Randall J Radmer

Randall J Radmer

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Randall J Radmer

Randall J Radmer

Publications by authors named "Randall J Radmer"

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10Publications

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Molecular dynamics simulations of the full triple helical region of collagen type I provide an atomic scale view of the protein's regional heterogeneity.

Pac Symp Biocomput 2011 :193-204

Department of Genetics, Stanford University, 1501 S. California Avenue, Palo Alto, CA 94304, USA.

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November 2013

Knowledge-based instantiation of full atomic detail into coarse-grain RNA 3D structural models.

Bioinformatics 2009 Dec 7;25(24):3259-66. Epub 2009 Oct 7.

Department of Bioengineering, Stanford University, Stanford, CA 94305, USA.

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December 2009

Improving structure-based function prediction using molecular dynamics.

Structure 2009 Jul;17(7):919-29

Department of Genetics, Stanford University, Clark Center, Stanford, CA 94305, USA.

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July 2009

Combining molecular dynamics and machine learning to improve protein function recognition.

Pac Symp Biocomput 2008 :332-43

Department of Genetics, Stanford University, 318 Campus Drive Clark Center S240 Stanford, CA 94305, USA.

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March 2008

Triple helical structure and stabilization of collagen-like molecules with 4(R)-hydroxyproline in the Xaa position.

Biophys J 2006 Jan 28;90(2):578-88. Epub 2005 Oct 28.

Department of Genetics, School of Medicine, Stanford University, Stanford, California 94305, USA.

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January 2006

A new set of molecular mechanics parameters for hydroxyproline and its use in molecular dynamics simulations of collagen-like peptides.

J Comput Chem 2005 Nov;26(15):1612-6

Department of Chemistry and Structural Biology, Stanford University, Stanford, California 94305, USA.

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November 2005

Severity of osteogenesis imperfecta and structure of a collagen-like peptide modeling a lethal mutation site.

Biochemistry 2004 May;43(18):5314-23

Department of Genetics, School of Medicine, Stanford University, Stanford, California 94305, USA.

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May 2004