Ryan D Morin

Ryan D Morin

UNVERIFIED PROFILE

Are you Ryan D Morin?   Register this Author

Register author
Ryan D Morin

Ryan D Morin

Publications by authors named "Ryan D Morin"

Are you Ryan D Morin?   Register this Author

76Publications

2956Reads

44Profile Views

SUBSTRA: Supervised Bayesian Patient Stratification.

Bioinformatics 2019 Sep;35(18):3263-3272

Computational Systems Immunology, Pfizer Worldwide R&D, Berlin, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btz112DOI Listing
September 2019

Ultrasensitive Detection of Circulating Tumor DNA in Lymphoma via Targeted Hybridization Capture and Deep Sequencing of Barcoded Libraries.

Methods Mol Biol 2019 ;1956:383-435

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-4939-9151-8_20DOI Listing
July 2019

Novel Multiplexing Strategies for Quantification of Rare Alleles Using ddPCR.

Methods Mol Biol 2018 ;1768:275-301

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-4939-7778-9_16DOI Listing
February 2019

Disruption of the Gut Microbiota With Antibiotics Exacerbates Acute Vascular Rejection.

Transplantation 2018 07;102(7):1085-1095

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1097/TP.0000000000002169DOI Listing
July 2018

Investigating the Genetic Causes of Sudden Unexpected Death in Children Through Targeted Next-Generation Sequencing Analysis.

Circ Cardiovasc Genet 2017 Aug;10(4)

From the Departments of Biomedical Physiology and Kinesiology (L.J.D., S.S., C.M.S., G.F.T.) and Molecular Biology and Biochemistry (M.A., D.F., L.D., C.M.S., R.D.M., G.F.T.), Simon Fraser University, Burnaby, British Columbia, Canada; BC Children's Hospital Research Institute, Vancouver, Canada (L.J.D., S.S., C.M.S., G.F.T.); Department of Pathology, Faculty of Medicine, University of Manitoba, Winnipeg, Canada (T.B., S.M.P.); and Division of Pediatric Cardiology, Department of Pediatrics, British Columbia Children's Hospital, University of British Columbia, Vancouver, Canada (S.S.).

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1161/CIRCGENETICS.116.001738DOI Listing
August 2017

Kronos: a workflow assembler for genome analytics and informatics.

Gigascience 2017 07;6(7):1-10

Department of Molecular Oncology, British Columbia Cancer Agency, 675 West 10th Ave, V5Z 1L3 Vancouver, BC, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/gigascience/gix042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5569921PMC
July 2017

Genome-wide chemical mapping of O-GlcNAcylated proteins in Drosophila melanogaster.

Nat Chem Biol 2017 02 5;13(2):161-167. Epub 2016 Dec 5.

Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nchembio.2247DOI Listing
February 2017

FOXL2 402C>G Mutation Can Be Identified in the Circulating Tumor DNA of Patients with Adult-Type Granulosa Cell Tumor.

J Mol Diagn 2017 01 1;19(1):126-136. Epub 2016 Nov 1.

Department of Pathology and Laboratory Medicine, University of British Columbia, and the Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jmoldx.2016.08.005DOI Listing
January 2017

Cell-free DNA (cfDNA): Clinical Significance and Utility in Cancer Shaped By Emerging Technologies.

Mol Cancer Res 2016 10 15;14(10):898-908. Epub 2016 Jul 15.

Vancouver Prostate Centre, Vancouver, British Columbia, Canada. Department of Urologic Sciences, University of British Columbia, Vancouver, British Columbia, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1541-7786.MCR-16-0044DOI Listing
October 2016

Comprehensive characterization of programmed death ligand structural rearrangements in B-cell non-Hodgkin lymphomas.

Blood 2016 09 7;128(9):1206-13. Epub 2016 Jun 7.

Centre for Lymphoid Cancer, British Columbia Cancer Agency, Vancouver, BC, Canada; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada;

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1182/blood-2015-11-683003DOI Listing
September 2016

Multiplex Droplet Digital PCR Quantification of Recurrent Somatic Mutations in Diffuse Large B-Cell and Follicular Lymphoma.

Clin Chem 2016 09 20;62(9):1238-47. Epub 2016 Jul 20.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada; Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.

View Article

Download full-text PDF

Source
http://clinchem.aaccjnls.org/content/clinchem/early/2016/07/
Web Search
http://dx.doi.org/10.1373/clinchem.2016.255315DOI Listing
September 2016

Toward Personalized Lymphoma Immunotherapy: Identification of Common Driver Mutations Recognized by Patient CD8+ T Cells.

Clin Cancer Res 2016 05 2;22(9):2226-36. Epub 2015 Dec 2.

Trev and Joyce Deeley Research Centre, British Columbia Cancer Agency, Victoria, British Columbia, Canada. Department of Medical Genetics, University of British Columbia, Vancouver, British Columbia, Canada. Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1078-0432.CCR-15-2023DOI Listing
May 2016

Genetic inactivation of TRAF3 in canine and human B-cell lymphoma.

Blood 2015 Feb 2;125(6):999-1005. Epub 2014 Dec 2.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada; Genome Sciences Centre, BC Cancer Agency, Vancouver, BC, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1182/blood-2014-10-602714DOI Listing
February 2015

Newly identified mechanisms in B-cell non-Hodgkin lymphomas uncovered by next-generation sequencing.

Semin Hematol 2013 Oct;50(4):303-13

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada; Genome Sciences Centre, British Columbia Cancer Agency. Vancouver, British Columbia, Canada. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1053/j.seminhematol.2013.09.004DOI Listing
October 2013

BCL6 repression of EP300 in human diffuse large B cell lymphoma cells provides a basis for rational combinatorial therapy.

J Clin Invest 2010 Dec 1;120(12):4569-82. Epub 2010 Nov 1.

Hematology and Oncology Division, and Department of Pharmacology, Weill Cornell Medical College, New York, New York, USA. Department of Molecular Pharmacology and Chemistry, Sloan-Kettering Institute, New York, New York, USA. Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, British Columbia, Canada. Department of Pathology, Weill Cornell Medical College, New York, New York, USA. Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA. The University of Kansas Cancer Center, Kansas University Medical Center, Kansas City, Kansas, USA. Centre for Lymphoid Cancers and the Departments of Pathology and Experimental Therapeutics, British Columbia Cancer Agency, British Columbia Cancer Research Centre, Vancouver, British Columbia, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1172/JCI42869DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2993589PMC
December 2010

MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing.

Mol Hum Reprod 2010 Jul 9;16(7):463-71. Epub 2010 Mar 9.

Department of Obstetrics, Gynecology and Reproductive Sciences, Magee-Womens Research Institute, University of Pittsburgh, Pittsburgh, PA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/molehr/gaq017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2882868PMC
July 2010

SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors.

Bioinformatics 2010 Mar 3;26(6):730-6. Epub 2010 Feb 3.

Department of Molecular Oncology Breast Cancer Research Program, British Columbia Cancer Research Centre, Vancouver, BC, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btq040DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2832826PMC
March 2010

Next-generation tag sequencing for cancer gene expression profiling.

Genome Res 2009 Oct 18;19(10):1825-35. Epub 2009 Jun 18.

Genome Sciences Centre, Vancouver, British Columbia, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.094482.109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2765282PMC
October 2009

Conifers have a unique small RNA silencing signature.

RNA 2008 Aug 19;14(8):1508-15. Epub 2008 Jun 19.

Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada V5A 1S6.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1261/rna.1052008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2491476PMC
August 2008

Management and visualization of whole genome shotgun assemblies using SAM.

Biotechniques 2005 May;38(5):715-6, 718, 720

Genome Sciences Centre, Vancouver, BC, Canada.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.2144/05385ST01DOI Listing
May 2005