Sabah Kadri

Sabah Kadri

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Sabah Kadri

Sabah Kadri

Publications by authors named "Sabah Kadri"

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36Publications

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Cribriform-Morular Variant of Papillary Thyroid Carcinoma With Poorly Differentiated Features: A Case Report With Immunohistochemical and Molecular Genetic Analysis.

Int J Surg Pathol 2019 May 3;27(3):294-304. Epub 2018 Sep 3.

1 Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT, USA.

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http://dx.doi.org/10.1177/1066896918796946DOI Listing
May 2019

insiM: in silico Mutator Software for Bioinformatics Pipeline Validation of Clinical Next-Generation Sequencing Assays.

J Mol Diagn 2019 Jan 29;21(1):19-26. Epub 2018 Sep 29.

Division of Genomic and Molecular Pathology, The University of Chicago, Chicago, Illinois. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S15251578183010
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http://dx.doi.org/10.1016/j.jmoldx.2018.08.001DOI Listing
January 2019

Frequency of Germline Mutations in Cancer Susceptibility Genes in Malignant Mesothelioma.

J Clin Oncol 2018 10 16;36(28):2863-2871. Epub 2018 Aug 16.

Vasiliki Panou and Oluf D. Røe, Aalborg University Hospital, Aalborg, Denmark; Meghana Gadiraju, Arthur Wolin, Caroline M. Weipert, Emily Skarda, Aliya N. Husain, Jyoti D. Patel, Buerkley Rose, Shannon R. Zhang, Madison Weatherly, Viswateja Nelakuditi, Amy Knight Johnson, Maria Helgeson, David Fischer, Arpita Desai, Nanna Sulai, Lauren Ritterhouse, Kiran K. Turaga, Dezheng Huo, Jeremy Segal, Sabah Kadri, Zejuan Li, Hedy L. Kindler, and Jane E. Churpek, The University of Chicago, Chicago, IL; Oluf D. Røe, Levanger Hospital, Nord-Trøndelag Hospital Trust, Levanger; and Oluf D. Røe, Norwegian University of Science and Technology, Trondheim, Norway.

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http://ascopubs.org/doi/10.1200/JCO.2018.78.5204
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http://dx.doi.org/10.1200/JCO.2018.78.5204DOI Listing
October 2018

Noninvasive Follicular Thyroid Neoplasms With Papillary-like Nuclear Features Are Genetically and Biologically Similar to Adenomatous Nodules and Distinct From Papillary Thyroid Carcinomas With Extensive Follicular Growth.

Arch Pathol Lab Med 2018 07 27;142(7):838-850. Epub 2018 Mar 27.

From the Divisions of Anatomic Pathology (Drs Johnson, Antic, and Cipriani) and Molecular Pathology (Messrs Long, Zhen, and Mujacic; Ms Wurst; and Drs Kadri and Segal), Department of Pathology, University of Chicago, Chicago, Illinois; and the ARUP Laboratories, University of Utah, Salt Lake City (Dr Furtado).

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http://dx.doi.org/10.5858/arpa.2017-0118-OADOI Listing
July 2018

Synchronous and Metastatic Papillary and Follicular Thyroid Carcinomas with Unique Molecular Signatures.

Endocr Pathol 2018 Mar;29(1):9-14

Department of Pathology, The University of Chicago Medical Center, 5841 South Maryland Ave, Chicago, IL, 60637, USA.

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http://dx.doi.org/10.1007/s12022-017-9491-6DOI Listing
March 2018

Defining the 5΄ and 3΄ landscape of the Drosophila transcriptome with Exo-seq and RNaseH-seq.

Nucleic Acids Res 2017 Jun;45(11):e95

Biological Chemistry Department, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem 91904, Israel.

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http://dx.doi.org/10.1093/nar/gkx133DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5499799PMC
June 2017

Melanotic PEComa of the Sinonasal Mucosa With NONO-TFE3 Fusion: An Elusive Mimic of Sinonasal Melanoma.

Am J Surg Pathol 2017 May;41(5):717-722

*Department of Pathology, University of Chicago Medicine §Chicago Otolaryngology Associates, Chicago ‡Dermatopathology, Midwest Diagnostic Pathology, Park Ridge, IL †Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI ∥Department of Pathology/Microbiology, Pediatrics, and Orthopaedic Surgery, 983135 Nebraska Medical Center, University of Nebraska, Omaha, NE.

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http://dx.doi.org/10.1097/PAS.0000000000000778DOI Listing
May 2017

Unclassified renal cell carcinoma with tubulopapillary architecture, clear cell phenotype, and chromosome 8 monosomy: a new kid on the block.

Virchows Arch 2016 Jul 12;469(1):81-91. Epub 2016 May 12.

Department of Pathology, The University of Chicago, 5841 S. Maryland Avenue, Chicago, IL, 60637, USA.

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http://dx.doi.org/10.1007/s00428-016-1952-7DOI Listing
July 2016

Polyglucosan bodies in intramuscular nerve branches are a poor predictor of GBE1 mutation and adult polyglucosan body disease.

Muscle Nerve 2016 Mar;53(3):473-5

Department of Pathology, University of Chicago Medical Center, Room E-608, MC6101, 5841 South Maryland Avenue, Chicago, Illinois, 60637, USA.

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http://dx.doi.org/10.1002/mus.25017DOI Listing
March 2016

Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs.

Genome Biol 2016 Feb 2;17:19. Epub 2016 Feb 2.

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, 01655, USA.

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http://genomebiology.com/2016/17/1/19
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http://dx.doi.org/10.1186/s13059-016-0880-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4739325PMC
February 2016

Amplicon Indel Hunter Is a Novel Bioinformatics Tool to Detect Large Somatic Insertion/Deletion Mutations in Amplicon-Based Next-Generation Sequencing Data.

J Mol Diagn 2015 Nov 28;17(6):635-43. Epub 2015 Aug 28.

Division of Genomic and Molecular Pathology, Department of Pathology, The University of Chicago, Chicago, Illinois. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2015.06.005DOI Listing
November 2015

Reconstructing and reprogramming the tumor-propagating potential of glioblastoma stem-like cells.

Cell 2014 Apr 10;157(3):580-94. Epub 2014 Apr 10.

Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA; Department of Pathology and Center for Cancer Research, Massachusetts General Hospital and Harvard Medical School, Boston, MA 02114, USA; Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2014.02.030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4004670PMC
April 2014

RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star.

PLoS One 2011 28;6(12):e29217. Epub 2011 Dec 28.

Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0029217PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3247247PMC
May 2012

HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models.

BMC Bioinformatics 2009 Jan 30;10 Suppl 1:S35. Epub 2009 Jan 30.

Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

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http://dx.doi.org/10.1186/1471-2105-10-S1-S35DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648761PMC
January 2009