Ryan Lister

Ryan Lister

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Ryan Lister

Publications by authors named "Ryan Lister"

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Convergent evolution of a vertebrate-like methylome in a marine sponge.

Nat Ecol Evol 2019 Oct 26;3(10):1464-1473. Epub 2019 Sep 26.

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, Western Australia, Australia.

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http://dx.doi.org/10.1038/s41559-019-0983-2DOI Listing
October 2019

LINE-1 Evasion of Epigenetic Repression in Humans.

Mol Cell 2019 Aug 20;75(3):590-604.e12. Epub 2019 Jun 20.

Mater Research Institute, University of Queensland, TRI Building, Woolloongabba, QLD 4102, Australia; Queensland Brain Institute, University of Queensland, Brisbane, QLD 4072, Australia. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S10972765193039
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http://dx.doi.org/10.1016/j.molcel.2019.05.024DOI Listing
August 2019

Capture of a functionally active methyl-CpG binding domain by an arthropod retrotransposon family.

Genome Res 2019 08 25;29(8):1277-1286. Epub 2019 Jun 25.

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, Western Australia, 6009, Australia.

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http://dx.doi.org/10.1101/gr.243774.118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6673714PMC
August 2019

Retention of paternal DNA methylome in the developing zebrafish germline.

Nat Commun 2019 07 11;10(1):3054. Epub 2019 Jul 11.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, NSW, 2010, Australia.

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http://dx.doi.org/10.1038/s41467-019-10895-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6624265PMC
July 2019

HOME: a histogram based machine learning approach for effective identification of differentially methylated regions.

BMC Bioinformatics 2019 May 16;20(1):253. Epub 2019 May 16.

ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia.

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http://dx.doi.org/10.1186/s12859-019-2845-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521357PMC
May 2019

Generation of Whole Genome Bisulfite Sequencing Libraries for Comprehensive DNA Methylome Analysis.

Methods Mol Biol 2018 ;1767:291-298

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, WA, Australia.

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http://dx.doi.org/10.1007/978-1-4939-7774-1_16DOI Listing
February 2019

Approaches for the Analysis and Interpretation of Whole Genome Bisulfite Sequencing Data.

Methods Mol Biol 2018 ;1767:299-310

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, WA, Australia.

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http://dx.doi.org/10.1007/978-1-4939-7774-1_17DOI Listing
February 2019

A modular dCas9-SunTag DNMT3A epigenome editing system overcomes pervasive off-target activity of direct fusion dCas9-DNMT3A constructs.

Genome Res 2018 08 15;28(8):1193-1206. Epub 2018 Jun 15.

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, Western Australia 6009, Australia.

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http://dx.doi.org/10.1101/gr.233049.117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6071642PMC
August 2018

Author Correction: Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons.

Nat Commun 2018 05 1;9(1):1811. Epub 2018 May 1.

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, WA, 6009, Australia.

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http://dx.doi.org/10.1038/s41467-018-04260-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5931568PMC
May 2018

Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons.

Nat Commun 2018 04 9;9(1):1341. Epub 2018 Apr 9.

Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Perth, WA, 6009, Australia.

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http://dx.doi.org/10.1038/s41467-018-03724-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5890265PMC
April 2018

Cell Type of Origin Dictates the Route to Pluripotency.

Cell Rep 2017 Dec;21(10):2649-2660

Department of Anatomy and Developmental Biology, Monash University, Wellington Road, Clayton, VIC 3800, Australia; Development and Stem Cells Program, Monash Biomedicine Discovery Institute, Wellington Road, Clayton, VIC 3800, Australia; Australian Regenerative Medicine Institute, Monash University, Wellington Road, Clayton, VIC 3800, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.11.029DOI Listing
December 2017

Transient and Permanent Reconfiguration of Chromatin and Transcription Factor Occupancy Drive Reprogramming.

Cell Stem Cell 2017 Dec;21(6):834-845.e6

Department of Anatomy and Developmental Biology, Monash University, Wellington Road, Clayton, VIC 3800, Australia; Development and Stem Cells Program, Monash Biomedicine Discovery Institute, Wellington Road, Clayton, VIC 3800, Australia; Australian Regenerative Medicine Institute, Monash University, Wellington Road, Clayton, VIC 3800, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.stem.2017.11.007DOI Listing
December 2017

Nutrient stress-induced chromatin changes in plants.

Curr Opin Plant Biol 2017 10 22;39:1-7. Epub 2017 Apr 22.

ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia.

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http://dx.doi.org/10.1016/j.pbi.2017.04.001DOI Listing
October 2017

DNA methylation and the preservation of cell identity.

Curr Opin Genet Dev 2017 Oct 24;46:9-14. Epub 2017 Jun 24.

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Perth, Western Australia, Australia; Harry Perkins Institute of Medical Research, Perth, Western Australia, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2017.06.007DOI Listing
October 2017

Regulatory remodeling in the allo-tetraploid frog Xenopus laevis.

Genome Biol 2017 10 24;18(1):198. Epub 2017 Oct 24.

Radboud University, Faculty of Science, Department of Molecular Developmental Biology, Radboud Institute for Molecular Life Sciences, 6500 HB, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1186/s13059-017-1335-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655803PMC
October 2017

Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination.

Genome Biol 2017 09 15;18(1):172. Epub 2017 Sep 15.

ARC Centre of Excellence in Plant Energy Biology, Department of Animal, Plant and Soil Sciences, School of Life Sciences, La Trobe University, Melbourne, VIC, 3086, Australia.

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http://dx.doi.org/10.1186/s13059-017-1302-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5599894PMC
September 2017

Rapid Recovery Gene Downregulation during Excess-Light Stress and Recovery in Arabidopsis.

Plant Cell 2017 Aug 13;29(8):1836-1863. Epub 2017 Jul 13.

Australian Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, Australian National University Canberra, Acton ACT 0200, Australia

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http://dx.doi.org/10.1105/tpc.16.00828DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5590493PMC
August 2017

Epigenomic Landscapes of hESC-Derived Neural Rosettes: Modeling Neural Tube Formation and Diseases.

Cell Rep 2017 08;20(6):1448-1462

Division of Medical Genetics, Department of Medicine and Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA; Institute for Stem Cell and Regenerative Medicine, University of Washington School of Medicine, Seattle, WA, USA; Turku Centre for Biotechnology, University of Turku, Turku, Finland. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.07.036DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5561664PMC
August 2017

Synthetically controlling dendrimer flexibility improves delivery of large plasmid DNA.

Chem Sci 2017 Apr 27;8(4):2923-2930. Epub 2017 Jan 27.

School of Molecular Sciences , The University of Western Australia , 35 Stirling Hwy , Crawley , WA 6009 , Australia . Email: ; Email:

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http://dx.doi.org/10.1039/c7sc00097aDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5376716PMC
April 2017

Dynamic and rapid changes in the transcriptome and epigenome during germination and in developing rice (Oryza sativa) coleoptiles under anoxia and re-oxygenation.

Plant J 2017 Feb 11;89(4):805-824. Epub 2017 Feb 11.

Department of Animal, Plant and Soil Science, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Vic, 3086, Australia.

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http://dx.doi.org/10.1111/tpj.13418DOI Listing
February 2017

Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation.

Elife 2016 12 2;5. Epub 2016 Dec 2.

ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia.

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http://dx.doi.org/10.7554/eLife.20777DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5167521PMC
December 2016

Retrograde signalling caused by heritable mitochondrial dysfunction is partially mediated by ANAC017 and improves plant performance.

Plant J 2016 11 17;88(4):542-558. Epub 2016 Oct 17.

Faculty of Science, ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Bayliss Building M316, 35 Stirling Highway, Crawley, 6009, Western Australia, Australia.

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http://dx.doi.org/10.1111/tpj.13276DOI Listing
November 2016

DNA methylation profiles of diverse Brachypodium distachyon align with underlying genetic diversity.

Genome Res 2016 11 9;26(11):1520-1531. Epub 2016 Sep 9.

ARC Centre of Excellence in Plant Energy Biology, The Australian National University, Canberra, Australia, 2601.

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http://dx.doi.org/10.1101/gr.205468.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5088594PMC
November 2016

Genome evolution in the allotetraploid frog Xenopus laevis.

Nature 2016 10;538(7625):336-343

University of California, Berkeley, Department of Molecular and Cell Biology and Center for Integrative Genomics, Life Sciences Addition #3200, Berkeley, California 94720-3200, USA.

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http://dx.doi.org/10.1038/nature19840DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5313049PMC
October 2016

Unique cell-type-specific patterns of DNA methylation in the root meristem.

Nat Plants 2016 04 29;2(5):16058. Epub 2016 Apr 29.

Plant Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.

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http://dx.doi.org/10.1038/nplants.2016.58DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4855458PMC
April 2016

Epigenomic landscapes of retinal rods and cones.

Elife 2016 Mar 7;5:e11613. Epub 2016 Mar 7.

Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, United States.

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http://dx.doi.org/10.7554/eLife.11613DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4798964PMC
March 2016

Embryonic transcription is controlled by maternally defined chromatin state.

Nat Commun 2015 Dec 18;6:10148. Epub 2015 Dec 18.

Department of Molecular Developmental Biology, Radboud Institute for Molecular Life Sciences, Faculty of Science, Radboud University, PO Box 9101, 6500 HB Nijmegen, The Netherlands.

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http://dx.doi.org/10.1038/ncomms10148DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703837PMC
December 2015

methylPipe and compEpiTools: a suite of R packages for the integrative analysis of epigenomics data.

BMC Bioinformatics 2015 Sep 29;16:313. Epub 2015 Sep 29.

Center for Genomic Science of IIT@SEMM, Istituto Italiano di Tecnologia (IIT), Milano, 20139, Italy.

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http://dx.doi.org/10.1186/s12859-015-0742-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587815PMC
September 2015

Turning over DNA methylation in the mind.

Front Neurosci 2015 30;9:252. Epub 2015 Jul 30.

Department of Cognitive Science, University of California San Diego La Jolla, CA, USA.

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http://dx.doi.org/10.3389/fnins.2015.00252DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4519686PMC
August 2015

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements.

Elife 2015 Jul 21;4. Epub 2015 Jul 21.

ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Perth, Australia.

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http://dx.doi.org/10.7554/eLife.09343DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4534844PMC
July 2015

Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain.

Neuron 2015 Jun;86(6):1369-84

Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Howard Hughes Medical Institute, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2015.05.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499463PMC
June 2015

Of Mice and Man: Differential DNMT Dependence in Mammalian ESCs.

Cell Stem Cell 2015 May;16(5):459-60

ARC Center of Excellence in Plant Energy Biology, The University of Western Australia, Perth, WA 6009, Australia; The Harry Perkins Institute of Medical Research, Perth, WA 6009, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.stem.2015.04.009DOI Listing
May 2015

MethylC-seq library preparation for base-resolution whole-genome bisulfite sequencing.

Nat Protoc 2015 Mar 18;10(3):475-83. Epub 2015 Feb 18.

1] Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, California, USA. [2] Howard Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, California, USA.

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http://www.nature.com/articles/nprot.2014.114
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http://dx.doi.org/10.1038/nprot.2014.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4465251PMC
March 2015

Integrative analysis of 111 reference human epigenomes.

Nature 2015 Feb;518(7539):317-30

1] Computer Science and Artificial Intelligence Lab, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, Massachusetts 02139, USA. [2] The Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, Massachusetts 02142, USA.

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http://dx.doi.org/10.1038/nature14248DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4530010PMC
February 2015

Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation.

Nucleic Acids Res 2014 13;42(16):10856-68. Epub 2014 Aug 13.

Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA 90089, USA

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http://dx.doi.org/10.1093/nar/gku708DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4176344PMC
January 2015

Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways.

Genome Res 2014 Oct 28;24(10):1613-23. Epub 2014 Aug 28.

Mouse Cancer Genetics Program, Center for Cancer Research, National Cancer Institute, Frederick, Maryland 21702, USA; Leidos Biomedical Research, Inc., Basic Science Program, Frederick National Laboratory, Frederick, Maryland 21702, USA

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http://dx.doi.org/10.1101/gr.172015.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4199375PMC
October 2014

CG hypomethylation in Lsh-/- mouse embryonic fibroblasts is associated with de novo H3K4me1 formation and altered cellular plasticity.

Proc Natl Acad Sci U S A 2014 Apr 7;111(16):5890-5. Epub 2014 Apr 7.

Mouse Cancer and Genetics Program, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702.

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http://dx.doi.org/10.1073/pnas.1320945111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4000807PMC
April 2014

STAR: an integrated solution to management and visualization of sequencing data.

Bioinformatics 2013 Dec 27;29(24):3204-10. Epub 2013 Sep 27.

Department of Chemistry and Biochemistry, University of California, San Diego, CA 92093, USA, Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA, The ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Crawley, Western Australia 6009, Australia, Key Laboratory for Symbolic Computation and Knowledge Engineering of Ministry of Education, College of Computer Science and Technology, Jilin University, Changchun 130012, China, Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037, USA, Department of Cellular and Molecular Medicine, University of California, San Diego, CA 92093, USA and Ludwig Institute for Cancer Research, La Jolla, CA 92093, USA.

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http://bioinformatics.oxfordjournals.org/content/early/2013/
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http://bioinformatics.oxfordjournals.org/cgi/doi/10.1093/bio
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http://dx.doi.org/10.1093/bioinformatics/btt558DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3842760PMC
December 2013

Widespread dynamic DNA methylation in response to biotic stress.

Proc Natl Acad Sci U S A 2012 Aug 25;109(32):E2183-91. Epub 2012 Jun 25.

Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1073/pnas.1209329109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3420206PMC
August 2012

Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells.

Nature 2011 May 8;473(7347):394-7. Epub 2011 May 8.

Harvard Medical School, Immune Disease Institute and Program in Cellular and Molecular Medicine, Children's Hospital Boston, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/nature10102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3124347PMC
May 2011

Finding the fifth base: genome-wide sequencing of cytosine methylation.

Genome Res 2009 Jun 9;19(6):959-66. Epub 2009 Mar 9.

Genomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, California 92037, USA.

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http://genome.cshlp.org/cgi/doi/10.1101/gr.083451.108
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http://dx.doi.org/10.1101/gr.083451.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3807530PMC
June 2009

The Arabidopsis glutathione transferase gene family displays complex stress regulation and co-silencing multiple genes results in altered metabolic sensitivity to oxidative stress.

Plant J 2009 Apr 19;58(1):53-68. Epub 2009 Jan 19.

ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, Crawley, WA 6009, Australia.

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http://dx.doi.org/10.1111/j.1365-313X.2008.03761.xDOI Listing
April 2009

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond.

Curr Opin Plant Biol 2009 Apr 20;12(2):107-18. Epub 2009 Jan 20.

Plant Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1016/j.pbi.2008.11.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2723731PMC
April 2009

Identification of regulatory pathways controlling gene expression of stress-responsive mitochondrial proteins in Arabidopsis.

Plant Physiol 2008 Aug 20;147(4):1858-73. Epub 2008 Jun 20.

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley 6009, Western Australia, Australia.

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http://www.plantphysiol.org/cgi/doi/10.1104/pp.108.121384
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http://dx.doi.org/10.1104/pp.108.121384DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2492625PMC
August 2008

A link between RNA metabolism and silencing affecting Arabidopsis development.

Dev Cell 2008 Jun 22;14(6):854-66. Epub 2008 May 22.

Plant Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1016/j.devcel.2008.04.005DOI Listing
June 2008

Functional definition of outer membrane proteins involved in preprotein import into mitochondria.

Plant Cell 2007 Nov 2;19(11):3739-59. Epub 2007 Nov 2.

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley 6009, Western Australia, Australia.

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http://dx.doi.org/10.1105/tpc.107.050534DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2174869PMC
November 2007

Characterization of the regulatory and expression context of an alternative oxidase gene provides insights into cyanide-insensitive respiration during growth and development.

Plant Physiol 2007 Apr 23;143(4):1519-33. Epub 2007 Feb 23.

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

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http://dx.doi.org/10.1104/pp.106.091819DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1851840PMC
April 2007

Characterization of the preprotein and amino acid transporter gene family in Arabidopsis.

Plant Physiol 2007 Jan 10;143(1):199-212. Epub 2006 Nov 10.

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

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http://dx.doi.org/10.1104/pp.106.090688DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1761978PMC
January 2007

Mitochondrial protein import: convergent solutions for receptor structure.

Curr Biol 2006 Mar;16(6):R197-9

ARC Centre of Excellence in Plant Energy Biology, MCS Building M310, University of Western Australia, 35 Stirling Highway, Crawley 6009, Western Australia, Australia.

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http://linkinghub.elsevier.com/retrieve/pii/S096098220601174
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http://dx.doi.org/10.1016/j.cub.2006.02.024DOI Listing
March 2006

Protein import into mitochondria: origins and functions today (review).

Mol Membr Biol 2005 Jan-Apr;22(1-2):87-100

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley, Western Australia, Australia.

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September 2005

Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana.

Plant Mol Biol 2005 May;58(2):193-212

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley, Western Australia, Australia.

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http://link.springer.com/10.1007/s11103-005-5514-7
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http://dx.doi.org/10.1007/s11103-005-5514-7DOI Listing
May 2005

A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction.

Plant Physiol 2004 Feb 15;134(2):777-89. Epub 2004 Jan 15.

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6009, Australia.

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http://www.plantphysiol.org/cgi/doi/10.1104/pp.103.033910
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http://dx.doi.org/10.1104/pp.103.033910DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC344553PMC
February 2004

A plant outer mitochondrial membrane protein with high amino acid sequence identity to a chloroplast protein import receptor.

FEBS Lett 2004 Jan;557(1-3):109-14

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, 35 Stirling Highway, Nedlands, WA 6009, Australia.

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http://dx.doi.org/10.1016/s0014-5793(03)01457-1DOI Listing
January 2004

Identification, expression, and import of components 17 and 23 of the inner mitochondrial membrane translocase from Arabidopsis.

Plant Physiol 2003 Apr;131(4):1737-47

Plant Molecular Biology Group, Biochemistry and Molecular Biology, School of Biomedical and Chemical Sciences, University of Western Australia, 35 Stirling Highway, Crawley 6009, Australia.

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http://dx.doi.org/10.1104/pp.102.016808DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC166929PMC
April 2003

The Mitochondrial Protein Import Machinery of Plants (MPIMP) database.

Nucleic Acids Res 2003 Jan;31(1):325-7

Plant Molecular Biology Group, Biochemistry and Molecular Biology, School of Biomedical and Chemical Sciences, University of Western Australia, 35 Stirling Highway, Crawley 6009, Western Australia.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC165502PMC
http://dx.doi.org/10.1093/nar/gkg055DOI Listing
January 2003

Zinc-dependent intermembrane space proteins stimulate import of carrier proteins into plant mitochondria.

Plant J 2002 Jun;30(5):555-66

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley 6009, WA, Australia.

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http://dx.doi.org/10.1046/j.1365-313x.2002.01316.xDOI Listing
June 2002