Ryohei Yasuda

Ryohei Yasuda

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Ryohei Yasuda

Publications by authors named "Ryohei Yasuda"

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A distinct talin2 structure directs isoform specificity in cell adhesion.

J Biol Chem 2020 Jun 30. Epub 2020 Jun 30.

The Scripps Research Institute, United States.

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http://dx.doi.org/10.1074/jbc.RA119.010789DOI Listing
June 2020

Use of Freeze-thawed Embryos for High-efficiency Production of Genetically Modified Mice.

J Vis Exp 2020 Apr 2(158). Epub 2020 Apr 2.

Max Planck Florida Institute for Neuroscience.

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http://dx.doi.org/10.3791/60808DOI Listing
April 2020

In Vivo Imaging of the Coupling between Neuronal and CREB Activity in the Mouse Brain.

Neuron 2020 03 26;105(5):799-812.e5. Epub 2019 Dec 26.

Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2019.11.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7144870PMC
March 2020

Fluorescent sensors for neuronal signaling.

Curr Opin Neurobiol 2020 Mar 20;63:31-41. Epub 2020 Mar 20.

Max Planck Florida Institute for Neuroscience, United States. Electronic address:

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http://dx.doi.org/10.1016/j.conb.2020.02.007DOI Listing
March 2020

Rac1 is a downstream effector of PKCα in structural synaptic plasticity.

Sci Rep 2020 02 4;10(1):1777. Epub 2020 Feb 4.

Neuronal Signal Transduction Group, Max Planck Florida Institute for Neuroscience, Jupiter, FL, USA.

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http://dx.doi.org/10.1038/s41598-020-58610-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7000694PMC
February 2020

Glycine receptor α4 subunit facilitates the early embryonic development in mice.

Reproduction 2020 01;159(1):41

Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA.

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http://dx.doi.org/10.1530/REP-19-0312DOI Listing
January 2020

Reciprocal Activation within a Kinase-Effector Complex Underlying Persistence of Structural LTP.

Neuron 2019 06 8;102(6):1199-1210.e6. Epub 2019 May 8.

Brain Science Institute, RIKEN, Wako, Saitama 351-0198, Japan; Department of Pharmacology, Kyoto University Graduate School of Medicine, Kyoto 606-8501, Japan; Brain and Body System Science Institute, Saitama University, Saitama 338-8570, Japan; School of Life Science, South China Normal University, Guangzhou 510631, China. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S08966273193034
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http://dx.doi.org/10.1016/j.neuron.2019.04.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6669903PMC
June 2019

Mechanisms of Ca/calmodulin-dependent kinase II activation in single dendritic spines.

Nat Commun 2019 06 25;10(1):2784. Epub 2019 Jun 25.

Neuronal Signal Transduction Group, Max Planck Florida Institute for Neuroscience, Jupiter, FL, 33458, USA.

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http://dx.doi.org/10.1038/s41467-019-10694-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6592955PMC
June 2019

Longitudinal Two-Photon Imaging of Dorsal Hippocampal CA1 in Live Mice.

J Vis Exp 2019 06 19(148). Epub 2019 Jun 19.

Dept. of Stress Neurobiology and Neurogenetics, Max Planck Institute of Psychiatry;

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http://dx.doi.org/10.3791/59598DOI Listing
June 2019

Somatostatin-Expressing Interneurons Enable and Maintain Learning-Dependent Sequential Activation of Pyramidal Neurons.

Neuron 2019 04 18;102(1):202-216.e7. Epub 2019 Feb 18.

Skirball Institute, Department of Neuroscience and Physiology, Department of Anesthesiology, New York University School of Medicine, New York, NY 10016, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2019.01.036DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6555419PMC
April 2019

An open-source tool for analysis and automatic identification of dendritic spines using machine learning.

PLoS One 2018 5;13(7):e0199589. Epub 2018 Jul 5.

Neuronal Signal Transduction, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0199589PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6033424PMC
December 2018

PAM forms an atypical SCF ubiquitin ligase complex that ubiquitinates and degrades NMNAT2.

J Biol Chem 2018 09 11;293(36):13897-13909. Epub 2018 Jul 11.

From the Department of Neuroscience, The Scripps Research Institute, Scripps Florida, Jupiter, Florida 33458 and

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http://dx.doi.org/10.1074/jbc.RA118.002176DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6130950PMC
September 2018

Plasticity of Spine Structure: Local Signaling, Translation and Cytoskeletal Reorganization.

Front Synaptic Neurosci 2018 29;10:29. Epub 2018 Aug 29.

Neuronal Signal Transduction, Max Planck Florida Institute for Neuroscience (MPFI), Jupiter, FL, United States.

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http://dx.doi.org/10.3389/fnsyn.2018.00029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6123351PMC
August 2018

GIT1 regulates synaptic structural plasticity underlying learning.

PLoS One 2018 19;13(3):e0194350. Epub 2018 Mar 19.

Department of Medicine, Duke University Medical Center, Durham, North Carolina, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0194350PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5858814PMC
June 2018

A Dendritic Guidance Receptor Complex Brings Together Distinct Actin Regulators to Drive Efficient F-Actin Assembly and Branching.

Dev Cell 2018 05;45(3):362-375.e3

Howard Hughes Medical Institute, Department of Biology, Stanford University, Stanford, CA 94305, USA; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China. Electronic address:

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http://dx.doi.org/10.1016/j.devcel.2018.04.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6292511PMC
May 2018

Biophysics of Biochemical Signaling in Dendritic Spines: Implications in Synaptic Plasticity.

Authors:
Ryohei Yasuda

Biophys J 2017 Nov 30;113(10):2152-2159. Epub 2017 Aug 30.

Max Planck Florida Institute for Neuroscience, Jupiter, Florida. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00063495173085
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http://dx.doi.org/10.1016/j.bpj.2017.07.029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5700242PMC
November 2017

Virus-Mediated Genome Editing via Homology-Directed Repair in Mitotic and Postmitotic Cells in Mammalian Brain.

Neuron 2017 Nov 19;96(4):755-768.e5. Epub 2017 Oct 19.

Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2017.10.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5691606PMC
November 2017

Automated Remote Focusing, Drift Correction, and Photostimulation to Evaluate Structural Plasticity in Dendritic Spines.

PLoS One 2017 23;12(1):e0170586. Epub 2017 Jan 23.

Neuronal Signal Transduction, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0170586PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5256890PMC
August 2017

Regulation of Rho GTPase proteins during spine structural plasticity for the control of local dendritic plasticity.

Curr Opin Neurobiol 2017 08 11;45:193-201. Epub 2017 Jul 11.

Max Planck Florida Institute for Neuroscience, 1 Max Planck Way, Jupiter, FL 33458, United States. Electronic address:

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http://dx.doi.org/10.1016/j.conb.2017.06.002DOI Listing
August 2017

High-speed atomic force microscopy imaging of live mammalian cells.

Biophys Physicobiol 2017 23;14:127-135. Epub 2017 Aug 23.

Max Planck Florida Institute for Neuroscience, Jupiter, Florida 33458, USA.

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http://dx.doi.org/10.2142/biophysico.14.0_127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5590786PMC
August 2017

Erratum: An optical probe of synaptic plasticity.

Nat Biotechnol 2017 05;35(5):481

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http://dx.doi.org/10.1038/nbt0517-481cDOI Listing
May 2017

CaMKII Autophosphorylation Is Necessary for Optimal Integration of Ca Signals during LTP Induction, but Not Maintenance.

Neuron 2017 May;94(4):800-808.e4

Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA; Department of Neurobiology, Duke University Medical Center, Durham, NC 27707, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2017.04.041DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5573161PMC
May 2017

Kinetics of Endogenous CaMKII Required for Synaptic Plasticity Revealed by Optogenetic Kinase Inhibitor.

Neuron 2017 Apr 16;94(1):37-47.e5. Epub 2017 Mar 16.

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710, USA; Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2017.02.036DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5425291PMC
April 2017

Imaging ERK and PKA Activation in Single Dendritic Spines during Structural Plasticity.

Neuron 2017 Mar 9;93(6):1315-1324.e3. Epub 2017 Mar 9.

Max Planck Florida Institute for Neuroscience, 1 Max Planck Way, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2017.02.032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6042854PMC
March 2017

Precise small-molecule recognition of a toxic CUG RNA repeat expansion.

Nat Chem Biol 2017 02 12;13(2):188-193. Epub 2016 Dec 12.

Departments of Chemistry and Neuroscience, The Scripps Research Institute, Jupiter, Florida, USA.

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http://dx.doi.org/10.1038/nchembio.2251DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5290590PMC
February 2017

Extracellular Remodeling by Lysosomes: An Inside-Out Mechanism of Spine Plasticity.

Neuron 2017 Jan;93(1):6-8

Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2016.12.025DOI Listing
January 2017

An optical probe of synaptic plasticity.

Nat Biotechnol 2017 01;35(1):26-27

Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA.

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http://dx.doi.org/10.1038/nbt.3767DOI Listing
January 2017

Simultaneous dual-color fluorescence lifetime imaging with novel red-shifted fluorescent proteins.

Nat Methods 2016 Dec 31;13(12):989-992. Epub 2016 Oct 31.

Neuronal Signal Transduction Group, Max Planck Florida Institute for Neuroscience, Jupiter, Florida, USA.

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http://dx.doi.org/10.1038/nmeth.4046DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5322478PMC
December 2016

NF1 Is a Direct G Protein Effector Essential for Opioid Signaling to Ras in the Striatum.

Curr Biol 2016 11 20;26(22):2992-3003. Epub 2016 Oct 20.

Department of Neuroscience, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2016.09.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5121064PMC
November 2016

Rho GTPase complementation underlies BDNF-dependent homo- and heterosynaptic plasticity.

Nature 2016 Oct 28;538(7623):104-108. Epub 2016 Sep 28.

Neurobiology Department, Duke University Medical Center, Research Drive, Durham, North Carolina 27710, USA.

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http://dx.doi.org/10.1038/nature19784DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5361895PMC
October 2016

Autocrine BDNF-TrkB signalling within a single dendritic spine.

Nature 2016 Oct 28;538(7623):99-103. Epub 2016 Sep 28.

Neurobiology Department, Duke University Medical Center, Research Drive, Durham, North Carolina 27710, USA.

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http://dx.doi.org/10.1038/nature19766DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5398094PMC
October 2016

High-Throughput, High-Resolution Mapping of Protein Localization in Mammalian Brain by In Vivo Genome Editing.

Cell 2016 Jun 12;165(7):1803-1817. Epub 2016 May 12.

Neuronal Signal Transduction Group, Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2016.04.044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912470PMC
June 2016

Biochemical Computation for Spine Structural Plasticity.

Neuron 2015 Jul;87(1):63-75

Max Planck Florida Institute for Neuroscience, One Max Planck Way, Jupiter, FL 33458, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2015.05.043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4722820PMC
July 2015

Long-tip high-speed atomic force microscopy for nanometer-scale imaging in live cells.

Sci Rep 2015 Mar 4;5:8724. Epub 2015 Mar 4.

1] Max Planck Florida Institute for Neuroscience, Jupiter, FL 33458, USA [2] Department of Neurobiology, Duke University Medical School, Durham, NC 27710, USA.

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http://dx.doi.org/10.1038/srep08724DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4348644PMC
March 2015

Plasticity of dendritic spines: subcompartmentalization of signaling.

Annu Rev Physiol 2014 6;76:365-85. Epub 2013 Nov 6.

Neuronal Signal Transduction, Max Planck Florida Institute for Neuroscience, Jupiter, Florida 33458; email: ,

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http://dx.doi.org/10.1146/annurev-physiol-021113-170400DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4142713PMC
September 2014

The effect of substrate topography on direct reprogramming of fibroblasts to induced neurons.

Biomaterials 2014 Jul 4;35(20):5327-5336. Epub 2014 Apr 4.

Department of Biomedical Engineering, Durham, NC 27708, USA. Electronic address:

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http://dx.doi.org/10.1016/j.biomaterials.2014.03.034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4023960PMC
July 2014

Loss of Cdc42 leads to defects in synaptic plasticity and remote memory recall.

Elife 2014 Jul 8;3. Epub 2014 Jul 8.

Department of Neurobiology, Duke University Medical School, Durham, United States.

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http://dx.doi.org/10.7554/eLife.02839DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4115656PMC
July 2014

Imaging the activity of Ras superfamily GTPase proteins in small subcellular compartments in neurons.

Methods Mol Biol 2014 ;1071:109-28

Department of Neurobiology, Duke University Medical Center, Durham, NC, USA.

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http://dx.doi.org/10.1007/978-1-62703-622-1_9DOI Listing
April 2014

Neurofibromin is the major ras inactivator in dendritic spines.

J Neurosci 2014 Jan;34(3):776-83

Department of Neurobiology, Duke University Medical Center, Durham, North Carolina 27710, Howard Hughes Medical Institute, Duke University Medical Center, Durham, North Carolina 27710, Max-Planck Florida Institute for Neuroscience, Jupiter, Florida 33458, and Doctoral Program in Biomedicine and Experimental Biology, Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal.

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http://dx.doi.org/10.1523/JNEUROSCI.3096-13.2014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3891958PMC
January 2014

An improved Ras sensor for highly sensitive and quantitative FRET-FLIM imaging.

PLoS One 2013 14;8(1):e52874. Epub 2013 Jan 14.

Department of Neurobiology, Duke University Medical Center, Durham, North Carolina, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0052874PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3544822PMC
July 2013

Wide-area scanner for high-speed atomic force microscopy.

Rev Sci Instrum 2013 May;84(5):053702

Department of Physics, College of Science and Engineering, Kanazawa University, Kanazawa 920-1192, Japan.

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http://dx.doi.org/10.1063/1.4803449DOI Listing
May 2013

Disruption of Arp2/3 results in asymmetric structural plasticity of dendritic spines and progressive synaptic and behavioral abnormalities.

J Neurosci 2013 Apr;33(14):6081-92

Department of Cell Biology, Howard Hughes Medical Institute, Duke University Medical School, Durham, North Carolina, 27710, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.0035-13.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3656411PMC
April 2013

Centaurin-α1-Ras-Elk-1 signaling at mitochondria mediates β-amyloid-induced synaptic dysfunction.

J Neurosci 2013 Mar;33(12):5367-74

Department of Neurobiology and Howard Hughes Medical Institute, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.2641-12.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3866502PMC
March 2013

Imaging intracellular signaling using two-photon fluorescent lifetime imaging microscopy.

Authors:
Ryohei Yasuda

Cold Spring Harb Protoc 2012 Nov 1;2012(11):1121-8. Epub 2012 Nov 1.

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http://dx.doi.org/10.1101/pdb.top072090DOI Listing
November 2012

Studying signal transduction in single dendritic spines.

Authors:
Ryohei Yasuda

Cold Spring Harb Perspect Biol 2012 Oct 1;4(10). Epub 2012 Oct 1.

Neurobiology Department, Howard Hughes Medical Institute, Duke University Medical Center, Durham, North Carolina 27710, USA.

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http://dx.doi.org/10.1101/cshperspect.a005611DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3475171PMC
October 2012

Modified SH2 domain to phototrap and identify phosphotyrosine proteins from subcellular sites within cells.

Proc Natl Acad Sci U S A 2012 Oct 1;109(43):E2929-38. Epub 2012 Oct 1.

Department of Cell Biology and Howard Hughes Medical Institute and Neurobiology Department, Duke University Medical School, Durham, NC 27710, USA.

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http://www.pnas.org/content/109/43/E2929.full.pdf
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http://www.pnas.org/cgi/doi/10.1073/pnas.1207358109
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http://dx.doi.org/10.1073/pnas.1207358109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491470PMC
October 2012

Imaging neural activity using Thy1-GCaMP transgenic mice.

Neuron 2012 Oct 17;76(2):297-308. Epub 2012 Oct 17.

McGovern Institute for Brain Research, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S08966273120066
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http://dx.doi.org/10.1016/j.neuron.2012.07.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4059513PMC
October 2012

Nonviral direct conversion of primary mouse embryonic fibroblasts to neuronal cells.

Mol Ther Nucleic Acids 2012 Jul 10;1:e32. Epub 2012 Jul 10.

Department of Biomedical Engineering, Duke University, Durham, North Carolina, USA.

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http://dx.doi.org/10.1038/mtna.2012.25DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3411320PMC
July 2012

Postsynaptic signaling during plasticity of dendritic spines.

Trends Neurosci 2012 Feb 3;35(2):135-43. Epub 2012 Jan 3.

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1016/j.tins.2011.12.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3306839PMC
February 2012

Mechanisms of CaMKII action in long-term potentiation.

Nat Rev Neurosci 2012 Feb 15;13(3):169-82. Epub 2012 Feb 15.

Department of Biology, Brandeis University, Waltham, Massachusetts 02454, USA.

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http://dx.doi.org/10.1038/nrn3192DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4050655PMC
February 2012

Signalling pathways underlying structural plasticity of dendritic spines.

Br J Pharmacol 2011 Aug;163(8):1626-38

Department of Neurobiology, Howard Hughes Medical Institute, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1111/j.1476-5381.2011.01328.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3166652PMC
August 2011

Local, persistent activation of Rho GTPases during plasticity of single dendritic spines.

Nature 2011 Apr 20;472(7341):100-4. Epub 2011 Mar 20.

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1038/nature09823DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105377PMC
April 2011

The mechanisms underlying the spatial spreading of signaling activity.

Curr Opin Neurobiol 2011 Apr 21;21(2):313-21. Epub 2011 Mar 21.

Department of Neurobiology, Duke University Medical Center, United States.

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http://dx.doi.org/10.1016/j.conb.2011.02.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111059PMC
April 2011

Impaired NMDA receptor transmission alters striatal synapses and DISC1 protein in an age-dependent manner.

Proc Natl Acad Sci U S A 2011 Apr 21;108(14):5795-800. Epub 2011 Mar 21.

Department of Pharmacology and Toxicology, University of Toronto, ON, Canada M5S 1A8.

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http://dx.doi.org/10.1073/pnas.1012621108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3078375PMC
April 2011

Regulation of the postsynaptic cytoskeleton: roles in development, plasticity, and disorders.

J Neurosci 2010 Nov;30(45):14937-42

Department of Biology, The University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3074493PMC
http://dx.doi.org/10.1523/JNEUROSCI.4276-10.2010DOI Listing
November 2010

AMPA receptors are exocytosed in stimulated spines and adjacent dendrites in a Ras-ERK-dependent manner during long-term potentiation.

Proc Natl Acad Sci U S A 2010 Sep 23;107(36):15951-6. Epub 2010 Aug 23.

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1073/pnas.0913875107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936631PMC
September 2010

Metaplasticity at single glutamatergic synapses.

Neuron 2010 Jun;66(6):859-70

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1016/j.neuron.2010.05.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2911980PMC
June 2010

Regional differences in hippocampal calcium handling provide a cellular mechanism for limiting plasticity.

Proc Natl Acad Sci U S A 2009 Aug 31;106(33):14080-4. Epub 2009 Jul 31.

Laboratory of Neurobiology, Department of Health and Human Services, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA.

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http://dx.doi.org/10.1073/pnas.0904775106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2729023PMC
August 2009

Activation of CaMKII in single dendritic spines during long-term potentiation.

Nature 2009 Mar;458(7236):299-304

Department of Neurobiology, Duke University Medical Center, Durham, North Carolina 27710, USA.

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http://dx.doi.org/10.1038/nature07842DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2719773PMC
March 2009

Spatiotemporal Regulation of Signaling in and out of Dendritic Spines: CaMKII and Ras.

Open Neurosci J 2009 Jan;3:117-127

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710.

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http://dx.doi.org/10.2174/1874082000903020117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2867484PMC
January 2009

A genetically encoded fluorescent sensor of ERK activity.

Proc Natl Acad Sci U S A 2008 Dec 25;105(49):19264-9. Epub 2008 Nov 25.

Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.

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http://dx.doi.org/10.1073/pnas.0804598105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2614750PMC
December 2008

Highly sensitive and quantitative FRET-FLIM imaging in single dendritic spines using improved non-radiative YFP.

Brain Cell Biol 2008 Aug 30;36(1-4):31-42. Epub 2008 May 30.

Department of Neurobiology, Duke University Medical Center, Durham, NC 27710, USA.

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http://dx.doi.org/10.1007/s11068-008-9024-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2673728PMC
August 2008

Optogenetic probes.

Brain Cell Biol 2008 Aug;36(1-4):1-2

Department of Neurobiology, Duke University Medical Center, Box 3209, Durham, NC 27710, USA.

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http://link.springer.com/10.1007/s11068-008-9037-4
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2673715PMC
August 2008

The spread of Ras activity triggered by activation of a single dendritic spine.

Science 2008 Jul 12;321(5885):136-40. Epub 2008 Jun 12.

Janelia Farm Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1159675
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2745709PMC
July 2008

Self-phase modulation signatures of neuronal activity.

Opt Lett 2008 Feb;33(3):219-21

Department of Chemistry, Duke University, Durham, NC 27708, USA.

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http://dx.doi.org/10.1364/ol.33.000219DOI Listing
February 2008

Imaging spatiotemporal dynamics of neuronal signaling using fluorescence resonance energy transfer and fluorescence lifetime imaging microscopy.

Authors:
Ryohei Yasuda

Curr Opin Neurobiol 2006 Oct 12;16(5):551-61. Epub 2006 Sep 12.

Neurobiology Department, Duke University Medical Center, Research Drive, Durham, NC 27710 USA.

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http://dx.doi.org/10.1016/j.conb.2006.08.012DOI Listing
October 2006

Nonlinear [Ca2+] signaling in dendrites and spines caused by activity-dependent depression of Ca2+ extrusion.

J Neurosci 2006 Aug;26(31):8183-94

Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.1962-06.2006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6673787PMC
August 2006

Principles of two-photon excitation microscopy and its applications to neuroscience.

Neuron 2006 Jun;50(6):823-39

HHMI, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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June 2006

Monitoring neural activity and [Ca2+] with genetically encoded Ca2+ indicators.

J Neurosci 2004 Oct;24(43):9572-9

Howard Hughes Medical Institute/Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.2854-04.2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6730159PMC
October 2004

Imaging calcium concentration dynamics in small neuronal compartments.

Sci STKE 2004 Feb 3;2004(219):pl5. Epub 2004 Feb 3.

Howard Hughes Medical Institute, The Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.

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February 2004

The number of glutamate receptors opened by synaptic stimulation in single hippocampal spines.

J Neurosci 2004 Feb;24(8):2054-64

Howard Hughes Medical Institute, The Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.5066-03.2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6730404PMC
February 2004

Mechanically driven ATP synthesis by F1-ATPase.

Nature 2004 Jan;427(6973):465-8

Tsukuba Research Laboratory, Hamamatsu Photonics KK, Joko, Hamamatsu 431-3103, Japan.

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January 2004

Catalysis and rotation of F1 motor: cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation.

Proc Natl Acad Sci U S A 2003 Dec 1;100(25):14731-6. Epub 2003 Dec 1.

Chemical Resources Laboratory, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8503, Japan.

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http://www.pnas.org/cgi/doi/10.1073/pnas.2434983100
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC299784PMC
December 2003

Plasticity of calcium channels in dendritic spines.

Nat Neurosci 2003 Sep;6(9):948-55

Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, 1 Bungtown Road Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1038/nn1112DOI Listing
September 2003

The ATP-waiting conformation of rotating F1-ATPase revealed by single-pair fluorescence resonance energy transfer.

Proc Natl Acad Sci U S A 2003 Aug 22;100(16):9314-8. Epub 2003 Jul 22.

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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http://dx.doi.org/10.1073/pnas.1637860100DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC170915PMC
August 2003