Publications by authors named "Radhika S Khetani"

16Publications

Integrated Skin Transcriptomics and Serum Multiplex Assays Reveal Novel Mechanisms of Wound Healing in Diabetic Foot Ulcers.

Authors:
Georgios Theocharidis Dimitrios Baltzis Matthieu Roustit Ana Tellechea Seema Dangwal Radhika S Khetani Bin Shu Wanni Zhao Jianfang Fu Swati Bhasin Antonios Kafanas Daniel Hui Shannan Ho Sui Nikolaos A Patsopoulos Manoj Bhasin Aristidis Veves

Diabetes 2020 10 6;69(10):2157-2169. Epub 2020 Aug 6.

Joslin-Beth Israel Deaconess Foot Center and The Rongxiang Xu, MD, Center for Regenerative Therapeutics, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA

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October 2020

β-Catenin and FGFR2 regulate postnatal rosette-based adrenocortical morphogenesis.

Authors:
Sining Leng Emanuele Pignatti Radhika S Khetani Manasvi S Shah Simiao Xu Ji Miao Makoto M Taketo Felix Beuschlein Paula Q Barrett Diana L Carlone David T Breault

Nat Commun 2020 04 3;11(1):1680. Epub 2020 Apr 3.

Division of Endocrinology, Boston Children's Hospital, Boston, MA, 02115, USA.

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April 2020

Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats.

Authors:
Yiran Dong Robert A Sanford William P Inskeep Vaibhav Srivastava Vincent Bulone Christopher J Fields Peter M Yau Mayandi Sivaguru Dag Ahrén Kyle W Fouke Joseph Weber Charles R Werth Isaac K Cann Kathleen M Keating Radhika S Khetani Alvaro G Hernandez Chris Wright Mark Band Brian S Imai Glenn A Fried Bruce W Fouke

Astrobiology 2019 12 30;19(12):1442-1458. Epub 2019 Apr 30.

Carl R. Woese Institute for Genomic Biology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.

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December 2019

Insulin Receptor Associates with Promoters Genome-wide and Regulates Gene Expression.

Authors:
Melissa L Hancock Rebecca C Meyer Meeta Mistry Radhika S Khetani Alexandre Wagschal Taehwan Shin Shannan J Ho Sui Anders M Näär John G Flanagan

Cell 2019 04 4;177(3):722-736.e22. Epub 2019 Apr 4.

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA; Program in Neuroscience, Harvard Medical School, Boston, MA 02115, USA. Electronic address:

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April 2019

Lung-Resident Mesenchymal Stromal Cells Reveal Transcriptional Dynamics of Lung Development in Preterm Infants.

Authors:
Ruggero Spadafora Junjie Lu Radhika S Khetani Cheng Zhang Aimee Iberg Hu Li Yang Shi Paul H Lerou

Am J Respir Crit Care Med 2018 10;198(7):961-964

2 Massachusetts General Hospital Boston, Massachusetts.

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October 2018

Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.

Authors:
C Victor Jongeneel Ovokeraye Achinike-Oduaran Ezekiel Adebiyi Marion Adebiyi Seun Adeyemi Bola Akanle Shaun Aron Efejiro Ashano Hocine Bendou Gerrit Botha Emile Chimusa Ananyo Choudhury Ravikiran Donthu Jenny Drnevich Oluwadamila Falola Christopher J Fields Scott Hazelhurst Liesl Hendry Itunuoluwa Isewon Radhika S Khetani Judit Kumuthini Magambo Phillip Kimuda Lerato Magosi Liudmila Sergeevna Mainzer Suresh Maslamoney Mamana Mbiyavanga Ayton Meintjes Danny Mugutso Phelelani Mpangase Richard Munthali Victoria Nembaware Andrew Ndhlovu Trust Odia Adaobi Okafor Olaleye Oladipo Sumir Panji Venesa Pillay Gloria Rendon Dhriti Sengupta Nicola Mulder

PLoS Comput Biol 2017 Jun 1;13(6):e1005419. Epub 2017 Jun 1.

Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, South Africa.

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June 2017

Glyphosate's impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching.

Authors:
Münevver Doğramacı Michael E Foley David P Horvath Alvaro G Hernandez Radhika S Khetani Christopher J Fields Kathleen M Keating Mark A Mikel James V Anderson

BMC Genomics 2015 May 19;16:395. Epub 2015 May 19.

United States Department of Agriculture, Agricultural Research Service, Sunflower and Plant Biology Research, Fargo, ND, 58102, USA.

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May 2015

MOV10 and FMRP regulate AGO2 association with microRNA recognition elements.

Authors:
Phillip J Kenny Hongjun Zhou Miri Kim Geena Skariah Radhika S Khetani Jenny Drnevich Mary Luz Arcila Kenneth S Kosik Stephanie Ceman

Cell Rep 2014 Dec 20;9(5):1729-1741. Epub 2014 Nov 20.

Cell and Developmental Biology, Roy J. Carver Biotechnology Center, University of Illinois-Urbana Champaign, Urbana, IL 61801, USA; College of Medicine, Roy J. Carver Biotechnology Center, University of Illinois-Urbana Champaign, Urbana, IL 61801, USA; Neuroscience Program, Roy J. Carver Biotechnology Center, University of Illinois-Urbana Champaign, Urbana, IL 61801, USA. Electronic address:

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December 2014

Finding the missing honey bee genes: lessons learned from a genome upgrade.

Authors:
Christine G Elsik Kim C Worley Anna K Bennett Martin Beye Francisco Camara Christopher P Childers Dirk C de Graaf Griet Debyser Jixin Deng Bart Devreese Eran Elhaik Jay D Evans Leonard J Foster Dan Graur Roderic Guigo Katharina Jasmin Hoff Michael E Holder Matthew E Hudson Greg J Hunt Huaiyang Jiang Vandita Joshi Radhika S Khetani Peter Kosarev Christie L Kovar Jian Ma Ryszard Maleszka Robin F A Moritz Monica C Munoz-Torres Terence D Murphy Donna M Muzny Irene F Newsham Justin T Reese Hugh M Robertson Gene E Robinson Olav Rueppell Victor Solovyev Mario Stanke Eckart Stolle Jennifer M Tsuruda Matthias Van Vaerenbergh Robert M Waterhouse Daniel B Weaver Charles W Whitfield Yuanqing Wu Evgeny M Zdobnov Lan Zhang Dianhui Zhu Richard A Gibbs

BMC Genomics 2014 Jan 30;15:86. Epub 2014 Jan 30.

Division of Animal Sciences, Division of Plant Sciences, and MU Informatics Institute, University of Missouri, Columbia, MO 65211, USA.

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January 2014

Intronic non-CG DNA hydroxymethylation and alternative mRNA splicing in honey bees.

Authors:
Pablo Cingolani Xiaoyi Cao Radhika S Khetani Chieh-Chun Chen Melissa Coon Alya'a Sammak Aliccia Bollig-Fischer Susan Land Yun Huang Matthew E Hudson Mark D Garfinkel Sheng Zhong Gene E Robinson Douglas M Ruden

BMC Genomics 2013 Sep 30;14:666. Epub 2013 Sep 30.

Department of Obstetrics and Gynecology, Wayne State University, Detroit, MI 48201, USA.

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September 2013

BeeSpace Navigator: exploratory analysis of gene function using semantic indexing of biological literature.

Authors:
Moushumi Sen Sarma David Arcoleo Radhika S Khetani Brant Chee Xu Ling Xin He Jing Jiang Qiaozhu Mei ChengXiang Zhai Bruce Schatz

Nucleic Acids Res 2011 Jul 9;39(Web Server issue):W462-9. Epub 2011 May 9.

Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

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July 2011

Corona is required for higher-order assembly of transverse filaments into full-length synaptonemal complex in Drosophila oocytes.

Authors:
Scott L Page Radhika S Khetani Cathleen M Lake Rachel J Nielsen Jennifer K Jeffress William D Warren Sharon E Bickel R Scott Hawley

PLoS Genet 2008 Sep 19;4(9):e1000194. Epub 2008 Sep 19.

Comparative Genomics Centre, School of Pharmacy and Molecular Sciences, James Cook University, Townsville, Australia.

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September 2008

Regulation of meiotic cohesion and chromosome core morphogenesis during pachytene in Drosophila oocytes.

Authors:
Radhika S Khetani Sharon E Bickel

J Cell Sci 2007 Sep 14;120(Pt 17):3123-37. Epub 2007 Aug 14.

Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA.

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September 2007

A novel ensemble learning method for de novo computational identification of DNA binding sites.

Authors:
Arijit Chakravarty Jonathan M Carlson Radhika S Khetani Robert H Gross

BMC Bioinformatics 2007 Jul 12;8:249. Epub 2007 Jul 12.

Department of Cancer Pharmacology, Millennium Pharmaceuticals Inc., Cambridge, MA, USA.

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July 2007

SPACER: identification of cis-regulatory elements with non-contiguous critical residues.

Authors:
Arijit Chakravarty Jonathan M Carlson Radhika S Khetani Charles E DeZiel Robert H Gross

Bioinformatics 2007 Apr;23(8):1029-31

Department of Cancer Pharmacology, Millennium Pharmaceuticals Inc., Cambridge, MA, USA.

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April 2007

Bounded search for de novo identification of degenerate cis-regulatory elements.

Authors:
Jonathan M Carlson Arijit Chakravarty Radhika S Khetani Robert H Gross

BMC Bioinformatics 2006 May 15;7:254. Epub 2006 May 15.

Department of Computer Science and Engineering, University of Washington, Seattle, WA 98105, USA.

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May 2006