Qiandong Zeng

Qiandong Zeng

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Qiandong Zeng

Qiandong Zeng

Publications by authors named "Qiandong Zeng"

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Genome Sequence for Candida albicans Clinical Oral Isolate 529L.

Microbiol Resour Announc 2019 Jun 20;8(25). Epub 2019 Jun 20.

Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1128/MRA.00554-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6588375PMC
June 2019

Genome Sequence of Spizellomyces punctatus.

Genome Announc 2016 Aug 18;4(4). Epub 2016 Aug 18.

Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1128/genomeA.00849-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4991717PMC
August 2016

Genomic insights into the Ixodes scapularis tick vector of Lyme disease.

Authors:
Monika Gulia-Nuss Andrew B Nuss Jason M Meyer Daniel E Sonenshine R Michael Roe Robert M Waterhouse David B Sattelle José de la Fuente Jose M Ribeiro Karine Megy Jyothi Thimmapuram Jason R Miller Brian P Walenz Sergey Koren Jessica B Hostetler Mathangi Thiagarajan Vinita S Joardar Linda I Hannick Shelby Bidwell Martin P Hammond Sarah Young Qiandong Zeng Jenica L Abrudan Francisca C Almeida Nieves Ayllón Ketaki Bhide Brooke W Bissinger Elena Bonzon-Kulichenko Steven D Buckingham Daniel R Caffrey Melissa J Caimano Vincent Croset Timothy Driscoll Don Gilbert Joseph J Gillespie Gloria I Giraldo-Calderón Jeffrey M Grabowski David Jiang Sayed M S Khalil Donghun Kim Katherine M Kocan Juraj Koči Richard J Kuhn Timothy J Kurtti Kristin Lees Emma G Lang Ryan C Kennedy Hyeogsun Kwon Rushika Perera Yumin Qi Justin D Radolf Joyce M Sakamoto Alejandro Sánchez-Gracia Maiara S Severo Neal Silverman Ladislav Šimo Marta Tojo Cristian Tornador Janice P Van Zee Jesús Vázquez Filipe G Vieira Margarita Villar Adam R Wespiser Yunlong Yang Jiwei Zhu Peter Arensburger Patricia V Pietrantonio Stephen C Barker Renfu Shao Evgeny M Zdobnov Frank Hauser Cornelis J P Grimmelikhuijzen Yoonseong Park Julio Rozas Richard Benton Joao H F Pedra David R Nelson Maria F Unger Jose M C Tubio Zhijian Tu Hugh M Robertson Martin Shumway Granger Sutton Jennifer R Wortman Daniel Lawson Stephen K Wikel Vishvanath M Nene Claire M Fraser Frank H Collins Bruce Birren Karen E Nelson Elisabet Caler Catherine A Hill

Nat Commun 2016 Feb 9;7:10507. Epub 2016 Feb 9.

Department of Entomology, Purdue University, West Lafayette, Indiana 47907, USA.

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http://dx.doi.org/10.1038/ncomms10507DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4748124PMC
February 2016

Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi.

G3 (Bethesda) 2015 Sep 28;5(12):2539-45. Epub 2015 Sep 28.

Center for Integrated Fungal Research, North Carolina State University, Raleigh, North Carolina 27606 Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina 27606

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http://dx.doi.org/10.1534/g3.115.020057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4683626PMC
September 2015

Genome update of the dimorphic human pathogenic fungi causing paracoccidioidomycosis.

PLoS Negl Trop Dis 2014 Dec 4;8(12):e3348. Epub 2014 Dec 4.

Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.

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http://dx.doi.org/10.1371/journal.pntd.0003348DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256289PMC
December 2014

Genome Sequence of Fusarium oxysporum f. sp. melonis Strain NRRL 26406, a Fungus Causing Wilt Disease on Melon.

Genome Announc 2014 Jul 31;2(4). Epub 2014 Jul 31.

United States Department of Agriculture, ARS Cereal Disease Laboratory, University of Minnesota, St. Paul, Minnesota, USA.

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http://dx.doi.org/10.1128/genomeA.00730-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4118060PMC
July 2014

High-Quality Draft Genome Sequence of Vagococcus lutrae Strain LBD1, Isolated from the Largemouth Bass Micropterus salmoides.

Genome Announc 2013 Dec 26;1(6). Epub 2013 Dec 26.

Departments of Ophthalmology, Microbiology, and Immunobiology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1128/genomeA.01087-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3873611PMC
December 2013

Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily.

Bioinformatics 2013 Oct 31;29(19):2387-94. Epub 2013 Jul 31.

Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, USA and Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt419DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3777111PMC
October 2013

Approaches to Fungal Genome Annotation.

Mycology 2011 Oct;2(3):118-141

Genome Sequencing and Analysis Program, Broad Institute, 7 Cambridge Center, Cambridge, MA 02142, U.S.A.

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http://dx.doi.org/10.1080/21501203.2011.606851DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3207268PMC
October 2011

Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.

PLoS Genet 2011 Aug 18;7(8):e1002230. Epub 2011 Aug 18.

Unité de Recherche Génomique - Info, UR1164, INRA, Versailles, France.

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http://dx.doi.org/10.1371/journal.pgen.1002230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158057PMC
August 2011

Elucidation of beta-oxidation pathways in Ralstonia eutropha H16 by examination of global gene expression.

J Bacteriol 2010 Oct 13;192(20):5454-64. Epub 2010 Aug 13.

Department of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA.

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http://jb.asm.org/cgi/doi/10.1128/JB.00493-10
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http://dx.doi.org/10.1128/JB.00493-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2950501PMC
October 2010

Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop.

Viruses 2010 Oct 13;2(10):2258-68. Epub 2010 Oct 13.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20892, USA; E-Mails: (Y.B.); (W.K.); (T.T.).

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http://dx.doi.org/10.3390/v2102258DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3185566PMC
October 2010

High-quality draft genome sequences of 28 Enterococcus sp. isolates.

J Bacteriol 2010 May 5;192(9):2469-70. Epub 2010 Mar 5.

Department of Ophthalmology, Harvard Medical School, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1128/JB.00153-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2863476PMC
May 2010

A catalog of reference genomes from the human microbiome.

Science 2010 May;328(5981):994-9

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http://dx.doi.org/10.1126/science.1183605DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2940224PMC
May 2010

CandidaDB: a multi-genome database for Candida species and related Saccharomycotina.

Nucleic Acids Res 2008 Jan 26;36(Database issue):D557-61. Epub 2007 Nov 26.

Unité Biologie et Pathogénicité Fongiques, INRA USC2019, Institut Pasteur, Paris, France.

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http://dx.doi.org/10.1093/nar/gkm1010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238939PMC
January 2008

Genome sequence of Aedes aegypti, a major arbovirus vector.

Science 2007 Jun 17;316(5832):1718-23. Epub 2007 May 17.

Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA.

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http://dx.doi.org/10.1126/science.1138878DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2868357PMC
June 2007

Phylogenetic footprinting and genome scanning identify vertebrate BMP response elements and new target genes.

Dev Biol 2005 May;281(2):210-26

Department of Developmental and Cell Biology, Developmental Biology Center, University of California, Irvine, CA 92697, USA.

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http://dx.doi.org/10.1016/j.ydbio.2005.02.014DOI Listing
May 2005

Systematic discovery of new genes in the Saccharomyces cerevisiae genome.

Genome Res 2003 Feb;13(2):264-71

Genome Therapeutics Corporation, Waltham, Massachusetts 02453, USA.

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http://dx.doi.org/10.1101/gr.232903DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC420365PMC
February 2003