934754PMC
February 2018

Radiomic signature of infiltration in peritumoral edema predicts subsequent recurrence in glioblastoma: implications for personalized radiotherapy planning.

J Med Imaging (Bellingham) 2018 Apr 1;5(2):021219. Epub 2018 Mar 1.

University of Pennsylvania, Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, Philadelphia, Pennsylvania, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1117/1.JMI.5.2.021219DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5831697PMC
April 2018

Prostate cancer detection using machine learning techniques by employing combination of features extracting strategies.

Cancer Biomark 2018 Feb;21(2):393-413

Department of CS and IT, The University of Azad Jammu and Kashmir, Muzaffarabad, Azad Kashmir, Pakistan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3233/CBM-170643DOI Listing
February 2018

Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework.

Brainlesion 2016 10 12;10154:184-194. Epub 2017 Apr 12.

Section of Biomedical Image Analysis, Perelman School of Medicine, Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-3-319-55524-9_18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5512606PMC
October 2016

Detection of EGFRvIII in Glioblastoma via Perfusion Magnetic Resonance Imaging Signature Consistent with Deep Peritumoral Infiltration: The -Index.

Clin Cancer Res 2017 Aug 20;23(16):4724-4734. Epub 2017 Apr 20.

Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1078-0432.CCR-16-1871DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5559313PMC
August 2017

A review on neuroimaging-based classification studies and associated feature extraction methods for Alzheimer's disease and its prodromal stages.

Neuroimage 2017 07 13;155:530-548. Epub 2017 Apr 13.

Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.neuroimage.2017.03.057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5511557PMC
July 2017

GECC: Gene Expression Based Ensemble Classification of Colon Samples.

IEEE/ACM Trans Comput Biol Bioinform 2014 Nov-Dec;11(6):1131-45

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1109/TCBB.2014.2344655DOI Listing
March 2016

Novel structural descriptors for automated colon cancer detection and grading.

Comput Methods Programs Biomed 2015 Sep 6;121(2):92-108. Epub 2015 Jun 6.

DCIS, Pakistan Institute of Engineering and Applied Sciences, Islamabad, Pakistan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cmpb.2015.05.008DOI Listing
September 2015

Automated colon cancer detection using hybrid of novel geometric features and some traditional features.

Comput Biol Med 2015 Oct 16;65:279-96. Epub 2015 Mar 16.

DCIS, Pakistan Institute of Engineering and Applied Sciences, Islamabad, Pakistan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.compbiomed.2015.03.004DOI Listing
October 2015

Ensemble classification of colon biopsy images based on information rich hybrid features.

Comput Biol Med 2014 Apr 8;47:76-92. Epub 2014 Jan 8.

Department of Computer & Information Sciences, PIEAS, Pakistan Institute of Engineering and Applied Sciences, P.O. Nilore, Islamabad.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.compbiomed.2013.12.010DOI Listing
April 2014

A recent survey on colon cancer detection techniques.

IEEE/ACM Trans Comput Biol Bioinform 2013 May-Jun;10(3):545-63

DCIS, Pakistan Institute of Engineering and Applied Sciences, Nilore, Islamabad and University of Azad Jammu and Kashmir, Muzaffarabad, Azad Kashmir.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1109/TCBB.2013.84DOI Listing
July 2015