Publications by authors named "Robert D Burke"

55Publications

Analysis of neural activity with fluorescent protein biosensors.

Methods Cell Biol 2019 3;151:519-526. Epub 2018 Dec 3.

Shimoda Marine Research Center, University of Tsukuba, Shimoda, Shizuoka, Japan.

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http://dx.doi.org/10.1016/bs.mcb.2018.10.010DOI Listing
July 2019

The causes of things.

Authors:
Robert D Burke

Methods Cell Biol 2019 20;151:49-54. Epub 2019 Mar 20.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada. Electronic address:

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http://dx.doi.org/10.1016/bs.mcb.2019.03.007DOI Listing
July 2019

Embryonic neurogenesis in echinoderms.

Wiley Interdiscip Rev Dev Biol 2018 07 22;7(4):e316. Epub 2018 Feb 22.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://dx.doi.org/10.1002/wdev.316DOI Listing
July 2018

Transforming a transcription factor.

Authors:
Robert D Burke

Elife 2018 01 8;7. Epub 2018 Jan 8.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://dx.doi.org/10.7554/eLife.33792DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5758108PMC
January 2018

Notch signaling patterns neurogenic ectoderm and regulates the asymmetric division of neural progenitors in sea urchin embryos.

Development 2017 10 29;144(19):3602-3611. Epub 2017 Aug 29.

Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada V8W 2Y2

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http://dx.doi.org/10.1242/dev.151720DOI Listing
October 2017

Eph and Ephrin function in dispersal and epithelial insertion of pigmented immunocytes in sea urchin embryos.

Elife 2016 07 30;5. Epub 2016 Jul 30.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://dx.doi.org/10.7554/eLife.16000DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4996649PMC
July 2016

Characterization of Calflagin, a Flagellar Calcium-Binding Protein from Trypanosoma congolense.

PLoS Negl Trop Dis 2016 Apr 7;10(4):e0004510. Epub 2016 Apr 7.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada.

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http://dx.doi.org/10.1371/journal.pntd.0004510DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824491PMC
April 2016

Neurogenesis in sea urchin embryos and the diversity of deuterostome neurogenic mechanisms.

Development 2016 Jan 28;143(2):286-97. Epub 2015 Oct 28.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6

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http://dx.doi.org/10.1242/dev.124503DOI Listing
January 2016

Sea urchin neural development and the metazoan paradigm of neurogenesis.

Genesis 2014 Mar;52(3):208-21

Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC Canada.

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http://dx.doi.org/10.1002/dvg.22750DOI Listing
March 2014

Imaging neural development in embryonic and larval sea urchins.

Methods Mol Biol 2014 ;1128:147-60

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://dx.doi.org/10.1007/978-1-62703-974-1_9DOI Listing
October 2014

Eph-Ephrin signaling and focal adhesion kinase regulate actomyosin-dependent apical constriction of ciliary band cells.

Development 2014 Mar;141(5):1075-84

Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.

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http://dx.doi.org/10.1242/dev.100123DOI Listing
March 2014

Neural development in Eucidaris tribuloides and the evolutionary history of the echinoid larval nervous system.

Dev Biol 2013 May 16;377(1):236-44. Epub 2013 Mar 16.

Department of Biology, St. Francis-Xavier University, Antigonish, NS, Canada.

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https://linkinghub.elsevier.com/retrieve/pii/S00121606130013
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http://dx.doi.org/10.1016/j.ydbio.2013.03.006DOI Listing
May 2013

An effective polymer cross-linking strategy to obtain stable dispersions of upconverting NaYF4 nanoparticles in buffers and biological growth media for biolabeling applications.

Langmuir 2012 Feb 2;28(6):3239-47. Epub 2012 Feb 2.

Department of Physics, University of Science and Technology of China, Hefei 230026, China.

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http://dx.doi.org/10.1021/la204020mDOI Listing
February 2012

Machine vision-based localization of nucleic and cytoplasmic injection sites on low-contrast adherent cells.

Med Biol Eng Comput 2012 Jan 27;50(1):11-21. Epub 2011 Sep 27.

Mechatronics Systems Engineering, School of Engineering Science, Simon Fraser University, Surrey, BC, Canada.

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http://link.springer.com/10.1007/s11517-011-0831-2
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http://dx.doi.org/10.1007/s11517-011-0831-2DOI Listing
January 2012

The evolution of nervous system patterning: insights from sea urchin development.

Development 2011 Sep;138(17):3613-23

National Institute for Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD 20892, USA.

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http://dev.biologists.org/cgi/doi/10.1242/dev.058172
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http://dx.doi.org/10.1242/dev.058172DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3152920PMC
September 2011

Deuterostome neuroanatomy and the body plan paradox.

Authors:
Robert D Burke

Evol Dev 2011 Jan-Feb;13(1):110-5

Department of Biochemistry and Microbiology, University of Victoria, Petch 207, 3800 Finnerty Road, Victoria, BC, Canada V8N 3N5.

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http://dx.doi.org/10.1111/j.1525-142X.2010.00460.xDOI Listing
April 2011

TGFβ signaling positions the ciliary band and patterns neurons in the sea urchin embryo.

Dev Biol 2010 Nov 12;347(1):71-81. Epub 2010 Aug 12.

Shimoda Marine Research Center, University of Tsukuba, Japan.

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http://dx.doi.org/10.1016/j.ydbio.2010.08.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2950233PMC
November 2010

Pl-nectin, a discoidin family member, is a ligand for betaC integrins in the sea urchin embryo.

Matrix Biol 2010 Jun 14;29(5):341-5. Epub 2010 Feb 14.

Consiglio Nazionale delle Ricerche, Istituto di Biomedicina e Immunologia Molecolare Alberto Monroy, Via Ugo La Malfa 153, Palermo, Italy.

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http://dx.doi.org/10.1016/j.matbio.2010.02.005DOI Listing
June 2010

RoboSCell: an automated single cell arraying and analysis instrument.

Biomed Microdevices 2009 Dec;11(6):1317-30

Mechatronic Systems Engineering, School of Engineering Science, Simon Fraser University, Central City Galleria 4 4274, Surrey, BC, Canada.

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http://dx.doi.org/10.1007/s10544-009-9351-3DOI Listing
December 2009

Development of an autonomous biological cell manipulator with single-cell electroporation and visual servoing capabilities.

IEEE Trans Biomed Eng 2009 Aug;56(8):2064-74

University of Victoria, Victoria, BC, Canada.

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http://dx.doi.org/10.1109/TBME.2009.2021577DOI Listing
August 2009

Neural development of the brittlestar Amphiura filiformis.

Dev Genes Evol 2009 Mar 24;219(3):159-66. Epub 2009 Feb 24.

Sven Lovén Centre for Marine Sciences, Kristineberg, 450 34, Fiskebäckskil, Sweden.

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http://dx.doi.org/10.1007/s00427-009-0277-9DOI Listing
March 2009

The molecular phylogeny of eph receptors and ephrin ligands.

BMC Cell Biol 2008 May 21;9:27. Epub 2008 May 21.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://dx.doi.org/10.1186/1471-2121-9-27DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2405795PMC
May 2008

Divergent roles for Eph and ephrin in avian cranial neural crest.

BMC Dev Biol 2008 May 21;8:56. Epub 2008 May 21.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://bmcdevbiol.biomedcentral.com/articles/10.1186/1471-21
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http://dx.doi.org/10.1186/1471-213X-8-56DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2405773PMC
May 2008

Neural architecture of the brachiolaria larva of the starfish, Asterina pectinifera.

J Comp Neurol 2008 Jul;509(3):271-82

Department of Biology, Keio University, Yokohama 223-8521, Japan.

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http://dx.doi.org/10.1002/cne.21742DOI Listing
July 2008

Identification, characterization and deduced amino acid sequence of the dominant protease from Kudoa paniformis and K. thyrsites: a unique cytoplasmic cysteine protease.

Comp Biochem Physiol B Biochem Mol Biol 2008 Mar 4;149(3):477-89. Epub 2007 Dec 4.

BC Centre for Aquatic Health Sciences, 621 Island Hwy, PO Box 277, Campbell River, BC Canada V9W 5B1.

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http://dx.doi.org/10.1016/j.cbpb.2007.11.011DOI Listing
March 2008

ARS2 is a conserved eukaryotic gene essential for early mammalian development.

Mol Cell Biol 2008 Mar 17;28(5):1503-14. Epub 2007 Dec 17.

Centre for Biomedical Research, University of Victoria, P.O. Box 3020 Station CSC, Victoria, BC, Canada.

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http://dx.doi.org/10.1128/MCB.01565-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2258792PMC
March 2008

Apical organs in echinoderm larvae: insights into larval evolution in the Ambulacraria.

Evol Dev 2007 Sep-Oct;9(5):432-45

Department of Anatomy and Histology, F13, University of Sydney, NSW 2006, Australia.

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http://dx.doi.org/10.1111/j.1525-142X.2007.00189.xDOI Listing
December 2007

An ectromelia virus profilin homolog interacts with cellular tropomyosin and viral A-type inclusion protein.

Virol J 2007 Jul 24;4:76. Epub 2007 Jul 24.

Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada.

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http://dx.doi.org/10.1186/1743-422X-4-76DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1964790PMC
July 2007

Ontogeny of the holothurian larval nervous system: evolution of larval forms.

Dev Genes Evol 2007 Aug 11;217(8):585-92. Epub 2007 Jul 11.

Kewalo Marine Laboratory, University of Hawaii, Honolulu, HI, USA.

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http://dx.doi.org/10.1007/s00427-007-0169-9DOI Listing
August 2007

Identification and structural basis of binding to host lung glycogen by streptococcal virulence factors.

Nat Struct Mol Biol 2007 Jan 24;14(1):76-84. Epub 2006 Dec 24.

Biochemistry & Microbiology, University of Victoria, PO Box 3055 STN CSC, Victoria, British Columbia, V8W 3P6, Canada.

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http://dx.doi.org/10.1038/nsmb1187DOI Listing
January 2007

Sp-Smad2/3 mediates patterning of neurogenic ectoderm by nodal in the sea urchin embryo.

Dev Biol 2007 Feb 10;302(2):494-503. Epub 2006 Oct 10.

Department of Biology, University of Victoria, Victoria, POB 3020, STN CSC, 3800 Finnerty Rd, Victoria, BC, Canada V8W 3N5.

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http://dx.doi.org/10.1016/j.ydbio.2006.10.010DOI Listing
February 2007

The genome of the sea urchin Strongylocentrotus purpuratus.

Authors:
Erica Sodergren George M Weinstock Eric H Davidson R Andrew Cameron Richard A Gibbs Robert C Angerer Lynne M Angerer Maria Ina Arnone David R Burgess Robert D Burke James A Coffman Michael Dean Maurice R Elphick Charles A Ettensohn Kathy R Foltz Amro Hamdoun Richard O Hynes William H Klein William Marzluff David R McClay Robert L Morris Arcady Mushegian Jonathan P Rast L Courtney Smith Michael C Thorndyke Victor D Vacquier Gary M Wessel Greg Wray Lan Zhang Christine G Elsik Olga Ermolaeva Wratko Hlavina Gretchen Hofmann Paul Kitts Melissa J Landrum Aaron J Mackey Donna Maglott Georgia Panopoulou Albert J Poustka Kim Pruitt Victor Sapojnikov Xingzhi Song Alexandre Souvorov Victor Solovyev Zheng Wei Charles A Whittaker Kim Worley K James Durbin Yufeng Shen Olivier Fedrigo David Garfield Ralph Haygood Alexander Primus Rahul Satija Tonya Severson Manuel L Gonzalez-Garay Andrew R Jackson Aleksandar Milosavljevic Mark Tong Christopher E Killian Brian T Livingston Fred H Wilt Nikki Adams Robert Bellé Seth Carbonneau Rocky Cheung Patrick Cormier Bertrand Cosson Jenifer Croce Antonio Fernandez-Guerra Anne-Marie Genevière Manisha Goel Hemant Kelkar Julia Morales Odile Mulner-Lorillon Anthony J Robertson Jared V Goldstone Bryan Cole David Epel Bert Gold Mark E Hahn Meredith Howard-Ashby Mark Scally John J Stegeman Erin L Allgood Jonah Cool Kyle M Judkins Shawn S McCafferty Ashlan M Musante Robert A Obar Amanda P Rawson Blair J Rossetti Ian R Gibbons Matthew P Hoffman Andrew Leone Sorin Istrail Stefan C Materna Manoj P Samanta Viktor Stolc Waraporn Tongprasit Qiang Tu Karl-Frederik Bergeron Bruce P Brandhorst James Whittle Kevin Berney David J Bottjer Cristina Calestani Kevin Peterson Elly Chow Qiu Autumn Yuan Eran Elhaik Dan Graur Justin T Reese Ian Bosdet Shin Heesun Marco A Marra Jacqueline Schein Michele K Anderson Virginia Brockton Katherine M Buckley Avis H Cohen Sebastian D Fugmann Taku Hibino Mariano Loza-Coll Audrey J Majeske Cynthia Messier Sham V Nair Zeev Pancer David P Terwilliger Cavit Agca Enrique Arboleda Nansheng Chen Allison M Churcher F Hallböök Glen W Humphrey Mohammed M Idris Takae Kiyama Shuguang Liang Dan Mellott Xiuqian Mu Greg Murray Robert P Olinski Florian Raible Matthew Rowe John S Taylor Kristin Tessmar-Raible D Wang Karen H Wilson Shunsuke Yaguchi Terry Gaasterland Blanca E Galindo Herath J Gunaratne Celina Juliano Masashi Kinukawa Gary W Moy Anna T Neill Mamoru Nomura Michael Raisch Anna Reade Michelle M Roux Jia L Song Yi-Hsien Su Ian K Townley Ekaterina Voronina Julian L Wong Gabriele Amore Margherita Branno Euan R Brown Vincenzo Cavalieri Véronique Duboc Louise Duloquin Constantin Flytzanis Christian Gache François Lapraz Thierry Lepage Annamaria Locascio Pedro Martinez Giorgio Matassi Valeria Matranga Ryan Range Francesca Rizzo Eric Röttinger Wendy Beane Cynthia Bradham Christine Byrum Tom Glenn Sofia Hussain Gerard Manning Esther Miranda Rebecca Thomason Katherine Walton Athula Wikramanayke Shu-Yu Wu Ronghui Xu C Titus Brown Lili Chen Rachel F Gray Pei Yun Lee Jongmin Nam Paola Oliveri Joel Smith Donna Muzny Stephanie Bell Joseph Chacko Andrew Cree Stacey Curry Clay Davis Huyen Dinh Shannon Dugan-Rocha Jerry Fowler Rachel Gill Cerrissa Hamilton Judith Hernandez Sandra Hines Jennifer Hume Laronda Jackson Angela Jolivet Christie Kovar Sandra Lee Lora Lewis George Miner Margaret Morgan Lynne V Nazareth Geoffrey Okwuonu David Parker Ling-Ling Pu Rachel Thorn Rita Wright

Science 2006 Nov;314(5801):941-52

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http://dx.doi.org/10.1126/science.1133609DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3159423PMC
November 2006

Blood group antigen recognition by a Streptococcus pneumoniae virulence factor.

J Biol Chem 2006 Nov 20;281(46):35263-71. Epub 2006 Sep 20.

Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia V8W 3P6, Canada.

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http://dx.doi.org/10.1074/jbc.M607620200DOI Listing
November 2006

The echinoderm adhesome.

Dev Biol 2006 Dec 7;300(1):252-66. Epub 2006 Aug 7.

Center for Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

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http://dx.doi.org/10.1016/j.ydbio.2006.07.044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3565218PMC
December 2006

Virulence of Francisella spp. in chicken embryos.

Infect Immun 2006 Aug;74(8):4809-16

Department of Biochemistry and Microbiology, PO Box 3055 STN CSC, University of Victoria, Victoria, British Columbia, V8W 3P6, Canada.

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http://dx.doi.org/10.1128/IAI.00034-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1539577PMC
August 2006

Specification of ectoderm restricts the size of the animal plate and patterns neurogenesis in sea urchin embryos.

Development 2006 Jun 10;133(12):2337-46. Epub 2006 May 10.

Department of Biology, University of Victoria, POB 3020, STN CSC, Victoria, BC, V8W 3N5, Canada.

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http://dx.doi.org/10.1242/dev.02396DOI Listing
June 2006

Neuron-specific expression of a synaptotagmin gene in the sea urchin Strongylocentrotus purpuratus.

J Comp Neurol 2006 May;496(2):244-51

Department of Biology and Biochemistry, University of Victoria, Victoria, British Columbia V8W 3N5, Canada.

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http://dx.doi.org/10.1002/cne.20939DOI Listing
May 2006

Bioconjugation of Ln3+-doped LaF3 nanoparticles to avidin.

Langmuir 2006 Feb;22(4):1782-8

University of Victoria, Department of Chemistry, P.O. Box 3065, Victoria, British Columbia, Canada V8W 3V6.

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http://dx.doi.org/10.1021/la052589rDOI Listing
February 2006

Embryonic expression of engrailed in sea urchins.

Gene Expr Patterns 2006 Jun 30;6(5):566-71. Epub 2006 Jan 30.

Department of Biology, University of Victoria, 3800 Finnerty Road, Victoria, BC, Canada.

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http://dx.doi.org/10.1016/j.modgep.2005.10.004DOI Listing
June 2006

TEM and SEM methods.

Methods Cell Biol 2004 ;74:411-41

Department of Anatomy and Cell Biology, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.

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http://dx.doi.org/10.1016/s0091-679x(04)74017-0DOI Listing
February 2005

Divergent patterns of neural development in larval echinoids and asteroids.

Evol Dev 2004 Mar-Apr;6(2):95-104

Department of Biology, Keio University, Yokohama 223-8521, Japan.

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http://dx.doi.org/10.1111/j.1525-142x.2004.04011.xDOI Listing
October 2004

Integrins on eggs: the betaC subunit is essential for formation of the cortical actin cytoskeleton in sea urchin eggs.

Dev Biol 2004 Jan;265(1):53-60

Departments of Biology and Biochemistry/Microbiology, University of Victoria, Victoria, BC, Canada.

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http://dx.doi.org/10.1016/j.ydbio.2003.09.025DOI Listing
January 2004

SpADAM, a sea urchin ADAM, has conserved structure and expression.

Mech Dev 2002 Sep;117(1-2):275-81

Department of Biology, University of Victoria, Victoria, BC, Canada.

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http://dx.doi.org/10.1016/s0925-4773(02)00179-xDOI Listing
September 2002

Mechanisms of arm-tip regeneration in the sea star, Leptasterias hexactis.

Rouxs Arch Dev Biol 1989 May;198(1):19-28

Department of Biology, University of Victoria, V8W 2Y2, Victoria, B.C., Canada.

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http://dx.doi.org/10.1007/BF00376366DOI Listing
May 1989

The structure of the larval nervous system of Pisaster ochraceus (Echinodermata: Asteroidea).

Authors:
Robert D Burke

J Morphol 1983 Oct;178(1):23-35

Department of Biology, University of Victoria, Victoria, B.C., Canada V8W 2Y2, and Bamfield Marine Station, Bamfield, B.C., Canada V0R 1B0.

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http://dx.doi.org/10.1002/jmor.1051780103DOI Listing
October 1983