Publications by authors named "Rosario M Piro"

19Publications

Impact of mutational signatures on microRNA and their response elements.

Pac Symp Biocomput 2020 ;25:250-261

Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milano, Italy,

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January 2020

decompTumor2Sig: identification of mutational signatures active in individual tumors.

BMC Bioinformatics 2019 Apr 18;20(Suppl 4):152. Epub 2019 Apr 18.

Institute of Computer Science and Institute of Bioinformatics, Freie Universität Berlin, Berlin, Germany.

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http://dx.doi.org/10.1186/s12859-019-2688-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6472187PMC
April 2019

Author Correction: The landscape of genomic alterations across childhood cancers.

Nature 2018 07;559(7714):E10

Hopp-Children's Cancer Center at the NCT Heidelberg (KiTZ), Heidelberg, Germany.

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http://dx.doi.org/10.1038/s41586-018-0167-2DOI Listing
July 2018

The landscape of genomic alterations across childhood cancers.

Nature 2018 03 28;555(7696):321-327. Epub 2018 Feb 28.

Hopp-Children's Cancer Center at the NCT Heidelberg (KiTZ), Heidelberg, Germany.

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http://dx.doi.org/10.1038/nature25480DOI Listing
March 2018

Molecular Transition of an Adult Low-Grade Brain Tumor to an Atypical Teratoid/Rhabdoid Tumor Over a Time-Course of 14 Years.

J Neuropathol Exp Neurol 2017 Aug;76(8):655-664

Department of Neurosurgery, Universitätsmedizin Mannheim, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany (YS, SB, MSR); Department of Neurosurgery, Evangelisches Krankenhaus Bielefeld, Bielefeld, Germany (ZM); Division of Pediatric Neurooncology, German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany (DTWJ); Department of Neuropathology, Institute of Pathology, University of Heidelberg, Heidelberg, Germany (CK, DS, AvD, DC); Clinical Cooperation Unit Neuropathology, German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany (CK, MB, PF, DS, AvD, DC); Institute of Computer Science, Freie Universität Berlin and Institute of Medical Genetics and Human Genetics, Charité Universitätsmedizin Berlin, Berlin, Germany (RMP); Department of Neuroradiology, University Medical Center Mannheim, Heidelberg University, Mannheim, Germany (UK); and Department of Neuropathology, Charité Universitätsmedizin Berlin and German Cancer Consortium (DKTK), Partner Site Berlin, German Cancer Research Center (DKFZ), Heidelberg, Germany (DC).

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http://dx.doi.org/10.1093/jnen/nlx044DOI Listing
August 2017

No correlation between NF1 mutation position and risk of optic pathway glioma in 77 unrelated NF1 patients.

Hum Genet 2016 May 11;135(5):469-475. Epub 2016 Mar 11.

Division of Pediatric Neurooncology, German Cancer Research Center (DKFZ), Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.

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http://dx.doi.org/10.1007/s00439-016-1646-xDOI Listing
May 2016

Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling.

BMC Syst Biol 2014 May 16;8:56. Epub 2014 May 16.

Division of Theoretical Bioinformatics, German Cancer Research Center (Deutsches Krebsforschungszentrum, DKFZ), Heidelberg, Germany.

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http://dx.doi.org/10.1186/1752-0509-8-56DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4031158PMC
May 2014

Genome sequencing of SHH medulloblastoma predicts genotype-related response to smoothened inhibition.

Cancer Cell 2014 Mar;25(3):393-405

Division of Pediatric Neurooncology, German Cancer Research Center (DKFZ), 69121 Heidelberg, Germany; Department of Pediatric Oncology, Hematology and Immunology, University Hospital Heidelberg, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1016/j.ccr.2014.02.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493053PMC
March 2014

Disease-gene discovery by integration of 3D gene expression and transcription factor binding affinities.

Bioinformatics 2013 Feb 24;29(4):468-75. Epub 2012 Dec 24.

Department of Theoretical Bioinformatics, German Cancer Research Center (Deutsches Krebsforschungszentrum, DKFZ), University of Heidelberg, Im 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1093/bioinformatics/bts720DOI Listing
February 2013

Network medicine: linking disorders.

Authors:
Rosario M Piro

Hum Genet 2012 Dec 24;131(12):1811-20. Epub 2012 Jul 24.

Department of Theoretical Bioinformatics, German Cancer Research Center, Im Neuenheimer Feld 280, Heidelberg, Germany.

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http://dx.doi.org/10.1007/s00439-012-1206-yDOI Listing
December 2012

Computational approaches to disease-gene prediction: rationale, classification and successes.

FEBS J 2012 Mar 30;279(5):678-96. Epub 2012 Jan 30.

Department of Theoretical Bioinformatics, German Cancer Research Center, (DKFZ), Heidelberg, Germany.  

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http://dx.doi.org/10.1111/j.1742-4658.2012.08471.xDOI Listing
March 2012

Evaluation of candidate genes from orphan FEB and GEFS+ loci by analysis of human brain gene expression atlases.

PLoS One 2011 17;6(8):e23149. Epub 2011 Aug 17.

Molecular Biotechnology Center and Department of Genetics, Biology and Biochemistry, University of Torino, Torino, Italy.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0023149PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3157479PMC
February 2012

Candidate gene prioritization based on spatially mapped gene expression: an application to XLMR.

Bioinformatics 2010 Sep;26(18):i618-24

Molecular Biotechnology Center, Biology and Biochemistry, University of Torino, Torino, Italy.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btq396DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935433PMC
September 2010

Generation of functional hepatocytes from mouse germ line cell-derived pluripotent stem cells in vitro.

Stem Cells Dev 2010 Aug;19(8):1183-94

Department of Genetics, Biology and Biochemistry and Molecular Biotechnology Center, University of Turin, Turin, Italy.

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http://dx.doi.org/10.1089/scd.2009.0496DOI Listing
August 2010