Publications by authors named "Reidar Andreson"

16Publications

Primer3_masker: integrating masking of template sequence with primer design software.

Bioinformatics 2018 06;34(11):1937-1938

Department of Bioinformatics, Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1093/bioinformatics/bty036DOI Listing
June 2018

Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi.

Mycorrhiza 2017 Nov 20;27(8):761-773. Epub 2017 Jul 20.

Department of Botany, Institute of Ecology and Earth Sciences, University of Tartu, 40 Lai Str, 51005, Tartu, Estonia.

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http://dx.doi.org/10.1007/s00572-017-0791-yDOI Listing
November 2017

Fast masking of repeated primer binding sites in eukaryotic genomes.

Methods Mol Biol 2015 ;1275:1-16

Department of Bioinformatics, University of Tartu, Riia 23, Tartu, 51010, Estonia.

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http://dx.doi.org/10.1007/978-1-4939-2365-6_1DOI Listing
December 2015

Profile of whole blood gene expression following immune stimulation in a wild passerine.

BMC Genomics 2014 Jun 27;15:533. Epub 2014 Jun 27.

Department of Zoology, Institute of Ecology and Earth Sciences, Tartu University, Vanemuise 46, 51014 Tartu, Estonia.

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http://dx.doi.org/10.1186/1471-2164-15-533DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4092216PMC
June 2014

AIRE activated tissue specific genes have histone modifications associated with inactive chromatin.

Hum Mol Genet 2009 Dec 10;18(24):4699-710. Epub 2009 Sep 10.

Department of Molecular Pathology, Institute of General and Molecular Pathology, Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1093/hmg/ddp433DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2778368PMC
December 2009

Predicting failure rate of PCR in large genomes.

Nucleic Acids Res 2008 Jun 20;36(11):e66. Epub 2008 May 20.

Department of Bioinformatics, Institute of Molecular and Cell Biology, University of Tartu and Estonian Biocentre, Tartu, Estonia.

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http://dx.doi.org/10.1093/nar/gkn290DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2441781PMC
June 2008

Fast masking of repeated primer binding sites in eukaryotic genomes.

Methods Mol Biol 2007 ;402:201-18

Department of Bioinformatics at University of Tartu, Estonia.

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http://dx.doi.org/10.1007/978-1-59745-528-2_10DOI Listing
November 2007

SNPmasker: automatic masking of SNPs and repeats across eukaryotic genomes.

Nucleic Acids Res 2006 Jul;34(Web Server issue):W651-5

Department of Bioinformatics, University of Tartu, Estonia.

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http://dx.doi.org/10.1093/nar/gkl125DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538889PMC
July 2006

GENOMEMASKER package for designing unique genomic PCR primers.

BMC Bioinformatics 2006 Mar 27;7:172. Epub 2006 Mar 27.

Department of Bioinformatics, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1186/1471-2105-7-172DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1450303PMC
March 2006

MultiPLX: automatic grouping and evaluation of PCR primers.

Bioinformatics 2005 Apr 14;21(8):1701-2. Epub 2004 Dec 14.

Department of Bioinformatics, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1093/bioinformatics/bti219DOI Listing
April 2005