Rebecca R Gray

Rebecca R Gray

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Rebecca R Gray

Rebecca R Gray

Publications by authors named "Rebecca R Gray"

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Short communication: phylodynamics analysis of the human immunodeficiency virus type 1 envelope gene in mother and child pairs.

AIDS Res Hum Retroviruses 2015 Sep 23;31(9):913-20. Epub 2015 Jul 23.

1 Laboratorio de Hematologia Genética e Biologia Computacional, Centro de Pesquisa Gonçalo Moniz , Fundação Oswaldo Cruz, Salvador, Bahia, Brazil .

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http://dx.doi.org/10.1089/AID.2014.0352DOI Listing
September 2015

High intrapatient HIV-1 evolutionary rate is associated with CCR5-to-CXCR4 coreceptor switch.

Infect Genet Evol 2013 Oct 11;19:369-77. Epub 2013 May 11.

Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden; Department of Virology, Swedish Institute for Infectious Disease Control, Solna, Sweden. Electronic address:

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http://dx.doi.org/10.1016/j.meegid.2013.05.004DOI Listing
October 2013

Evolutionary analysis of hepatitis C virus gene sequences from 1953.

Philos Trans R Soc Lond B Biol Sci 2013 Sep 12;368(1626):20130168. Epub 2013 Aug 12.

Department of Zoology, University of Oxford, , Oxford, UK.

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http://dx.doi.org/10.1098/rstb.2013.0168DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3758194PMC
September 2013

Virology: The virus whose family expanded.

Nature 2013 Jun;498(7454):310-1

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http://dx.doi.org/10.1038/498310bDOI Listing
June 2013

Integrative molecular phylogeography in the context of infectious diseases on the human-animal interface.

Parasitology 2012 Dec 29;139(14):1939-51. Epub 2012 Aug 29.

Department of Zoology, University of Oxford, Oxford, UK, OX13PS.

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http://www.journals.cambridge.org/abstract_S0031182012001102
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http://dx.doi.org/10.1017/S0031182012001102DOI Listing
December 2012

A new evolutionary model for hepatitis C virus chronic infection.

PLoS Pathog 2012 3;8(5):e1002656. Epub 2012 May 3.

Department of Zoology, University of Oxford, United Kingdom.

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https://dx.plos.org/10.1371/journal.ppat.1002656
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http://dx.doi.org/10.1371/journal.ppat.1002656DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3342959PMC
November 2012

Spatial accessibility and the spread of HIV-1 subtypes and recombinants.

AIDS 2012 Nov;26(18):2351-60

Department of Geography, University of Florida, Gainesville, USA.

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http://dx.doi.org/10.1097/QAD.0b013e328359a904DOI Listing
November 2012

PhyloTempo: A Set of R Scripts for Assessing and Visualizing Temporal Clustering in Genealogies Inferred from Serially Sampled Viral Sequences.

Evol Bioinform Online 2012 11;8:261-9. Epub 2012 Jun 11.

Department of Laboratory Medicine, Division of Clinical Microbiology, Karolinska University Hospital, Karolinska Institutet, Stockholm, Sweden.

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http://dx.doi.org/10.4137/EBO.S9738DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3382462PMC
August 2012

HIV-1 Subtype distribution in morocco based on national sentinel surveillance data 2004-2005.

AIDS Res Ther 2012 Feb 14;9(1). Epub 2012 Feb 14.

Department of Epidemiology and Emerging Pathogens Institute, University of Florida, Gainesville, USA.

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http://dx.doi.org/10.1186/1742-6405-9-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308925PMC
February 2012

High-resolution phylogenetics and phylogeography of human immunodeficiency virus type 1 subtype C epidemic in South America.

J Gen Virol 2011 Jul 30;92(Pt 7):1698-709. Epub 2011 Mar 30.

Pós-Graduação em Biologia Molecular, Instituto de Biologia, Universidade de Brasília, Brasília 70919-900, DF, Brazil.

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http://dx.doi.org/10.1099/vir.0.028951-0DOI Listing
July 2011

The mode and tempo of hepatitis C virus evolution within and among hosts.

BMC Evol Biol 2011 May 19;11:131. Epub 2011 May 19.

Department of Zoology, Oxford University, South Parks Road, UK.

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http://dx.doi.org/10.1186/1471-2148-11-131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3112090PMC
May 2011

Haplotype-based study of the association of alcohol-metabolizing genes with alcohol dependence in four independent populations.

Alcohol Clin Exp Res 2011 Feb 17;35(2):304-16. Epub 2010 Nov 17.

From the Laboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, NIH, Bethesda, Maryland 20892, USA.

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http://dx.doi.org/10.1111/j.1530-0277.2010.01346.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3026908PMC
February 2011

Distinct patterns of HIV-1 evolution within metastatic tissues in patients with non-Hodgkins lymphoma.

PLoS One 2009 Dec 3;4(12):e8153. Epub 2009 Dec 3.

Department of Pathology Immunology and Laboratory Medicine, University of Florida, Gainesville, Florida, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0008153PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2780293PMC
December 2009

Spatial phylodynamics of HIV-1 epidemic emergence in east Africa.

AIDS 2009 Sep;23(14):F9-F17

Department of Pathology, Immunology, and Laboratory Medicine, University of Florida, Gainesville, Florida 32610, USA.

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http://dx.doi.org/10.1097/QAD.0b013e32832faf61DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2742553PMC
September 2009

Ancient, independent evolution and distinct molecular features of the novel human T-lymphotropic virus type 4.

Retrovirology 2009 Feb 2;6. Epub 2009 Feb 2.

Laboratory Branch, Division of HIV/AIDS Prevention, National Center for HIV/AIDS, Viral Hepatitis, STD, and TB Prevention, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.

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http://dx.doi.org/10.1186/1742-4690-6-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647524PMC
February 2009

An exploratory algorithm to identify intra-host recombinant viral sequences.

Mol Phylogenet Evol 2008 Nov 31;49(2):618-28. Epub 2008 Aug 31.

Department of Pathology, Immunology, and Laboratory Medicine, University of Florida, College of Medicine, 1376 Mowry Road, P.O. Box 106633, Gainesville, FL 32610, USA.

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http://dx.doi.org/10.1016/j.ympev.2008.08.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2615825PMC
November 2008

Linkage disequilibrium and association analysis of alpha-synuclein and alcohol and drug dependence in two American Indian populations.

Alcohol Clin Exp Res 2007 Apr;31(4):546-54

Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, Maryland, USA.

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http://dx.doi.org/10.1111/j.1530-0277.2007.00338.xDOI Listing
April 2007