Rahulsimham Vegesna

Rahulsimham Vegesna

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Rahulsimham Vegesna

Rahulsimham Vegesna

Publications by authors named "Rahulsimham Vegesna"

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Dosage regulation, and variation in gene expression and copy number of human Y chromosome ampliconic genes.

PLoS Genet 2019 Sep 16;15(9):e1008369. Epub 2019 Sep 16.

Bioinformatics and Genomics Graduate Program, The Huck Institutes for the Life Sciences, Pennsylvania State University, University Park, PA, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1008369DOI Listing
September 2019

PRADA: pipeline for RNA sequencing data analysis.

Bioinformatics 2014 Aug 1;30(15):2224-6. Epub 2014 Apr 1.

Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, The Eli and Edythe L. Broad Institute of Harvard University and MIT, Cambridge, MA 02142 and Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY 10015, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu169DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103589PMC
August 2014

Inferring tumour purity and stromal and immune cell admixture from expression data.

Nat Commun 2013 ;4:2612

1] Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Centre, Houston, Texas 77030, USA [2] Department of Obstetrics and Gynecology, Niigata University Graduate School of Medical and Dental Sciences, Niigata 951-8510, Japan.

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http://dx.doi.org/10.1038/ncomms3612DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3826632PMC
May 2014

Halogen interactions in protein-ligand complexes: implications of halogen bonding for rational drug design.

J Chem Inf Model 2013 Nov 13;53(11):2781-91. Epub 2013 Nov 13.

Department of Chemistry and Biochemistry, Northern Arizona University , P.O. Box 5698, Flagstaff, Arizona 86011-5698, United States.

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http://dx.doi.org/10.1021/ci400257kDOI Listing
November 2013

The somatic genomic landscape of glioblastoma.

Cell 2013 Oct;155(2):462-77

Human Oncology and Pathogenesis Program, Brain Tumor Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA; Department of Neurosurgery, Memorial Sloan-Kettering Cancer Center, Department of Neurological Surgery, Weill Cornell Medical Center, New York, NY 10065, USA. Electronic address:

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https://www.genome.gov/Multimedia/Slides/TCGA2/27_Verhaak.pd
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http://linkinghub.elsevier.com/retrieve/pii/S009286741301208
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http://dx.doi.org/10.1016/j.cell.2013.09.034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910500PMC
October 2013