Raad Z Gharaibeh

Raad Z Gharaibeh

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Raad Z Gharaibeh

Raad Z Gharaibeh

Publications by authors named "Raad Z Gharaibeh"

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28Publications

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Social Stress Affects Colonic Inflammation, the Gut Microbiome, and Short-chain Fatty Acid Levels and Receptors.

J Pediatr Gastroenterol Nutr 2019 Apr;68(4):533-540

Center for Microbial Pathogenesis, The Research Institute, Nationwide Children's Hospital.

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http://dx.doi.org/10.1097/MPG.0000000000002226DOI Listing
April 2019

Impact of vitamin D depletion during development on mouse sperm DNA methylation.

Epigenetics 2018 21;13(9):959-974. Epub 2018 Oct 21.

a Department of Genetics, School of Medicine , University of North Carolina at Chapel Hill , Chapel Hill , NC , USA.

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http://dx.doi.org/10.1080/15592294.2018.1526027DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6284778PMC
March 2019

Human colon mucosal biofilms from healthy or colon cancer hosts are carcinogenic.

J Clin Invest 2019 Mar 11;130. Epub 2019 Mar 11.

Bloomberg-Kimmel Institute for Immunotherapy, Departments of Oncology and Medicine and the Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins School of Medicine, Johns Hopkins Medical Institutions, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1172/JCI124196DOI Listing
March 2019

microRNA-146a-5p association with the cardiometabolic disease risk factor TMAO.

Physiol Genomics 2019 Feb 11;51(2):59-71. Epub 2019 Jan 11.

US Department of Agriculture, Agricultural Research Service Western Human Nutrition Research Center, Obesity and Metabolism Unit, Davis, California.

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http://dx.doi.org/10.1152/physiolgenomics.00079.2018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6397334PMC
February 2019

Microbiota and cancer immunotherapy: in search of microbial signals.

Gut 2018 Dec 8. Epub 2018 Dec 8.

Department of Medicine, University of Florida, Gainesville, Florida, USA.

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http://dx.doi.org/10.1136/gutjnl-2018-317220DOI Listing
December 2018

Microbiota-Derived Metabolic Factors Reduce Campylobacteriosis in Mice.

Gastroenterology 2018 05 1;154(6):1751-1763.e2. Epub 2018 Feb 1.

Department of Medicine, University of Florida, Gainesville, Florida; Department of Infectious Diseases and Pathology, University of Florida, Gainesville, Florida; Department of Anatomy and Cell Biology, University of Florida, Gainesville, Florida. Electronic address:

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http://dx.doi.org/10.1053/j.gastro.2018.01.042DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5927838PMC
May 2018

Interactions Between Stress and Sex in Microbial Responses Within the Microbiota-Gut-Brain Axis in a Mouse Model.

Psychosom Med 2018 May;80(4):361-369

From the Department of Bioinformatics and Genomics (Tsilimigras, Gharaibeh, Sioda, Fodor), University of North Carolina at Charlotte; Department of Veterinary Microbiology and Preventive Medicine (Gray, Lyte), College of Veterinary Medicine, Iowa State University, Ames; and Department of Medicine (Gharaibeh), Division of Gastroenterology, University of Florida, Gainesville.

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http://dx.doi.org/10.1097/PSY.0000000000000572DOI Listing
May 2018

Recent urbanization in China is correlated with a Westernized microbiome encoding increased virulence and antibiotic resistance genes.

Microbiome 2017 09 15;5(1):121. Epub 2017 Sep 15.

Department of Nutrition, Gillings School of Global Public Health, University of North Carolina, Chapel Hill, NC, 27516, USA.

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http://dx.doi.org/10.1186/s40168-017-0338-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5603068PMC
September 2017

An Atlas of β-Glucuronidases in the Human Intestinal Microbiome.

Structure 2017 07 1;25(7):967-977.e5. Epub 2017 Jun 1.

Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Departments of Biochemistry, Microbiology, and Genomics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. Electronic address:

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http://dx.doi.org/10.1016/j.str.2017.05.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5533298PMC
July 2017

Analysis of changes in diversity and abundance of the microbial community in a cystic fibrosis patient over a multiyear period.

J Clin Microbiol 2015 Jan 12;53(1):237-47. Epub 2014 Nov 12.

Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, North Carolina, USA

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http://dx.doi.org/10.1128/JCM.02555-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4290929PMC
January 2015

Microbial genomic analysis reveals the essential role of inflammation in bacteria-induced colorectal cancer.

Nat Commun 2014 Sep 3;5:4724. Epub 2014 Sep 3.

1] Department of Medicine, University of Florida, Gainesville, Florida 32611, USA [2] Department of Infectious Diseases and Pathology, University of Florida, Gainesville, Florida 32611, USA.

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http://www.nature.com/articles/ncomms5724
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http://dx.doi.org/10.1038/ncomms5724DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4155410PMC
September 2014

Reply to KN Litwak and S Levin.

Am J Clin Nutr 2014 Jan;99(1):210

Department of Pathology Section on Comparative Medicine and Lipid Sciences Wake Forest University Health Sciences Medical Center Boulevard Winston-Salem, NC 27127 E-mail:

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http://dx.doi.org/10.3945/ajcn.113.074633DOI Listing
January 2014

Rapid emergence of a ceftazidime-resistant Burkholderia multivorans strain in a cystic fibrosis patient.

J Cyst Fibros 2013 Dec 9;12(6):812-6. Epub 2013 Mar 9.

Department of Biology, University of North Carolina at Charlotte, Charlotte, NC 28223, United States.

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http://dx.doi.org/10.1016/j.jcf.2013.01.009DOI Listing
December 2013

Reply to JS White.

Am J Clin Nutr 2013 Nov;98(5):1370

Department of Pathology Section on Comparative Medicine and Lipid Sciences Wake Forest University Health Sciences Medical Center Boulevard Winston Salem, NC 27127 E-mail:

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https://academic.oup.com/ajcn/article/98/5/1370/4577402
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http://dx.doi.org/10.3945/ajcn.113.072264DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3798085PMC
November 2013

Dietary fructose induces endotoxemia and hepatic injury in calorically controlled primates.

Am J Clin Nutr 2013 Aug;98(2):349-57

Department of Pathology Section on Comparative Medicine and Lipid Sciences, Wake Forest University Health Sciences, Medical Center Boulevard, Winston-Salem, NC 27127, USA.

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http://dx.doi.org/10.3945/ajcn.112.057331DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3712547PMC
August 2013

The illusion of specific capture: surface and solution studies of suboptimal oligonucleotide hybridization.

BMC Res Notes 2013 Feb 27;6:72. Epub 2013 Feb 27.

Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Charlotte, NC, USA.

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http://dx.doi.org/10.1186/1756-0500-6-72DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3599332PMC
February 2013

Accurate estimates of microarray target concentration from a simple sequence-independent Langmuir model.

PLoS One 2010 Dec 30;5(12):e14464. Epub 2010 Dec 30.

Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Charlotte, North Carolina, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0014464PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3012684PMC
December 2010

Application of equilibrium models of solution hybridization to microarray design and analysis.

PLoS One 2010 Jun 10;5(6):e11048. Epub 2010 Jun 10.

Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Charlotte, North Carolina, USA.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0011048PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2883574PMC
June 2010

Background correction using dinucleotide affinities improves the performance of GCRMA.

BMC Bioinformatics 2008 Oct 23;9:452. Epub 2008 Oct 23.

Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.

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http://dx.doi.org/10.1186/1471-2105-9-452DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2579310PMC
October 2008

Software note: using probe secondary structure information to enhance Affymetrix GeneChip background estimates.

Comput Biol Chem 2007 Apr 20;31(2):92-8. Epub 2007 Feb 20.

Bioinformatics Research Center, University of North Carolina at Charlotte, 9201 University City Blvd., Charlotte, NC 28223, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S147692710700029
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http://dx.doi.org/10.1016/j.compbiolchem.2007.02.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2043163PMC
April 2007