Reija Autio

Reija Autio

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Reija Autio

Reija Autio

Publications by authors named "Reija Autio"

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31Publications

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In-vitro dissolution characteristics and human adipose stem cell response to novel borophosphate glasses.

J Biomed Mater Res A 2019 Sep 23;107(9):2099-2114. Epub 2019 May 23.

Laboratory of Biomaterials and Tissue Engineering, Faculty of Medicine and Health Technology and BioMediTech Institute, Tampere University, Tampere, Finland.

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http://dx.doi.org/10.1002/jbm.a.36722DOI Listing
September 2019

Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples.

BMC Genomics 2017 05 15;18(1):378. Epub 2017 May 15.

Department of Pediatrics, 2nd Faculty of Medicine, Charles University and University Hospital Motol, V Úvalu 84, 150 06, Praha 5, Czech Republic.

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http://dx.doi.org/10.1186/s12864-017-3721-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5430618PMC
May 2017

Effects of muscular dystrophy, exercise and blocking activin receptor IIB ligands on the unfolded protein response and oxidative stress.

Free Radic Biol Med 2016 10 20;99:308-322. Epub 2016 Aug 20.

Institute of Biomedicine, Physiology, University of Eastern Finland, Yliopistonranta 1 E, 70210 Kuopio, Finland.

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http://dx.doi.org/10.1016/j.freeradbiomed.2016.08.017DOI Listing
October 2016

Adipose Tissue Dysfunction and Altered Systemic Amino Acid Metabolism Are Associated with Non-Alcoholic Fatty Liver Disease.

PLoS One 2015 6;10(10):e0138889. Epub 2015 Oct 6.

Department of Health Sciences, University of Jyvaskyla, Jyvaskyla, Finland; Department of Medical Rehabilitation, Oulu University Hospital, Oulu, Finland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0138889PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4595021PMC
June 2016

Bone Morphogenetic Protein-2 Induces Donor-Dependent Osteogenic and Adipogenic Differentiation in Human Adipose Stem Cells.

Stem Cells Transl Med 2015 Dec 22;4(12):1391-402. Epub 2015 Oct 22.

Adult Stem Cell Research Group, University of Tampere, Tampere, Finland BioMediTech, University of Tampere, Tampere, Finland Science Center, Tampere University Hospital, Tampere, Finland.

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http://dx.doi.org/10.5966/sctm.2015-0042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4675505PMC
December 2015

Changes in global gene expression of Vibrio parahaemolyticus induced by cold- and heat-stress.

BMC Microbiol 2015 Oct 23;15:229. Epub 2015 Oct 23.

Institute of Food Hygiene, Freie Universität Berlin, Berlin, Germany.

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http://dx.doi.org/10.1186/s12866-015-0565-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4618957PMC
October 2015

Bioactive glass ions as strong enhancers of osteogenic differentiation in human adipose stem cells.

Acta Biomater 2015 Jul 18;21:190-203. Epub 2015 Apr 18.

Adult Stem Cell Research Group, University of Tampere, Tampere, Finland; BioMediTech, University of Tampere and Tampere University of Technology, Tampere, Finland; Science Centre, Tampere University Hospital, Tampere, Finland; Science Centre, Tampere University Hospital, Tampere, Finland.

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http://dx.doi.org/10.1016/j.actbio.2015.04.017DOI Listing
July 2015

Toll-like receptor 5 in obesity: the role of gut microbiota and adipose tissue inflammation.

Obesity (Silver Spring) 2015 Mar 22;23(3):581-90. Epub 2015 Jan 22.

Department of Health Sciences, University of Jyväskylä, Jyväskylä, Finland; Department of Medical Microbiology and Immunology, University of Turku, Turku, Finland.

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http://doi.wiley.com/10.1002/oby.20993
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http://dx.doi.org/10.1002/oby.20993DOI Listing
March 2015

Integrative genomics and transcriptomics analysis of human embryonic and induced pluripotent stem cells.

BioData Min 2014 13;7(1):32. Epub 2014 Dec 13.

Department of Information and Computer Science, Aalto University School of Science, Espoo, Finland.

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http://dx.doi.org/10.1186/s13040-014-0032-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4298950PMC
February 2015

Myostatin/activin blocking combined with exercise reconditions skeletal muscle expression profile of mdx mice.

Mol Cell Endocrinol 2015 Jan 7;399:131-42. Epub 2014 Oct 7.

Department of Biology of Physical Activity, Neuromuscular Research Center, University of Jyväskylä, Rautpohjankatu 8, P.O. Box 35, Jyväskylä FI-40014, Finland. Electronic address:

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http://dx.doi.org/10.1016/j.mce.2014.10.001DOI Listing
January 2015

Serum metabolic profiles in overweight and obese women with and without metabolic syndrome.

Diabetol Metab Syndr 2014 Mar 20;6(1):40. Epub 2014 Mar 20.

Department of Health Sciences, University of Jyväskylä, Jyväskylä FIN-40014, Finland.

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http://dx.doi.org/10.1186/1758-5996-6-40DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3998195PMC
March 2014

POMO--Plotting Omics analysis results for Multiple Organisms.

BMC Genomics 2013 Dec 24;14:918. Epub 2013 Dec 24.

Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Luxembourg, Luxembourg.

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http://dx.doi.org/10.1186/1471-2164-14-918DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3880012PMC
December 2013

Both inhibition and enhanced expression of miR-31 lead to reduced migration and invasion of pancreatic cancer cells.

Genes Chromosomes Cancer 2012 Jun 16;51(6):557-68. Epub 2012 Feb 16.

Institute of Biomedical Technology, University of Tampere and Centre for Laboratory Medicine, Tampere University Hospital, Tampere, Finland.

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http://doi.wiley.com/10.1002/gcc.21941
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http://dx.doi.org/10.1002/gcc.21941DOI Listing
June 2012

MED29, a component of the mediator complex, possesses both oncogenic and tumor suppressive characteristics in pancreatic cancer.

Int J Cancer 2011 Dec 25;129(11):2553-65. Epub 2011 Mar 25.

Institute of Medical Technology, University of Tampere and Centre for Laboratory Medicine, Tampere University Hospital, Tampere, Finland.

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http://doi.wiley.com/10.1002/ijc.25924
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http://dx.doi.org/10.1002/ijc.25924DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3118263PMC
December 2011

Comparison of Affymetrix data normalization methods using 6,926 experiments across five array generations.

BMC Bioinformatics 2009 Jan 30;10 Suppl 1:S24. Epub 2009 Jan 30.

Department of Signal Processing, Tampere University of Technology, Tampere, Finland.

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https://bmcbioinformatics.biomedcentral.com/articles/10.1186
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http://dx.doi.org/10.1186/1471-2105-10-S1-S24DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648747PMC
January 2009

Advanced analysis and visualization of gene copy number and expression data.

BMC Bioinformatics 2009 Jan 30;10 Suppl 1:S70. Epub 2009 Jan 30.

Department of Signal Processing, Tampere University of Technology, 33101, Tampere, Finland.

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http://dx.doi.org/10.1186/1471-2105-10-S1-S70DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2648774PMC
January 2009

Integrated gene copy number and expression microarray analysis of gastric cancer highlights potential target genes.

Int J Cancer 2008 Aug;123(4):817-25

Department of Pathology, Haartman Institute and HUSLAB, University of Helsinki and Helsinki University Central Hospital, Helsinki, Finland.

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http://dx.doi.org/10.1002/ijc.23574DOI Listing
August 2008

High-resolution copy number and gene expression microarray analyses of head and neck squamous cell carcinoma cell lines of tongue and larynx.

Genes Chromosomes Cancer 2008 Jun;47(6):500-9

Institute of Biomedicine and Biomedicum Biochip Center, Genome-Scale Biology Research Program, University of Helsinki, Helsinki, Finland.

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http://dx.doi.org/10.1002/gcc.20551DOI Listing
June 2008

Novel genomic aberrations in testicular germ cell tumors by array-CGH, and associated gene expression changes.

Cell Oncol 2006 ;28(5-6):315-26

Department of Cancer Prevention, Institute for Cancer Research, Rikshospitalet-Radiumhospitalet Medical Center, Oslo, Norway.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615958PMC
http://dx.doi.org/10.1155/2006/219786DOI Listing
February 2007

Effects of Herceptin treatment on global gene expression patterns in HER2-amplified and nonamplified breast cancer cell lines.

Oncogene 2004 Jan;23(4):1010-3

Laboratory of Cancer Genetics, Institute of Medical Technology, University of Tampere and Tampere University Hospital, FIN-33520 Tampere, Finland.

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http://research.med.helsinki.fi/sysbio/csb/pubs/herceptin_on
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http://www.nature.com/doifinder/10.1038/sj.onc.1207200
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http://dx.doi.org/10.1038/sj.onc.1207200DOI Listing
January 2004

CGH-Plotter: MATLAB toolbox for CGH-data analysis.

Bioinformatics 2003 Sep;19(13):1714-5

Institute of Signal Processing, Tampere University of Technology, 33101 Finland.

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http://dx.doi.org/10.1093/bioinformatics/btg230DOI Listing
September 2003