Publications by authors named "Rex L Chisholm"

60Publications

Genomic Medicine Year in Review: 2019.

Am J Hum Genet 2019 12 5;105(6):1072-1075. Epub 2019 Dec 5.

National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.

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December 2019

The phenotypic legacy of admixture between modern humans and Neandertals.

Science 2016 Feb;351(6274):737-41

Vanderbilt Genetics Institute, Vanderbilt University, Nashville, TN, USA. Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA. Department of Biological Sciences, Vanderbilt University, Nashville, TN, USA. Center for Quantitative Sciences, Vanderbilt University, Nashville, TN, USA.

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February 2016

Data Safe Havens in health research and healthcare.

Bioinformatics 2015 Oct 25;31(20):3241-8. Epub 2015 Jun 25.

Public Population Project in Genomics and Society (PG), Montreal, QC H3A 0G1, Canada, Centre of Genomics and Policy, McGill University, Montreal, QC H3A 0G1, Canada.

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October 2015

dictyBase 2015: Expanding data and annotations in a new software environment.

Genesis 2015 Aug 8;53(8):523-534. Epub 2015 Jul 8.

dictyBase, Northwestern University Biomedical Informatics Center and Center for Genetic Medicine, 750 N. Lake Shore Drive, Chicago, IL 60611, USA.

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August 2015

At the Interface between Medical Informatics and Personalized Medicine: The eMERGE Network Experience.

Authors:
Rex L Chisholm

Healthc Inform Res 2013 Jun;19(2):67-8

Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.

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June 2013

One stop shop for everything Dictyostelium: dictyBase and the Dicty Stock Center in 2012.

Methods Mol Biol 2013 ;983:59-92

dictyBase and the Dicty Stock Center, Center for Genetic Medicine, Northwestern University, Chicago, IL, USA.

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August 2013

DictyBase 2013: integrating multiple Dictyostelid species.

Nucleic Acids Res 2013 Jan 20;41(Database issue):D676-83. Epub 2012 Nov 20.

Biomedical Informatics Center and Center for Genetic Medicine, Northwestern Univesity, Feinberg School of Medicine, 750 North Lake Shore Drive, Chicago, IL 60611, USA.

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January 2013

Spliceosomal genes in the D. discoideum genome: a comparison with those in H. sapiens, D. melanogaster, A. thaliana and S. cerevisiae.

Protein Cell 2011 May 12;2(5):395-409. Epub 2011 Jun 12.

Department of Molecular and Clinical Genetics, Royal Prince Alfred Hospital and Sydney Medical School (Central), the University of Sydney, Australia.

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May 2011

Uncovering a role for the tail of the Dictyostelium discoideum SadA protein in cell-substrate adhesion.

Eukaryot Cell 2011 May 25;10(5):662-71. Epub 2011 Mar 25.

Integrated Graduate Program in the Life Sciences, Northwestern University, Chicago, IL 60611, USA.

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May 2011

dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa.

Nucleic Acids Res 2011 Jan 17;39(Database issue):D620-4. Epub 2010 Nov 17.

dictyBase, Northwestern University Biomedical Informatics Center and Center for Genetic Medicine, 420 E Superior St, Chicago, IL 60611, USA.

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January 2011

Nonmuscle myosin IIA with a GFP fused to the N-terminus of the regulatory light chain is regulated normally.

J Muscle Res Cell Motil 2010 Sep 14;31(3):163-70. Epub 2010 Aug 14.

Laboratory of Molecular Physiology, National Heart, Lung and Blood Institute, National Institutes of Health, Building 50, Room 3523, Bethesda, MD 20892, USA.

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September 2010

Annotating the human genome with Disease Ontology.

BMC Genomics 2009 Jul 7;10 Suppl 1:S6. Epub 2009 Jul 7.

Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, USA.

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July 2009

dictyBase--a Dictyostelium bioinformatics resource update.

Nucleic Acids Res 2009 Jan 30;37(Database issue):D515-9. Epub 2008 Oct 30.

dictyBase, Northwestern University Biomedical Informatics Center and Center for Genetic Medicine, Chicago, IL 60611, USA.

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January 2009

An anatomy ontology to represent biological knowledge in Dictyostelium discoideum.

BMC Genomics 2008 Mar 18;9:130. Epub 2008 Mar 18.

dictyBase, Northwestern University, Center for Genetic Medicine, 676 N, St, Clair, Chicago, IL 60611, USA.

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March 2008

A general purpose method for extracting RNA from Dictyostelium cells.

Nat Protoc 2007 ;2(6):1329-32

dictyBase, Center for Genetic Medicine, Northwestern University, 676 North Saint Clair Street Suite 1260, Chicago, Illinois 60611, USA.

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August 2007

A reliable general purpose method for extracting genomic DNA from Dictyostelium cells.

Nat Protoc 2007 ;2(6):1325-8

dictyBase, Center for Genetic Medicine, Northwestern University, 676 North Saint Clair Street Suite 1260, Chicago, Illinois 60611, USA.

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August 2007

Transformation of Dictyostelium discoideum with plasmid DNA.

Nat Protoc 2007 ;2(6):1317-24

dictyBase, Center for Genetic Medicine, Northwestern University, 676 North Saint Clair Street Suite 1260, Chicago, Illinois 60611, USA.

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August 2007

Protocols for growth and development of Dictyostelium discoideum.

Nat Protoc 2007 ;2(6):1307-16

dictyBase, Center for Genetic Medicine, Northwestern University, 676 North Saint Clair Street, Suite 1260, Chicago, Illinois 60611, USA.

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August 2007

Xanthusbase: adapting wikipedia principles to a model organism database.

Nucleic Acids Res 2007 Jan 7;35(Database issue):D422-6. Epub 2006 Nov 7.

Department of Biology, Syracuse University, Syracuse, NY 13244, USA.

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January 2007

dictyBase and the Dicty Stock Center.

Methods Mol Biol 2006 ;346:51-74

dictyBase, Center for Genetic Medicine, Northwestern University, Chicago, IL, USA.

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October 2006

dictyBase, the model organism database for Dictyostelium discoideum.

Nucleic Acids Res 2006 Jan;34(Database issue):D423-7

dictyBase, Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.

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January 2006

Insights into morphogenesis from a simple developmental system.

Nat Rev Mol Cell Biol 2004 Jul;5(7):531-41

Cell and Molecular Biology, Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University, 303 East Chicago Avenue, Chicago, Illinois 60611, USA.

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July 2004

dictyBase: a new Dictyostelium discoideum genome database.

Nucleic Acids Res 2004 Jan;32(Database issue):D332-3

Laboratory of Cellular and Developmental Biology (50/3351), National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-8028, USA.

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January 2004

SadA, a novel adhesion receptor in Dictyostelium.

J Cell Biol 2002 Dec 23;159(6):1109-19. Epub 2002 Dec 23.

Department of Cell and Molecular Biology, Northwestern University Medical School, Chicago, IL 60611, USA.

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December 2002

Cytoplasmic dynein-associated structures move bidirectionally in vivo.

J Cell Sci 2002 Apr;115(Pt 7):1453-60

Department of Cell and Molecular Biology, Robert H. Lurie Comprehensive Cancer Center, and Center for Genetic Medicine, Northwestern University Medical School, Chicago, Illinois 60611, USA.

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April 2002

A fluorescent resonant energy transfer-based biosensor reveals transient and regional myosin light chain kinase activation in lamella and cleavage furrows.

J Cell Biol 2002 Feb 28;156(3):543-53. Epub 2002 Jan 28.

Department of Cell and Molecular Biology, R.H. Lurie Comprehensive Cancer Center and Center for Genetic Medicine, Northwestern University Medical School, Chicago, IL 60611, USA.

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February 2002