Publications by authors named "Ralf Schneider"

63Publications

A Genomic Cluster Containing Novel and Conserved Genes is Associated with Cichlid Fish Dental Developmental Convergence.

Mol Biol Evol 2020 Nov;37(11):3165-3174

Department for Zoology and Evolutionary Biology, University of Konstanz, Konstanz, Germany.

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http://dx.doi.org/10.1093/molbev/msaa153DOI Listing
November 2020

Diving into divergence: Differentiation in swimming performances, physiology and gene expression between locally-adapted sympatric cichlid fishes.

Mol Ecol 2020 04 4;29(7):1219-1234. Epub 2019 Dec 4.

Lehrstuhl für Zoologie und Evolutionsbiologie, Department of Biology, University of Konstanz, Konstanz, Germany.

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http://dx.doi.org/10.1111/mec.15304DOI Listing
April 2020

Mineralized scale patterns on the cell periphery of the chrysophyte Mallomonas determined by comparative 3D Cryo-FIB SEM data processing.

J Struct Biol 2020 01 12;209(1):107403. Epub 2019 Oct 12.

Institute of Biomaterials and Biomolecular Systems, Biobased Materials Group, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany; AMICA - Stuttgart Research Focus (SRF), University of Stuttgart, Pfaffenwaldring 32, 70569 Stuttgart, Germany; Stuttgart Research Center Systems Biology (SRCSB), University of Stuttgart, Stuttgart 70569, Germany.

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http://dx.doi.org/10.1016/j.jsb.2019.10.005DOI Listing
January 2020

Conservation and novelty in the microRNA genomic landscape of hyperdiverse cichlid fishes.

Sci Rep 2019 09 25;9(1):13848. Epub 2019 Sep 25.

Chair in Zoology and Evolutionary Biology, Department of Biology, University of Konstanz, 78457, Konstanz, Germany.

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http://dx.doi.org/10.1038/s41598-019-50124-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6761260PMC
September 2019

MicroRNA gene regulation in extremely young and parallel adaptive radiations of crater lake cichlid fish.

Mol Biol Evol 2019 Aug 9. Epub 2019 Aug 9.

Lehrstuhl für Zoologie und Evolutionsbiologie, Department of Biology, University of Konstanz, Universitätsstraße 10, 78457 Konstanz, Germany.

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http://dx.doi.org/10.1093/molbev/msz168DOI Listing
August 2019

Intrathecal administration of nusinersen in adolescent and adult SMA type 2 and 3 patients.

J Neurol 2019 Jan 20;266(1):183-194. Epub 2018 Nov 20.

Department of Orthopedic Surgery, RKU-University and Rehabilitation Clinics, Ulm University, Ulm, Germany.

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http://dx.doi.org/10.1007/s00415-018-9124-0DOI Listing
January 2019

Long-Term Outcomes and Prognostic Factors After Pencil-Beam Scanning Proton Radiation Therapy for Spinal Chordomas: A Large, Single-Institution Cohort.

Int J Radiat Oncol Biol Phys 2018 05 2;101(1):226-233. Epub 2018 Feb 2.

Center for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland; University of Bern, Bern, Switzerland; University of Zürich, Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.ijrobp.2018.01.060DOI Listing
May 2018

The skeletal ontogeny of Astatotilapia burtoni - a direct-developing model system for the evolution and development of the teleost body plan.

BMC Dev Biol 2018 04 3;18(1). Epub 2018 Apr 3.

Chair in Zoology and Evolutionary Biology, Department of Biology, University of Konstanz, Universitätsstraße 10, 78457, Constance, Germany.

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http://dx.doi.org/10.1186/s12861-018-0166-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5883283PMC
April 2018

Molecular investigation of genetic assimilation during the rapid adaptive radiations of East African cichlid fishes.

Mol Ecol 2017 Dec 23;26(23):6634-6653. Epub 2017 Nov 23.

Lehrstuhl für Zoologie und Evolutionsbiologie, Department of Biology, University of Konstanz, Konstanz, Germany.

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http://dx.doi.org/10.1111/mec.14405DOI Listing
December 2017

Lateralized Feeding Behavior is Associated with Asymmetrical Neuroanatomy and Lateralized Gene Expressions in the Brain in Scale-Eating Cichlid Fish.

Genome Biol Evol 2017 11;9(11):3122-3136

Department of Biology, Lehrstuhl für Zoologie und Evolutionsbiologie, University of Konstanz, Konstanz, Germany.

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http://dx.doi.org/10.1093/gbe/evx218DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737854PMC
November 2017

Long-Term Clinical Safety of High-Dose Proton Radiation Therapy Delivered With Pencil Beam Scanning Technique for Extracranial Chordomas and Chondrosarcomas in Adult Patients: Clinical Evidence of Spinal Cord Tolerance.

Int J Radiat Oncol Biol Phys 2018 01 4;100(1):218-225. Epub 2017 Sep 4.

Center for Proton Therapy, Paul Scherrer Institute, ETH Domain, Villigen, Switzerland; Radiation Oncology Department, University Hospital of Bern, Bern, Switzerland; Radiation Oncology Department, University Hospital of Zürich, University of Zürich, Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.ijrobp.2017.08.037DOI Listing
January 2018

Long-Term Clinical Outcomes of Pencil Beam Scanning Proton Therapy for Benign and Non-benign Intracranial Meningiomas.

Int J Radiat Oncol Biol Phys 2017 12 12;99(5):1190-1198. Epub 2017 Aug 12.

Center for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland; University of Bern, Bern, Switzerland; University of Zürich, Zürich, Switzerland.

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https://linkinghub.elsevier.com/retrieve/pii/S03603016173371
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http://dx.doi.org/10.1016/j.ijrobp.2017.08.005DOI Listing
December 2017

Pencil beam scanned protons for the treatment of patients with Ewing sarcoma.

Pediatr Blood Cancer 2017 Dec 19;64(12). Epub 2017 Jun 19.

Center for Proton Therapy, Paul Scherrer Institute, ETH Domain, Switzerland.

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http://dx.doi.org/10.1002/pbc.26688DOI Listing
December 2017

Effect of Anatomic Changes on Pencil Beam Scanned Proton Dose Distributions for Cranial and Extracranial Tumors.

Int J Radiat Oncol Biol Phys 2017 03 16;97(3):616-623. Epub 2016 Nov 16.

Center for Proton Therapy, Paul Scherrer Institut, Villigen, Switzerland.

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http://dx.doi.org/10.1016/j.ijrobp.2016.11.013DOI Listing
March 2017

How plasticity, genetic assimilation and cryptic genetic variation may contribute to adaptive radiations.

Mol Ecol 2017 Jan 14;26(1):330-350. Epub 2016 Nov 14.

Lehrstuhl für Zoologie und Evolutionsbiologie, Department of Biology, University of Konstanz, Universitaetstrasse 10, 78457, Konstanz, Germany.

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http://dx.doi.org/10.1111/mec.13880DOI Listing
January 2017

Proton Irradiation with Hyperthermia in Unresectable Soft Tissue Sarcoma.

Int J Part Ther 2016 30;3(2):327-336. Epub 2016 Dec 30.

Centre for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland.

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http://dx.doi.org/10.14338/IJPT-16-00016.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6871610PMC
December 2016

A cascade screening approach for the identification of Bcr-Abl myristate pocket binders active against wild type and T315I mutant.

Bioorg Med Chem Lett 2016 08 18;26(15):3436-40. Epub 2016 Jun 18.

Dipartimento di Farmacia, Università degli Studi di Genova, Viale Benedetto XV, 3, 16132 Genova, Italy. Electronic address:

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http://dx.doi.org/10.1016/j.bmcl.2016.06.051DOI Listing
August 2016

Ellman's and Aldrithiol Assay as Versatile and Complementary Tools for the Quantification of Thiol Groups and Ligands on Nanomaterials.

Anal Chem 2016 09 22;88(17):8624-31. Epub 2016 Aug 22.

Federal Institute for Materials Research and Testing (BAM), Richard-Willstaetter-Str. 11, D-12489 Berlin, Germany.

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http://dx.doi.org/10.1021/acs.analchem.6b01798DOI Listing
September 2016

Tumour control and Quality of Life in children with rhabdomyosarcoma treated with pencil beam scanning proton therapy.

Radiother Oncol 2016 07 28;120(1):163-8. Epub 2016 May 28.

Department of Radiation Oncology, Inselspital, Bern University Hospital, and University of Bern, Switzerland; Center for Proton Therapy, Paul Scherrer Institute, Switzerland; University of Bern, Switzerland; University of Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.radonc.2016.05.013DOI Listing
July 2016

Tumour control and Quality of Life in children with rhabdomyosarcoma treated with pencil beam scanning proton therapy.

Radiother Oncol 2016 07 28;120(1):163-8. Epub 2016 May 28.

Department of Radiation Oncology, Inselspital, Bern University Hospital, and University of Bern, Switzerland; Center for Proton Therapy, Paul Scherrer Institute, Switzerland; University of Bern, Switzerland; University of Zürich, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.radonc.2016.05.013DOI Listing
July 2016

Optic toxicity in radiation treatment of meningioma: a retrospective study in 213 patients.

J Neurooncol 2016 May 6;127(3):597-606. Epub 2016 Feb 6.

Department of Radiation Oncology, Klinikum rechts der Isar, Technische Universität München, Ismaninger Strasse 22, 81675, Munich, Germany.

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http://dx.doi.org/10.1007/s11060-016-2071-7DOI Listing
May 2016

Pencil Beam Scanning Proton Therapy for Pediatric Parameningeal Rhabdomyosarcomas: Clinical Outcome of Patients Treated at the Paul Scherrer Institute.

Pediatr Blood Cancer 2016 10 23;63(10):1731-6. Epub 2015 Dec 23.

Center for Proton Therapy, Paul Scherrer Institute, Villigen PSI, Switzerland.

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http://dx.doi.org/10.1002/pbc.25864DOI Listing
October 2016

Does Full Wound Rupture following Median Pilonidal Closure Alter Long-Term Recurrence Rate?

Med Princ Pract 2015 4;24(6):571-7. Epub 2015 Sep 4.

Department of General, Visceral, Vascular and Pediatric Surgery, Saarland University, Homburg, Germany.

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http://dx.doi.org/10.1159/000437361DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5588279PMC
August 2016

Long-term outcomes and prognostic factors of skull-base chondrosarcoma patients treated with pencil-beam scanning proton therapy at the Paul Scherrer Institute.

Neuro Oncol 2016 Feb 30;18(2):236-43. Epub 2015 Aug 30.

Center for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland (D.C.W., S.B., R.M., F.A., A.B., A.J.L, R.S.); University of Bern, Bern, Switxerland (D.C.W.); University of Zürich, Zürich, Switzerland (D.C.W.); Department of Physics, ETH, Zürich, Switzerland (A.J.L.).

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http://dx.doi.org/10.1093/neuonc/nov154DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724177PMC
February 2016

Kinetics of aggregation and growth processes of PEG-stabilised mono- and multivalent gold nanoparticles in highly concentrated halide solutions.

Faraday Discuss 2015 14;181:85-102. Epub 2015 May 14.

Institut für Chemie u. Biochemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany.

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http://dx.doi.org/10.1039/c5fd00024fDOI Listing
October 2015

Could hyperthermia with proton therapy mimic carbon ion therapy? Exploring a thermo-radiobiological rationale.

Int J Hyperthermia 2014 Nov 14;30(7):524-30. Epub 2014 Oct 14.

Centre for Radiation Oncology, KSA-KSB, Kantonsspital Aarau , Aarau , Switzerland .

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http://dx.doi.org/10.3109/02656736.2014.963703DOI Listing
November 2014

A Rb1 promoter variant with reduced activity contributes to osteosarcoma susceptibility in irradiated mice.

Mol Cancer 2014 Aug 4;13:182. Epub 2014 Aug 4.

Institute of Radiation Biology, Helmholtz-Center Munich, National Research Centre for Health and Environment, Ingolstadter Landstrasse 1, D-85764 Neuherberg, Germany.

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http://dx.doi.org/10.1186/1476-4598-13-182DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237942PMC
August 2014

Regulatory gene networks that shape the development of adaptive phenotypic plasticity in a cichlid fish.

Mol Ecol 2014 09 30;23(18):4511-26. Epub 2014 Jul 30.

Lehrstuhl für Zoologie und Evolutionsbiologie, Department of Biology, University of Konstanz, Universitätstrasse 10, 78457, Konstanz, Germany; International Max Planck Research School for Organismal Biology, University of Konstanz, Universitätsstr 10, 78457, Konstanz, Germany.

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http://dx.doi.org/10.1111/mec.12851DOI Listing
September 2014

Targeting gain of function and resistance mutations in Abl and KIT by hybrid compound design.

J Med Chem 2013 Jul 10;56(14):5757-72. Epub 2013 Jul 10.

Department of Chemistry and Chemical Biology, Technical University of Dortmund, Otto-Hahn-Strasse 6, D-44227 Dortmund, Germany.

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http://dx.doi.org/10.1021/jm4004076DOI Listing
July 2013

Overcoming compound fluorescence in the FLiK screening assay with red-shifted fluorophores.

J Am Chem Soc 2013 Jun 24;135(22):8400-8. Epub 2013 May 24.

Chemical Genomics Centre of the Max-Planck-Society , Otto-Hahn-Strasse 15, 44137 Dortmund, Germany.

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http://dx.doi.org/10.1021/ja403074jDOI Listing
June 2013

Selective detection of allosteric phosphatase inhibitors.

J Am Chem Soc 2013 May 26;135(18):6838-41. Epub 2013 Apr 26.

Chemical Genomics Centre der Max-Planck-Gesellschaft, Dortmund, Germany.

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http://dx.doi.org/10.1021/ja4030484DOI Listing
May 2013

Dose to the developing dentition during therapeutic irradiation: organ at risk determination and clinical implications.

Int J Radiat Oncol Biol Phys 2013 May 16;86(1):108-13. Epub 2013 Jan 16.

Center for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland.

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http://dx.doi.org/10.1016/j.ijrobp.2012.11.041DOI Listing
May 2013

Direct binding assay for the detection of type IV allosteric inhibitors of Abl.

J Am Chem Soc 2012 Jun 25;134(22):9138-41. Epub 2012 May 25.

Chemical Genomics Centre of the Max-Planck-Society, Dortmund, Germany.

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http://pubs.acs.org/doi/10.1021/ja303858w
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http://dx.doi.org/10.1021/ja303858wDOI Listing
June 2012

Temporal lobe toxicity analysis after proton radiation therapy for skull base tumors.

Int J Radiat Oncol Biol Phys 2012 Aug 18;83(5):1432-40. Epub 2012 Feb 18.

Center for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland.

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http://dx.doi.org/10.1016/j.ijrobp.2011.10.042DOI Listing
August 2012

Spot scanning-based proton therapy for intracranial meningioma: long-term results from the Paul Scherrer Institute.

Int J Radiat Oncol Biol Phys 2012 Jul 2;83(3):865-71. Epub 2011 Dec 2.

Radiation Oncology, Geneva University Hospital, Geneva, Switzerland.

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http://dx.doi.org/10.1016/j.ijrobp.2011.08.027DOI Listing
July 2012

Phase-resolved optical emission of dusty rf discharges: Experiment and simulation.

Phys Rev E Stat Nonlin Soft Matter Phys 2011 Mar 29;83(3 Pt 2):036411. Epub 2011 Mar 29.

Institut für Physik, Ernst-Moritz-Arndt-Universiät, D-17489 Greifswald, Germany.

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http://dx.doi.org/10.1103/PhysRevE.83.036411DOI Listing
March 2011

Ab initio potential energy surface of CH and reaction dynamics of H + CH+.

Phys Chem Chem Phys 2011 Jun 19;13(21):10285-94. Epub 2011 Apr 19.

Max-Planck-Institut für Plasmaphysik, EURATOM Association, Wendelsteinstr. 1, 17491 Greifswald, Germany.

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http://dx.doi.org/10.1039/c1cp20212jDOI Listing
June 2011

Spot-scanning-based proton therapy for extracranial chordoma.

Int J Radiat Oncol Biol Phys 2011 Nov 15;81(4):e489-96. Epub 2011 Apr 15.

Center for Proton Therapy, Paul Scherrer Institute, Villigen, Switzerland.

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http://dx.doi.org/10.1016/j.ijrobp.2011.02.018DOI Listing
November 2011

Forskolin-induced differentiation of BeWo cells stimulates increased tumor growth in the chorioallantoic membrane (CAM) of the turkey (Meleagris gallopavo) egg.

Ann Anat 2011 May 10;193(3):220-3. Epub 2011 Mar 10.

Department of Anatomy II, University Hospital RWTH Aachen, Germany.

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http://dx.doi.org/10.1016/j.aanat.2011.02.007DOI Listing
May 2011

Biophysical characterisation of fibulin-5 proteins associated with disease.

J Mol Biol 2010 Aug 25;401(4):605-17. Epub 2010 Jun 25.

Laboratory of Genes and Development, Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK.

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http://dx.doi.org/10.1016/j.jmb.2010.06.039DOI Listing
August 2010

Fluorophore labeling of the glycine-rich loop as a method of identifying inhibitors that bind to active and inactive kinase conformations.

J Am Chem Soc 2010 Mar;132(12):4152-60

Chemical Genomics Centre of the Max Planck Society, Otto-Hahn-Strasse 15, D-44227 Dortmund, Germany.

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http://dx.doi.org/10.1021/ja908083eDOI Listing
March 2010

Modeling the ion transfer and polarization of ion exchange membranes in bioelectrochemical systems.

Bioelectrochemistry 2009 Jun 17;75(2):136-41. Epub 2009 Mar 17.

University of Greifswald, Institute of Biochemistry, Felix-Hausdorff-Strasse 4, Greifswald, Germany.

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http://dx.doi.org/10.1016/j.bioelechem.2009.03.001DOI Listing
June 2009

The RNA transport element RTE is essential for IAP LTR-retrotransposon mobility.

Virology 2008 Jul 15;377(1):88-99. Epub 2008 May 15.

Human Retrovirus Pathogenesis Section, Vaccine Branch, Center for Cancer Research, National Cancer Institute-Frederick, Frederick, MD 21702-1201, USA.

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http://dx.doi.org/10.1016/j.virol.2008.04.002DOI Listing
July 2008

Proton therapy in pediatric skull base and cervical canal low-grade bone malignancies.

Int J Radiat Oncol Biol Phys 2008 Jul 25;71(3):672-5. Epub 2008 Apr 25.

Centre de Protonthérapie de l'Institut Curie à Orsay, Campus Universitaire, Orsay, France.

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http://dx.doi.org/10.1016/j.ijrobp.2008.02.043DOI Listing
July 2008

20 years of experience in static intensity-modulated total-body irradiation and lung toxicity. Results in 257 consecutive patients.

Strahlenther Onkol 2007 Oct;183(10):545-51

Department of Radiotherapy (Radiation Oncology), University Hospital of Schleswig-Holstein, Campus Kiel (UHK), Kiel, Germany.

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http://dx.doi.org/10.1007/s00066-007-1656-7DOI Listing
October 2007

Long-term outcome after static intensity-modulated total body radiotherapy using compensators stratified by pediatric and adult cohorts.

Int J Radiat Oncol Biol Phys 2008 Jan 14;70(1):194-202. Epub 2007 Sep 14.

Rinecker Proton Therapy Center, München, Germany.

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http://dx.doi.org/10.1016/j.ijrobp.2007.05.035DOI Listing
January 2008

Potential energy surface and MULTIMODE vibrational analysis of C2H3+.

J Chem Phys 2006 Dec;125(22):224306

Max-Planck-Institut für Plasmaphysik, Teilinstitut Greifswald, EURATOM Association, D-17491 Greifswald, Germany.

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http://dx.doi.org/10.1063/1.2402169DOI Listing
December 2006

Chemical reaction studies in CH4/Ar and CH4/N2 gas mixtures of a dielectric barrier discharge.

J Phys Chem A 2005 Oct;109(41):9371-7

Institut für Physik, Ernst-Moritz-Arndt-Universität Greifswald, Domstrasse 10a, 17489 Greifswald, Germany.

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http://dx.doi.org/10.1021/jp053588aDOI Listing
October 2005

First single movement of turkey embryos.

Medicina (Kaunas) 2005 ;41(7):592-602

Department of Histology and Embryology, Kaunas University of Medicine, Kaunas, Lithuania.

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February 2006

LitMiner and WikiGene: identifying problem-related key players of gene regulation using publication abstracts.

Nucleic Acids Res 2005 Jul;33(Web Server issue):W779-82

GSF-National Research Center for Environment and Health, Institute of Experimental Genetics, AG BIODV, Ingolstädter Landstrasse 1, D-85768 Neuherberg, Germany.

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http://dx.doi.org/10.1093/nar/gki417DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1160178PMC
July 2005

Integrated functional and bioinformatics approach for the identification and experimental verification of RNA signals: application to HIV-1 INS.

Nucleic Acids Res 2003 Jun;31(11):2839-51

Institute of Molecular Virology and. Institute of Experimental Genetics, GSF-National Research Center for Environment and Health, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC156724PMC
http://dx.doi.org/10.1093/nar/gkg390DOI Listing
June 2003

Interstitial brachytherapy in the head and neck region: when has imaging for treatment planning to be performed?

Rontgenpraxis 2002 ;54(6):232-7

Interdisciplinary Center of Brachytherapy, University Hospital of the Christian-Albrechts-University, Kiel, Germany.

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November 2002