Publications by authors named "Sabine Yerly"

100Publications

The rate of mother-to-child transmission of antiretroviral drug-resistant HIV strains is low in the Swiss Mother and Child HIV Cohort Study.

Swiss Med Wkly 2019 Mar 4;149:w20059. Epub 2019 Apr 4.

Transplantation and Clinical Virology, Department of Biomedicine, University of Basel, Switzerland / Clinical Virology, Laboratory Medicine, University Hospital Basel, Switzerland / Infectious Diseases and Hospital Epidemiology, University Hospital Basel, and University of Basel, Switzerland.

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http://dx.doi.org/10.4414/smw.2019.20059DOI Listing
March 2019

Comparison of analytical performances of the Roche Cobas 6800 CT/NG assay with the Abbott m2000 Real Time CT/NG assay for detecting Chlamydia trachomatis and Neisseria gonorrhoeae.

J Med Microbiol 2019 Feb 3;68(2):197-200. Epub 2019 Jan 3.

1​Bacteriology Laboratory, Division of Laboratory Medicine, Department of Genetics, Laboratory Medicine and Pathology, Geneva University Hospitals, 4 rue Gabrielle-Perret-Gentil, 1205 Geneva, Switzerland.

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http://dx.doi.org/10.1099/jmm.0.000909DOI Listing
February 2019

A community outbreak of Legionnaires' disease in Geneva, Switzerland, June to September 2017.

Swiss Med Wkly 2018 11 2;148:w14687. Epub 2018 Dec 2.

Laboratory of Virology, Division of Laboratory Medicine and Division of Infectious Diseases, University of Geneva Hospitals, Switzerland; University of Geneva Medical School, Switzerland.

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http://dx.doi.org/10.4414/smw.2018.14687DOI Listing
November 2018

Time to overcome pretreatment HIV drug resistance.

Lancet Infect Dis 2018 03 30;18(3):239-240. Epub 2017 Nov 30.

Laboratory of Virology, AIDS Unit, Division of Infectious Diseases, Geneva University Hospitals and Faculty of Medicine, Geneva 1211, Switzerland.

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http://dx.doi.org/10.1016/S1473-3099(17)30709-0DOI Listing
March 2018

Large-scale inference of conjunctive Bayesian networks.

Bioinformatics 2016 09;32(17):i727-i735

Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland SIB Swiss Institute of Bioinformatics, Basel, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btw459DOI Listing
September 2016

Successful Prevention of Transmission of Integrase Resistance in the Swiss HIV Cohort Study.

J Infect Dis 2016 08 29;214(3):399-402. Epub 2016 Apr 29.

Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, Institute of Medical Virology, University of Zurich.

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http://dx.doi.org/10.1093/infdis/jiw165DOI Listing
August 2016

In Vivo Profiling and Distribution of Known and Novel Phase I and Phase II Metabolites of Efavirenz in Plasma, Urine, and Cerebrospinal Fluid.

Drug Metab Dispos 2016 Jan 9;44(1):151-61. Epub 2015 Nov 9.

Laboratory of Clinical Pharmacology, Service of Biomedicine (M.A., B.T., M.R., L.A.D.), Division of Clinical Pharmacology, Service of Biomedicine (M.A., C.B., T.B.), Service of Infectious Diseases (B.T., M.C.), Institute of Microbiology (A.T., M.R.), and Innovation and Development, Service of Biomedicine (H.H.), University Hospital and University of Lausanne, Lausanne, Switzerland; Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zürich, University of Zürich, Zürich, Switzerland (A.A., H.F.G.); Institute of Medical Virology, University of Zurich, Zurich, Switzerland (H.F.G.); Division of Infectious Diseases, Cantonal Hospital, St. Gallen, Switzerland (P.V.); Laboratory of Virology, University Hospital of Geneva, Geneva, Switzerland (S.Y.); and The J. Craig Venter Institute, La Jolla, California (A.T.)

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http://dx.doi.org/10.1124/dmd.115.065839DOI Listing
January 2016

Assessing efficacy of different nucleos(t)ide backbones in NNRTI-containing regimens in the Swiss HIV Cohort Study.

J Antimicrob Chemother 2015 Dec 11;70(12):3323-31. Epub 2015 Sep 11.

Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland Institute of Medical Virology, University of Zurich, Zurich, Switzerland

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http://dx.doi.org/10.1093/jac/dkv257DOI Listing
December 2015

Clinical features and viral kinetics in a rapidly cured patient with Ebola virus disease: a case report.

Lancet Infect Dis 2015 Sep 19;15(9):1034-1040. Epub 2015 Jul 19.

Division of Infectious Diseases, Geneva University Hospitals, Geneva, Switzerland; Laboratory of Virology and Swiss Reference Centre for Emerging Viral Diseases, Geneva University Hospitals, Geneva, Switzerland; University of Geneva Medical School, Geneva, Switzerland.

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http://dx.doi.org/10.1016/S1473-3099(15)00229-7DOI Listing
September 2015

Phase 1 Trials of rVSV Ebola Vaccine in Africa and Europe.

N Engl J Med 2016 Apr 1;374(17):1647-60. Epub 2015 Apr 1.

From the Centre de Recherches Médicales de Lambaréné, Lambaréné, Gabon (S.T.A., J.F.F., A.A.A., E.B.B., J.S.B., M.P.G., A.L.K., B. Lell, M.M.-L., B.M., M.R., S.K., P.G.K.); Institut für Tropenmedizin, Universitätsklinikum Tübingen, and German Center for Infection Research, Tübingen (S.T.A., J.F.F., A.A.A., E.B.B., J.S.B., M.P.G., A.L.K., B. Lell, M.M.-L., B.M., M.R., S.K., P.G.K.), University Medical Center Hamburg-Eppendorf, 1st Department of Medicine (M.E.Z., C.D., R.K., A.W.L., A.N., S.S., H.C.S., M.M.A.), and Institute for Clinical Chemistry and Laboratory Medicine (F.R.S.), German Center for Infection Research, partner site Standort Hamburg-Lübeck-Borstel (C.D., A.N., J.S.-C., H.C.S., M.M.A.), Heinrich-Pette-Institute, Leibniz Institute for Experimental Virology (M.A.), Clinical Trial Center North (S. Borregaard, A.J.), and Bernhard Nocht Institute for Tropical Medicine, World Health Organization (WHO) Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, National Reference Center for Tropical Infectious Diseases (J.S.-C.), Hamburg, Philipps University Marburg, Institute for Virology, and the German Center for Infection Research (DZIF), partner site Giessen-Marburg-Langen, Marburg (V.K., N.B., M.E., S.K.F., T.S., S. Becker), and the Division of Veterinary Medicine, Paul Ehrlich Institute, Langen (R.K.) - all in Germany; the Infection Control Program (A.H.), Divisions of Infectious Diseases (A.H., J.-A.D., L.K.), Clinical Epidemiology (C.C.), Rheumatology (A.F.), and Dermatology (G.K.), and Centers for Clinical Research (J.D., A.M.) and Vaccinology (C.-A.S.), Geneva University Hospitals and Faculty of Medicine, the Virology Laboratory, Geneva University Hospitals (S.Y., A.R.G., L.K.), WHO Collaborative Center for Vaccinology, Faculty of Medicine (F.A., B. Lemaître, C.-A.S.), and the WHO (P.F., V.M., M.-P.K.) - all in Geneva; the Kenya Medical Research Institute-Wellcome Trust Research Program, Center for Geographic Medicine

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http://dx.doi.org/10.1056/NEJMoa1502924DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5490784PMC
April 2016

Persistence of transmitted HIV-1 drug resistance mutations associated with fitness costs and viral genetic backgrounds.

PLoS Pathog 2015 Mar 23;11(3):e1004722. Epub 2015 Mar 23.

Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland; Institute of Medical Virology, University of Zurich, Zurich, Switzerland.

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http://dx.doi.org/10.1371/journal.ppat.1004722DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4370492PMC
March 2015

Viral escape in the CNS with multidrug-resistant HIV-1.

J Int AIDS Soc 2014 2;17(4 Suppl 3):19745. Epub 2014 Nov 2.

Department of Infectious Diseases, University Hospital and University of Bern, Bern, Switzerland.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4225423PMC
http://dx.doi.org/10.7448/IAS.17.4.19745DOI Listing
January 2016

Antiretroviral-naive and -treated HIV-1 patients can harbour more resistant viruses in CSF than in plasma.

J Antimicrob Chemother 2015 Feb 25;70(2):566-72. Epub 2014 Oct 25.

Sorbonne Universités, UPMC Université de Paris, 06-UMR_S 1136 Pierre Louis Institute of Epidemiology and Public Health, F-75005 Paris, France INSERM-UMR_S 1136 Pierre Louis Institute of Epidemiology and Public Health, F-75013 Paris, France AP-HP, Groupe hospitalier Pitié Salpêtrière, Laboratoire de Virologie, F-75013 Paris, France.

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http://dx.doi.org/10.1093/jac/dku419DOI Listing
February 2015

Limited clinical benefit of minority K103N and Y181C-variant detection in addition to routine genotypic resistance testing in antiretroviral therapy-naive patients.

AIDS 2014 Sep;28(15):2231-9

aDivision of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich bInstitute of Medical Virology, Swiss National Center for Retroviruses, University of Zurich, Zurich cLaboratory of Virology and AIDS Center, University Hospital Geneva, Geneva dDepartment of Biomedicine, Haus Petersplatz, University of Basel, Basel eDivision of Immunology, University Hospital Lausanne, Lausanne fDepartment of Infectious Diseases, Bern University Hospital and University of Bern, Bern gDivision of Infectious Diseases and Hospital Epidemiology, University Hospital Basel, University of Basel, Basel hDivision of Infectious Diseases, Cantonal Hospital St. Gallen, St. Gallen iInfectious Diseases Service, University Hospital Lausanne, Lausanne jDivision of Infectious Diseases, Geneva University Hospitals, Geneva kDivision of Infectious Diseases, Regional Hospital Lugano, Lugano, Switzerland. *Karin J. Metzner, Alexandra U. Scherrer and Viktor Von Wyl contributed equally to this work.

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http://dx.doi.org/10.1097/QAD.0000000000000397DOI Listing
September 2014

Clustering of HCV coinfections on HIV phylogeny indicates domestic and sexual transmission of HCV.

Int J Epidemiol 2014 Jun 22;43(3):887-96. Epub 2014 Jan 22.

Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Zurich, Switzerland, Department of Infectious Diseases, Bern University Hospital and University of Bern, Bern, Switzerland, Institute of Medical Virology, University of Zurich, Zurich, Switzerland, Laboratory of Virology, University Hospital Geneva, Geneva, Switzerland, Division of Immunology and Allergy, University Hospital Lausanne, University of Lausanne, Lausanne, Switzerland, Department Biomedicine, University of Basel, Basel, Switzerland, Division of Infectious Diseases, Geneva University Hospital, Geneva, Division of Immunology, University Hospital Lausanne, Lausanne, Switzerland, Division of Infectious Diseases and Hospital Epidemiology, University Hospital Basel, Basel, Division of Infectious Diseases, Cantonal Hospital St Gallen, St Gallen, Switzerland and Division of Infectious Diseases, Regional Hospital Lugano, Lugano, Switzerland.

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http://dx.doi.org/10.1093/ije/dyt276DOI Listing
June 2014

A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control.

Elife 2013 Oct 29;2:e01123. Epub 2013 Oct 29.

School of Life Sciences , École Polytechnique Fédérale de Lausanne , Lausanne , Switzerland ; Institute of Microbiology , University Hospital and University of Lausanne , Lausanne , Switzerland ; Research Group of Theoretical Biology and Evolutionary Ecology , Eötvös Loránd University and the Hungarian Academy of Sciences , Budapest , Hungary ; Swiss Institute of Bioinformatics , Lausanne , Switzerland.

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http://dx.doi.org/10.7554/eLife.01123DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3807812PMC
October 2013

Marked increase of the astrocytic marker S100B in the cerebrospinal fluid of HIV-infected patients on LPV/r-monotherapy.

AIDS 2013 Jan;27(2):203-10

Unit of Neuroimmunology, Division of Neurology and Division of Immunology, Department of Clinical Neurosciences and Department of Medicine, University Hospital of Lausanne, University of Lausanne, Lausanne 1011, Switzerland.

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https://insights.ovid.com/crossref?an=00002030-201301140-000
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http://dx.doi.org/10.1097/QAD.0b013e32835a9a4aDOI Listing
January 2013

Critical analysis of rhinovirus RNA load quantification by real-time reverse transcription-PCR.

J Clin Microbiol 2012 Sep 20;50(9):2868-72. Epub 2012 Jun 20.

Laboratory of Virology, Division of Infectious Diseases and Division of Laboratory Medicine, University of Geneva Hospitals, Geneva, Switzerland.

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http://dx.doi.org/10.1128/JCM.06752-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3421824PMC
September 2012

Diagnosing acute HIV infection.

Expert Rev Anti Infect Ther 2012 Jan;10(1):31-41

Laboratory of Virology, Division of Laboratory Medicine, Department of Genetic and Laboratory Medicine, Switzerland.

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http://www.tandfonline.com/doi/full/10.1586/eri.11.154
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http://dx.doi.org/10.1586/eri.11.154DOI Listing
January 2012

Incidence of HIV-1 drug resistance among antiretroviral treatment-naive individuals starting modern therapy combinations.

Clin Infect Dis 2012 Jan 4;54(1):131-40. Epub 2011 Nov 4.

Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Switzerland.

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http://dx.doi.org/10.1093/cid/cir728DOI Listing
January 2012

Estimating the basic reproductive number from viral sequence data.

Mol Biol Evol 2012 Jan 2;29(1):347-57. Epub 2011 Sep 2.

Institute of Integrative Biology, Eidgenössische Technische Hochschule (ETH) Zürich, Zürich, Switzerland.

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http://dx.doi.org/10.1093/molbev/msr217DOI Listing
January 2012

HIV-1 drug resistance transmission networks in southwest Switzerland.

AIDS Res Hum Retroviruses 2010 Nov 23;26(11):1233-8. Epub 2010 Sep 23.

Service of Immunology and Allergy, Centre Hospitalier Universitaire Vaudois, Switzerland.

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http://dx.doi.org/10.1089/aid.2010.0083DOI Listing
November 2010

Unusual primary HIV infection with colonic ulcer complicated by hemorrhagic shock: a case report.

J Med Case Rep 2010 Aug 20;4:279. Epub 2010 Aug 20.

Department of Internal Medicine, University Hospitals Geneva, Rue Gabrielle-Perret-Gentil 4, Geneva, 1211, Switzerland.

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http://jmedicalcasereports.biomedcentral.com/articles/10.118
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http://dx.doi.org/10.1186/1752-1947-4-279DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2933633PMC
August 2010

HIV-1 elite controllers: beware of super-infections.

J Clin Virol 2010 Apr 13;47(4):376-8. Epub 2010 Feb 13.

Infectious Diseases Service, Centre Hospitalier Universitaire Vaudois and University of Lausanne, Lausanne 1011, Switzerland.

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http://linkinghub.elsevier.com/retrieve/pii/S138665321000022
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http://dx.doi.org/10.1016/j.jcv.2010.01.013DOI Listing
April 2010

Cohort profile: the Swiss HIV Cohort study.

Int J Epidemiol 2010 Oct 30;39(5):1179-89. Epub 2009 Nov 30.

Data- and Coordination Center, University Hospital Center and University of Lausanne, Av. Pierre-Decker 2, 1011 Lausanne-CHUV, Switzerland.

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http://dx.doi.org/10.1093/ije/dyp321DOI Listing
October 2010