Ramneek Gupta

Ramneek Gupta

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Ramneek Gupta

Ramneek Gupta

Publications by authors named "Ramneek Gupta"

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Candidate single nucleotide polymorphisms and thromboembolism in acute lymphoblastic leukemia - A NOPHO ALL2008 study.

Thromb Res 2019 Dec 7;184:92-98. Epub 2019 Nov 7.

Department of Pediatrics and Adolescent Medicine, Rigshospitalet, University Hospital of Copenhagen, Belgdamsvej 9, 2100 Copenhagen, Denmark; Institute of Clinical Medicine, Faculty of Medicine, University of Copenhagen, Nørregade 10, 1165 Copenhagen, Denmark.

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http://dx.doi.org/10.1016/j.thromres.2019.11.002DOI Listing
December 2019

The oncoprotein TBX3 is controlling severity in experimental arthritis.

Arthritis Res Ther 2019 01 10;21(1):16. Epub 2019 Jan 10.

Section for Molecular and Cellular Pharmacology, Department of Drug Design and Pharmacology, University of Copenhagen, Copenhagen, Denmark.

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https://arthritis-research.biomedcentral.com/articles/10.118
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http://dx.doi.org/10.1186/s13075-018-1797-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6329118PMC
January 2019

Obesity is associated with depot-specific alterations in adipocyte DNA methylation and gene expression.

Adipocyte 2017 04 18;6(2):124-133. Epub 2017 Apr 18.

b Laboratory of Genomics and Molecular Biomedicine, Department of Biology , University of Copenhagen , Copenhagen , Denmark.

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http://dx.doi.org/10.1080/21623945.2017.1320002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5477735PMC
April 2017

Eukaryotic glycosylation: online methods for site prediction on protein sequences.

Methods Mol Biol 2015 ;1273:127-37

Copenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine and School of Dentistry, University of Copenhagen, Blegdamsvej 3, 2200, Copenhagen N, Denmark.

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http://dx.doi.org/10.1007/978-1-4939-2343-4_9DOI Listing
November 2015

Germ Cell Cancer and Multiple Relapses: Toxicity and Survival.

J Clin Oncol 2015 Oct 3;33(28):3116-23. Epub 2015 Aug 3.

Jakob Lauritsen, Maria G.G. Kier, Mette S. Mortensen, Mikkel Bandak, and Gedske Daugaard, Copenhagen University Hospital, Copenhagen; Maria G.G. Kier, Danish Cancer Society Research Center, Strandboulevarden, Copenhagen; Ramneek Gupta, Technical University of Denmark, Kongens Lyngby; Niels V. Holm, Odense University Hospital, Odense; and Mads Agerbaek, Aarhus University Hospital, Aarhus, Denmark.

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http://dx.doi.org/10.1200/JCO.2014.60.1310DOI Listing
October 2015

Host genome variations and risk of infections during induction treatment for childhood acute lymphoblastic leukaemia.

Eur J Haematol 2014 Apr 28;92(4):321-30. Epub 2014 Jan 28.

Department of Paediatrics, St. Olavs Hospital, Trondheim, Norway; Department of Laboratory Medicine, Children's and Women's Health, Faculty of Medicine, Norwegian University of Science and Technology, Trondheim, Norway.

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http://dx.doi.org/10.1111/ejh.12243DOI Listing
April 2014

Prediction of disease causing non-synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP.

PLoS One 2013 25;8(7):e68370. Epub 2013 Jul 25.

Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Kongens Lyngby, Denmark.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0068370PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3723835PMC
March 2014

TIMP1 overexpression mediates resistance of MCF-7 human breast cancer cells to fulvestrant and down-regulates progesterone receptor expression.

Tumour Biol 2013 Dec 24;34(6):3839-51. Epub 2013 Jul 24.

Faculty of Health and Medical Sciences, Department of Veterinary Disease Biology, University of Copenhagen, Dyrlægevej 88, 1, 1870, Frederiksberg C, Denmark.

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http://dx.doi.org/10.1007/s13277-013-0969-7DOI Listing
December 2013

TIMP-1 increases expression and phosphorylation of proteins associated with drug resistance in breast cancer cells.

J Proteome Res 2013 Sep 21;12(9):4136-51. Epub 2013 Aug 21.

Institute of Veterinary Disease Biology, Faculty of Health and Medical Sciences and Sino-Danish Breast Cancer Research Centre, University of Copenhagen, Dyrlægevej 88, 1., 1870 Frederiksberg C, Denmark.

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http://dx.doi.org/10.1021/pr400457uDOI Listing
September 2013

HExpoChem: a systems biology resource to explore human exposure to chemicals.

Bioinformatics 2013 May 11;29(9):1231-2. Epub 2013 Mar 11.

Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, 2800 Lyngby, Denmark.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btt112DOI Listing
May 2013

Genome-wide analysis of cytogenetic aberrations in ETV6/RUNX1-positive childhood acute lymphoblastic leukaemia.

Br J Haematol 2012 May 7;157(4):476-82. Epub 2012 Mar 7.

Clinic for Paediatric and Adolescent Medicine, The Juliane Marie Centre, The University Hospital Rigshospitalet, Copenhagen.

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http://dx.doi.org/10.1111/j.1365-2141.2012.09083.xDOI Listing
May 2012

Protein annotation in the era of personal genomics.

Curr Opin Struct Biol 2010 Jun 18;20(3):335-41. Epub 2010 Apr 18.

NNF Center for Protein Research, Faculty of Health Sciences, Blegdamsvej 3b, DK-2200 Copenhagen N, Denmark.

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http://dx.doi.org/10.1016/j.sbi.2010.03.008DOI Listing
June 2010

Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites.

Glycobiology 2005 Feb 22;15(2):153-64. Epub 2004 Sep 22.

Center for Biological Sequence Analysis, BioCentrum, Building 208, Technical University of Denmark, DK-2800 Lyngby, Denmark.

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https://academic.oup.com/glycob/article-lookup/doi/10.1093/g
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http://dx.doi.org/10.1093/glycob/cwh151DOI Listing
February 2005

Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence.

Proteomics 2004 Jun;4(6):1633-49

Center for Biological Sequence Analysis, The Technical University of Denmark, Lyngby, Denmark.

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http://doi.wiley.com/10.1002/pmic.200300771
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http://dx.doi.org/10.1002/pmic.200300771DOI Listing
June 2004

Analysis and prediction of leucine-rich nuclear export signals.

Protein Eng Des Sel 2004 Jun 16;17(6):527-36. Epub 2004 Aug 16.

Center for Biological Sequence Analysis, Biocentrum-DTU, Technical University of Denmark, Building 208, DK-2800 Lyngby, Denmark.

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https://academic.oup.com/peds/article-lookup/doi/10.1093/pro
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http://dx.doi.org/10.1093/protein/gzh062DOI Listing
June 2004

NESbase version 1.0: a database of nuclear export signals.

Nucleic Acids Res 2003 Jan;31(1):393-6

Center for Biological Sequence Analysis, Building-208, Technical University of Denmark, DK-2800 Lyngby, Denmark.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC165548PMC
http://dx.doi.org/10.1093/nar/gkg101DOI Listing
January 2003

Plasmodium falciparum merozoite surface protein 1.

Eur J Biochem 2003 Jan;270(2):366-75

Department of Pathology, Centre médical universitaire, Geneva, Switzerland.

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http://dx.doi.org/10.1046/j.1432-1033.2003.03397.xDOI Listing
January 2003

Prediction of glycosylation across the human proteome and the correlation to protein function.

Pac Symp Biocomput 2002 :310-22

Center for Biological Sequence Analysis, Bldg-208, Bio-Centrum Technical University of Denmark, DK-2800 Lyngby, Denmark.

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October 2002