Saad Raza

Saad Raza

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Saad Raza

Saad Raza

Publications by authors named "Saad Raza"

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11Publications

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Visualizing protein-ligand binding with chemical energy-wise decomposition (CHEWD): application to ligand binding in the kallikrein-8 S1 Site.

J Comput Aided Mol Des 2019 May 15;33(5):461-475. Epub 2019 Apr 15.

Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University Islamabad, Islamabad, 45320, Pakistan.

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http://link.springer.com/10.1007/s10822-019-00200-4
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http://dx.doi.org/10.1007/s10822-019-00200-4DOI Listing
May 2019

Screening pipeline for Flavivirus based Inhibitors for Zika Virus NS1.

IEEE/ACM Trans Comput Biol Bioinform 2019 Apr 15. Epub 2019 Apr 15.

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http://dx.doi.org/10.1109/TCBB.2019.2911081DOI Listing
April 2019

Toward novel inhibitors against KdsB: a highly specific and selective broad-spectrum bacterial enzyme.

J Biomol Struct Dyn 2019 Mar 18;37(5):1326-1345. Epub 2018 Apr 18.

a Computational Biology Lab, National Center for Bioinformatics , Quaid-i-Azam University , Islamabad 45320 , Pakistan.

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http://dx.doi.org/10.1080/07391102.2018.1459318DOI Listing
March 2019

Moleculer dynamics simulaiton revealed reciever domain of Acinetobacter baumannii BfmR enzyme as the hot spot for future antibiotics designing.

J Biomol Struct Dyn 2018 Oct 22:1-16. Epub 2018 Oct 22.

a Computational Biology Lab, National Center for Bioinformatics , Quaid-i-Azam University , Islamabad , Pakistan.

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http://dx.doi.org/10.1080/07391102.2018.1498805DOI Listing
October 2018

Comparative subtractive proteomics based ranking for antibiotic targets against the dirtiest superbug: Acinetobacter baumannii.

J Mol Graph Model 2018 Jun 21;82:74-92. Epub 2018 Apr 21.

Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, 45320, Pakistan. Electronic address:

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http://dx.doi.org/10.1016/j.jmgm.2018.04.005DOI Listing
June 2018

Improvement in thermostability of xylanase from Geobacillus thermodenitrificans C5 by site directed mutagenesis.

Enzyme Microb Technol 2018 Apr 6;111:38-47. Epub 2018 Jan 6.

Department of Microbiology, Faculty of Biological Sciences, Quaid-I-Azam University, Islamabad, Pakistan. Electronic address:

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http://dx.doi.org/10.1016/j.enzmictec.2018.01.004DOI Listing
April 2018

AFD: an application for bi-molecular interaction using axial frequency distribution.

J Mol Model 2018 Mar 6;24(4):84. Epub 2018 Mar 6.

Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan.

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http://link.springer.com/10.1007/s00894-018-3601-3
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http://dx.doi.org/10.1007/s00894-018-3601-3DOI Listing
March 2018

Binding mode analysis, dynamic simulation and binding free energy calculations of the MurF ligase from Acinetobacter baumannii.

J Mol Graph Model 2017 10 5;77:72-85. Epub 2017 Aug 5.

Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad 45320, Pakistan. Electronic address:

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http://dx.doi.org/10.1016/j.jmgm.2017.07.024DOI Listing
October 2017

Molecular dynamics simulation studies of novel β-lactamase inhibitor.

J Mol Graph Model 2017 06 4;74:143-152. Epub 2017 Apr 4.

Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, 45320, Pakistan. Electronic address:

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http://dx.doi.org/10.1016/j.jmgm.2017.03.002DOI Listing
June 2017

Binding pattern analysis and structural insight into the inhibition mechanism of Sterol 24-C methyltransferase by docking and molecular dynamics approach.

J Biomol Struct Dyn 2015 11;33(12):2563-77. Epub 2015 Feb 11.

a National Center for Bioinformatics , Quaid-i-Azam University , Islamabad 45320 , Pakistan.

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http://dx.doi.org/10.1080/07391102.2014.1002423DOI Listing
October 2016

Structure and dynamics studies of sterol 24-C-methyltransferase with mechanism based inactivators for the disruption of ergosterol biosynthesis.

Mol Biol Rep 2014 Jul 27;41(7):4279-93. Epub 2014 Feb 27.

Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, 45320, Pakistan,

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http://dx.doi.org/10.1007/s11033-014-3299-yDOI Listing
July 2014