Rhona Stuart

Rhona Stuart

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Rhona Stuart

Rhona Stuart

Publications by authors named "Rhona Stuart"

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Selective collection of iron-rich dust particles by natural Trichodesmium colonies.

ISME J 2019 Sep 24. Epub 2019 Sep 24.

The Fredy and Nadine Herrmann Institute of Earth Sciences, Edmond J. Safra Campus, Givat Ram, Hebrew University of Jerusalem, Jerusalem, Israel.

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http://dx.doi.org/10.1038/s41396-019-0505-xDOI Listing
September 2019

Reaction of O with a diiron protein generates a mixed-valent Fe/Fe center and peroxide.

Proc Natl Acad Sci U S A 2019 02 18;116(6):2058-2067. Epub 2019 Jan 18.

Centre for Molecular and Structural Biochemistry, School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom;

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http://dx.doi.org/10.1073/pnas.1809913116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369749PMC
February 2019

Pervasive iron limitation at subsurface chlorophyll maxima of the California Current.

Proc Natl Acad Sci U S A 2018 12 10;115(52):13300-13305. Epub 2018 Dec 10.

Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093;

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http://dx.doi.org/10.1073/pnas.1813192115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6310781PMC
December 2018

Copper toxicity response influences mesotrophic Synechococcus community structure.

Environ Microbiol 2017 02 26;19(2):756-769. Epub 2017 Jan 26.

Scripps Institution of Oceanography, University of California at San Diego, La Jolla, CA, USA.

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http://doi.wiley.com/10.1111/1462-2920.13630
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http://dx.doi.org/10.1111/1462-2920.13630DOI Listing
February 2017

Cyanobacterial reuse of extracellular organic carbon in microbial mats.

ISME J 2016 May 23;10(5):1240-51. Epub 2015 Oct 23.

Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.

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http://dx.doi.org/10.1038/ismej.2015.180DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5029224PMC
May 2016

Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress.

ISME J 2013 Jun 24;7(6):1139-49. Epub 2013 Jan 24.

Scripps Institution of Oceanography, University of California at San Diego, La Jolla, CA 92093-0202, USA.

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http://dx.doi.org/10.1038/ismej.2012.175DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3660668PMC
June 2013

Computational prediction of the osmoregulation network in Synechococcus sp. WH8102.

BMC Genomics 2010 May 10;11:291. Epub 2010 May 10.

Department of Biochemistry and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA.

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http://dx.doi.org/10.1186/1471-2164-11-291DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2874817PMC
May 2010

Coastal strains of marine Synechococcus species exhibit increased tolerance to copper shock and a distinctive transcriptional response relative to those of open-ocean strains.

Appl Environ Microbiol 2009 Aug 5;75(15):5047-57. Epub 2009 Jun 5.

Scripps Institute of Oceanography, University of California, San Diego, La Jolla, 92093, USA.

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http://dx.doi.org/10.1128/AEM.00271-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2725496PMC
August 2009

Genome-wide mapping of allele-specific protein-DNA interactions in human cells.

Nat Methods 2008 Apr 16;5(4):307-9. Epub 2008 Mar 16.

Ludwig Institute for Cancer Research, University of California, San Diego, 9500 Gilman Ave., La Jolla, California 92037, USA.

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http://dx.doi.org/10.1038/nmeth.1194DOI Listing
April 2008

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:
Ewan Birney John A Stamatoyannopoulos Anindya Dutta Roderic Guigó Thomas R Gingeras Elliott H Margulies Zhiping Weng Michael Snyder Emmanouil T Dermitzakis Robert E Thurman Michael S Kuehn Christopher M Taylor Shane Neph Christoph M Koch Saurabh Asthana Ankit Malhotra Ivan Adzhubei Jason A Greenbaum Robert M Andrews Paul Flicek Patrick J Boyle Hua Cao Nigel P Carter Gayle K Clelland Sean Davis Nathan Day Pawandeep Dhami Shane C Dillon Michael O Dorschner Heike Fiegler Paul G Giresi Jeff Goldy Michael Hawrylycz Andrew Haydock Richard Humbert Keith D James Brett E Johnson Ericka M Johnson Tristan T Frum Elizabeth R Rosenzweig Neerja Karnani Kirsten Lee Gregory C Lefebvre Patrick A Navas Fidencio Neri Stephen C J Parker Peter J Sabo Richard Sandstrom Anthony Shafer David Vetrie Molly Weaver Sarah Wilcox Man Yu Francis S Collins Job Dekker Jason D Lieb Thomas D Tullius Gregory E Crawford Shamil Sunyaev William S Noble Ian Dunham France Denoeud Alexandre Reymond Philipp Kapranov Joel Rozowsky Deyou Zheng Robert Castelo Adam Frankish Jennifer Harrow Srinka Ghosh Albin Sandelin Ivo L Hofacker Robert Baertsch Damian Keefe Sujit Dike Jill Cheng Heather A Hirsch Edward A Sekinger Julien Lagarde Josep F Abril Atif Shahab Christoph Flamm Claudia Fried Jörg Hackermüller Jana Hertel Manja Lindemeyer Kristin Missal Andrea Tanzer Stefan Washietl Jan Korbel Olof Emanuelsson Jakob S Pedersen Nancy Holroyd Ruth Taylor David Swarbreck Nicholas Matthews Mark C Dickson Daryl J Thomas Matthew T Weirauch James Gilbert Jorg Drenkow Ian Bell XiaoDong Zhao K G Srinivasan Wing-Kin Sung Hong Sain Ooi Kuo Ping Chiu Sylvain Foissac Tyler Alioto Michael Brent Lior Pachter Michael L Tress Alfonso Valencia Siew Woh Choo Chiou Yu Choo Catherine Ucla Caroline Manzano Carine Wyss Evelyn Cheung Taane G Clark James B Brown Madhavan Ganesh Sandeep Patel Hari Tammana Jacqueline Chrast Charlotte N Henrichsen Chikatoshi Kai Jun Kawai Ugrappa Nagalakshmi Jiaqian Wu Zheng Lian Jin Lian Peter Newburger Xueqing Zhang Peter Bickel John S Mattick Piero Carninci Yoshihide Hayashizaki Sherman Weissman Tim Hubbard Richard M Myers Jane Rogers Peter F Stadler Todd M Lowe Chia-Lin Wei Yijun Ruan Kevin Struhl Mark Gerstein Stylianos E Antonarakis Yutao Fu Eric D Green Ulaş Karaöz Adam Siepel James Taylor Laura A Liefer Kris A Wetterstrand Peter J Good Elise A Feingold Mark S Guyer Gregory M Cooper George Asimenos Colin N Dewey Minmei Hou Sergey Nikolaev Juan I Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham Haiyan Huang Nancy R Zhang Ian Holmes James C Mullikin Abel Ureta-Vidal Benedict Paten Michael Seringhaus Deanna Church Kate Rosenbloom W James Kent Eric A Stone Serafim Batzoglou Nick Goldman Ross C Hardison David Haussler Webb Miller Arend Sidow Nathan D Trinklein Zhengdong D Zhang Leah Barrera Rhona Stuart David C King Adam Ameur Stefan Enroth Mark C Bieda Jonghwan Kim Akshay A Bhinge Nan Jiang Jun Liu Fei Yao Vinsensius B Vega Charlie W H Lee Patrick Ng Atif Shahab Annie Yang Zarmik Moqtaderi Zhou Zhu Xiaoqin Xu Sharon Squazzo Matthew J Oberley David Inman Michael A Singer Todd A Richmond Kyle J Munn Alvaro Rada-Iglesias Ola Wallerman Jan Komorowski Joanna C Fowler Phillippe Couttet Alexander W Bruce Oliver M Dovey Peter D Ellis Cordelia F Langford David A Nix Ghia Euskirchen Stephen Hartman Alexander E Urban Peter Kraus Sara Van Calcar Nate Heintzman Tae Hoon Kim Kun Wang Chunxu Qu Gary Hon Rosa Luna Christopher K Glass M Geoff Rosenfeld Shelley Force Aldred Sara J Cooper Anason Halees Jane M Lin Hennady P Shulha Xiaoling Zhang Mousheng Xu Jaafar N S Haidar Yong Yu Yijun Ruan Vishwanath R Iyer Roland D Green Claes Wadelius Peggy J Farnham Bing Ren Rachel A Harte Angie S Hinrichs Heather Trumbower Hiram Clawson Jennifer Hillman-Jackson Ann S Zweig Kayla Smith Archana Thakkapallayil Galt Barber Robert M Kuhn Donna Karolchik Lluis Armengol Christine P Bird Paul I W de Bakker Andrew D Kern Nuria Lopez-Bigas Joel D Martin Barbara E Stranger Abigail Woodroffe Eugene Davydov Antigone Dimas Eduardo Eyras Ingileif B Hallgrímsdóttir Julian Huppert Michael C Zody Gonçalo R Abecasis Xavier Estivill Gerard G Bouffard Xiaobin Guan Nancy F Hansen Jacquelyn R Idol Valerie V B Maduro Baishali Maskeri Jennifer C McDowell Morgan Park Pamela J Thomas Alice C Young Robert W Blakesley Donna M Muzny Erica Sodergren David A Wheeler Kim C Worley Huaiyang Jiang George M Weinstock Richard A Gibbs Tina Graves Robert Fulton Elaine R Mardis Richard K Wilson Michele Clamp James Cuff Sante Gnerre David B Jaffe Jean L Chang Kerstin Lindblad-Toh Eric S Lander Maxim Koriabine Mikhail Nefedov Kazutoyo Osoegawa Yuko Yoshinaga Baoli Zhu Pieter J de Jong
June 2007

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Nat Genet 2007 Mar 4;39(3):311-8. Epub 2007 Feb 4.

Ludwig Institute for Cancer Research, University of California San Diego (UCSD) School of Medicine, 9500 Gilman Drive, La Jolla, California 92093-0653 USA.

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http://dx.doi.org/10.1038/ng1966DOI Listing
March 2007