Robert R Freimuth

Robert R Freimuth

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Robert R Freimuth

Robert R Freimuth

Publications by authors named "Robert R Freimuth"

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Prototype of a Standards-Based EHR and Genetic Test Reporting Tool Coupled with HL7-Compliant Infobuttons.

AMIA Jt Summits Transl Sci Proc 2018 18;2017:330-339. Epub 2018 May 18.

Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961781PMC
May 2018

Creating Shareable Clinical Decision Support Rules for a Pharmacogenomics Clinical Guideline Using Structured Knowledge Representation.

AMIA Annu Symp Proc 2015 5;2015:1985-94. Epub 2015 Nov 5.

Office of Information and Knowledge Management, Mayo Clinic, Rochester, MN; Department of Health Sciences Research, Mayo Clinic, Rochester, MN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765632PMC
April 2018

Knowledge as a Service at the Point of Care.

AMIA Annu Symp Proc 2016 10;2016:1139-1148. Epub 2017 Feb 10.

Office of Information and Knowledge Management, Mayo Clinic, Rochester, MN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5333226PMC
August 2017

Analyzing the potential for incorrect haplotype calls with different pharmacogenomic assays in different populations: a simulation based on 1000 Genomes data.

Pharmacogenomics 2015 30;16(15):1713-21. Epub 2015 Sep 30.

Department of Health Sciences Research, Mayo Clinic, 200 First Street SW, Rochester, MN 55905, USA.

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http://dx.doi.org/10.2217/pgs.15.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4946345PMC
July 2016

The genomic CDS sandbox: An assessment among domain experts.

J Biomed Inform 2016 Apr 15;60:84-94. Epub 2016 Jan 15.

Medical University of South Carolina, Charleston, SC, United States. Electronic address:

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http://dx.doi.org/10.1016/j.jbi.2015.12.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4948866PMC
April 2016

Harnessing next-generation informatics for personalizing medicine: a report from AMIA's 2014 Health Policy Invitational Meeting.

J Am Med Inform Assoc 2016 Mar 5;23(2):413-9. Epub 2016 Feb 5.

Center for Biomedical Informatics, Brown University, Providence, Rhode Island, USA.

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http://dx.doi.org/10.1093/jamia/ocv111DOI Listing
March 2016

CSER and eMERGE: current and potential state of the display of genetic information in the electronic health record.

J Am Med Inform Assoc 2015 Nov 3;22(6):1231-42. Epub 2015 Jul 3.

Genome Medicine Institute, Geisinger Medical Center, Danville, PA, USA Department of Medicine, Program for Personalized and Genomic Medicine and Center for Health-Related Informatics and Bioimaging, University of Maryland School of Medicine, Baltimore, MD, USA.

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http://dx.doi.org/10.1093/jamia/ocv065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5009914PMC
November 2015

Evaluation of RxNorm for Medication Clinical Decision Support.

AMIA Annu Symp Proc 2014 14;2014:554-63. Epub 2014 Nov 14.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Rochester, MN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4419908PMC
August 2015

Simplifying complex clinical element models to encourage adoption.

AMIA Jt Summits Transl Sci Proc 2014 7;2014:26-31. Epub 2014 Apr 7.

Department of Health Sciences Research, Mayo Clinic, Rochester, MN.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4419759PMC
May 2015

Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies.

BMC Med Inform Decis Mak 2015 Feb 22;15:12. Epub 2015 Feb 22.

Stanford Center for Biomedical Informatics Research, Stanford University, 1265 Welch Road, Stanford, CA, 94305-5479, USA.

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http://dx.doi.org/10.1186/s12911-015-0130-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4340468PMC
February 2015

Integrating VA's NDF-RT drug terminology with PharmGKB: preliminary results.

Pac Symp Biocomput 2012 :400-9

Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3909655PMC
December 2013

Mining Genotype-Phenotype Associations from Public Knowledge Sources via Semantic Web Querying.

AMIA Jt Summits Transl Sci Proc 2013 18;2013:118-22. Epub 2013 Mar 18.

Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3845769PMC
December 2013

Using clinical element models for pharmacogenomic study data standardization.

AMIA Jt Summits Transl Sci Proc 2013 18;2013:292-6. Epub 2013 Mar 18.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3845787PMC
December 2013

Toward semantic modeling of pharmacogenomic knowledge for clinical and translational decision support.

AMIA Jt Summits Transl Sci Proc 2013 18;2013:28-32. Epub 2013 Mar 18.

University of Pittsburgh, Pittsburgh, PA;

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3814496PMC
December 2013

PharmGKB Drug Data Normalization with NDF-RT.

AMIA Jt Summits Transl Sci Proc 2013 18;2013:180. Epub 2013 Mar 18.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4852296PMC
December 2013

A Weighted Random Forests Approach to Improve Predictive Performance.

Stat Anal Data Min 2013 Dec;6(6):496-505

Department of Health Sciences Research, Mayo Clinic, 200 First Street Southwest, Rochester, MN 55905 USA ; Department of Psychiatry and Psychology, Mayo Clinic, 200 First Street Southwest, Rochester, MN 55905 USA.

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http://dx.doi.org/10.1002/sam.11196DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3912194PMC
December 2013

Making data on essential pharmacogenes available for every patient everywhere: the Medicine Safety Code initiative.

Pharmacogenomics 2013 Oct;14(13):1529-31

Section for Medical Expert & Knowledge-Based Systems, Center for Medical Statistics, Informatics & Intelligent Systems, Medical University of Vienna, Spitalgasse 23, A-1090 Vienna, Austria.

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http://dx.doi.org/10.2217/pgs.13.121DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4028543PMC
October 2013

The Pharmacogenomics Research Network Translational Pharmacogenetics Program: overcoming challenges of real-world implementation.

Clin Pharmacol Ther 2013 Aug 19;94(2):207-10. Epub 2013 Mar 19.

Program in Personalized and Genomic Medicine and Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1038/clpt.2013.59DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3720847PMC
August 2013

Disambiguation of PharmGKB drug-disease relations with NDF-RT and SPL.

J Biomed Inform 2013 Aug 29;46(4):690-6. Epub 2013 May 29.

Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1016/j.jbi.2013.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3746070PMC
August 2013

Life sciences domain analysis model.

J Am Med Inform Assoc 2012 Nov-Dec;19(6):1095-102. Epub 2012 Jun 28.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, USA.

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http://dx.doi.org/10.1136/amiajnl-2011-000763DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3486731PMC
April 2013

SNP interaction detection with Random Forests in high-dimensional genetic data.

BMC Bioinformatics 2012 Jul 15;13:164. Epub 2012 Jul 15.

Department of Health Sciences Research, Mayo Clinic, 200 First Street Southwest, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1186/1471-2105-13-164DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3463421PMC
July 2012

Semantically enabling pharmacogenomic data for the realization of personalized medicine.

Pharmacogenomics 2012 Jan;13(2):201-12

Department of Medical Statistics & Bioinformatics, Leiden University Medical Center/Informatics Institute, University of Amsterdam, Einthovenweg 20, 2333 ZC Leiden, The Netherlands.

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http://dx.doi.org/10.2217/pgs.11.179DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3957334PMC
January 2012

DNA methylotype analysis in colorectal cancer.

Oncol Rep 2008 Oct;20(4):921-7

Department of Medicine, Washington University School of Medicine, Saint Louis, MO 63110, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4294550PMC
October 2008

Analysis of peripheral nerve expression profiles identifies a novel myelin glycoprotein, MP11.

J Neurosci 2008 Jul;28(30):7563-73

Department of Pathology and Immunology, Washington University School of Medicine, St Louis, Missouri 63110, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.1659-08.2008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2643251PMC
July 2008

DNA repair pathway profiling and microsatellite instability in colorectal cancer.

Clin Cancer Res 2006 Sep;12(17):5104-11

Department of Medicine, Washington University School of Medicine and Siteman Cancer Center, Saint Louis, Missouri 63110-1093, USA.

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http://clincancerres.aacrjournals.org/content/12/17/5104.ful
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http://clincancerres.aacrjournals.org/cgi/doi/10.1158/1078-0
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http://dx.doi.org/10.1158/1078-0432.CCR-06-0547DOI Listing
September 2006

Polymorphism discovery in 51 chemotherapy pathway genes.

Hum Mol Genet 2005 Dec 20;14(23):3595-603. Epub 2005 Oct 20.

Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA.

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http://dx.doi.org/10.1093/hmg/ddi387DOI Listing
December 2005

PolyMAPr: programs for polymorphism database mining, annotation, and functional analysis.

Hum Mutat 2005 Feb;25(2):110-7

Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63110, USA.

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http://dx.doi.org/10.1002/humu.20123DOI Listing
February 2005

Pharmacogenomic assessment of carboxylesterases 1 and 2.

Genomics 2004 Oct;84(4):661-8

Department of Medicine, Washington University School of Medicine and the Siteman Cancer Center, St Louis, MO 63110, USA.

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http://dx.doi.org/10.1016/j.ygeno.2004.07.008DOI Listing
October 2004

A proposed nomenclature system for the cytosolic sulfotransferase (SULT) superfamily.

Pharmacogenetics 2004 Mar;14(3):199-211

Department of Pharmacology, Fox Chase Cancer Center, Philadelphia, Pennsylvania, USA.

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March 2004

Human 3'-phosphoadenosine 5'-phosphosulfate synthetase 2 (PAPSS2) pharmacogenetics: gene resequencing, genetic polymorphisms and functional characterization of variant allozymes.

Pharmacogenetics 2002 Jan;12(1):11-21

Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Medical School-Mayo Clinic-Mayo Foundation, Rochester, MN 55905, USA.

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January 2002