Publications by authors named "Puya Gharahkhani"

59Publications

Assessment of polygenic architecture and risk prediction based on common variants across fourteen cancers.

Nat Commun 2020 07 3;11(1):3353. Epub 2020 Jul 3.

Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, USA.

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http://dx.doi.org/10.1038/s41467-020-16483-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7335068PMC
July 2020

Polygenic Risk Scores Allow Risk Stratification for Keratinocyte Cancer in Organ-Transplant Recipients.

J Invest Dermatol 2020 Jun 29. Epub 2020 Jun 29.

Statistical Genetics Lab, QIMR Berghofer Medical Research Institute, Herston, Queensland, Australia; School of Biomedical Sciences, Faculty of Health, and Institute of Health and Biomedical Innovation, Queensland University of Technology, Kelvin Grove, Queensland, Australia.

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http://dx.doi.org/10.1016/j.jid.2020.06.017DOI Listing
June 2020

Genome-wide meta-analysis identifies novel loci associated with age-related macular degeneration.

J Hum Genet 2020 Aug 10;65(8):657-665. Epub 2020 Apr 10.

Statistical Genetics, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.

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http://dx.doi.org/10.1038/s10038-020-0750-xDOI Listing
August 2020

Using Mendelian randomization to evaluate the causal relationship between serum C-reactive protein levels and age-related macular degeneration.

Eur J Epidemiol 2020 Feb 3;35(2):139-146. Epub 2020 Jan 3.

Statistical Genetics, QIMR Berghofer Medical Research Institute, 300 Herston Road, Herston, Brisbane, QLD, 4006, Australia.

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http://dx.doi.org/10.1007/s10654-019-00598-zDOI Listing
February 2020

Association between coffee consumption and overall risk of being diagnosed with or dying from cancer among >300 000 UK Biobank participants in a large-scale Mendelian randomization study.

Int J Epidemiol 2019 10;48(5):1447-1456

Statistical Genetics, Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.

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https://academic.oup.com/ije/advance-article/doi/10.1093/ije
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http://dx.doi.org/10.1093/ije/dyz144DOI Listing
October 2019

Combined analysis of keratinocyte cancers identifies novel genome-wide loci.

Hum Mol Genet 2019 09;28(18):3148-3160

Cancer Control Group, QIMR Berghofer Medical Research Institute, 300 Herston Road, Brisbane, QLD 4006, Australia.

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http://dx.doi.org/10.1093/hmg/ddz121DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6737293PMC
September 2019

Mendelian Randomization Study for Genetically Predicted Polyunsaturated Fatty Acids Levels on Overall Cancer Risk and Mortality.

Cancer Epidemiol Biomarkers Prev 2019 06 4;28(6):1015-1023. Epub 2019 Apr 4.

Statistical Genetics Laboratory, QIMR Berghofer Medical Research Institute, Herston, Australia.

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http://cebp.aacrjournals.org/lookup/doi/10.1158/1055-9965.EP
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http://dx.doi.org/10.1158/1055-9965.EPI-18-0940DOI Listing
June 2019

Effect of increased body mass index on risk of diagnosis or death from cancer.

Br J Cancer 2019 03 8;120(5):565-570. Epub 2019 Feb 8.

QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.

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http://dx.doi.org/10.1038/s41416-019-0386-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6462026PMC
March 2019

Author Correction: Cross-ancestry genome-wide association analysis of corneal thickness strengthens link between complex and Mendelian eye diseases.

Nat Commun 2019 01 8;10(1):155. Epub 2019 Jan 8.

Statistical Genetics, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4029, Australia.

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http://www.nature.com/articles/s41467-018-07819-1
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http://dx.doi.org/10.1038/s41467-018-07819-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6325104PMC
January 2019

Vitamin D and overall cancer risk and cancer mortality: a Mendelian randomization study.

Hum Mol Genet 2018 12;27(24):4315-4322

QIMR Berghofer Medical Research Institute, Brisbane, Australia.

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http://dx.doi.org/10.1093/hmg/ddy307DOI Listing
December 2018

Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error.

Authors:
Milly S Tedja Robert Wojciechowski Pirro G Hysi Nicholas Eriksson Nicholas A Furlotte Virginie J M Verhoeven Adriana I Iglesias Magda A Meester-Smoor Stuart W Tompson Qiao Fan Anthony P Khawaja Ching-Yu Cheng René Höhn Kenji Yamashiro Adam Wenocur Clare Grazal Toomas Haller Andres Metspalu Juho Wedenoja Jost B Jonas Ya Xing Wang Jing Xie Paul Mitchell Paul J Foster Barbara E K Klein Ronald Klein Andrew D Paterson S Mohsen Hosseini Rupal L Shah Cathy Williams Yik Ying Teo Yih Chung Tham Preeti Gupta Wanting Zhao Yuan Shi Woei-Yuh Saw E-Shyong Tai Xue Ling Sim Jennifer E Huffman Ozren Polašek Caroline Hayward Goran Bencic Igor Rudan James F Wilson Peter K Joshi Akitaka Tsujikawa Fumihiko Matsuda Kristina N Whisenhunt Tanja Zeller Peter J van der Spek Roxanna Haak Hanne Meijers-Heijboer Elisabeth M van Leeuwen Sudha K Iyengar Jonathan H Lass Albert Hofman Fernando Rivadeneira André G Uitterlinden Johannes R Vingerling Terho Lehtimäki Olli T Raitakari Ginevra Biino Maria Pina Concas Tae-Hwi Schwantes-An Robert P Igo Gabriel Cuellar-Partida Nicholas G Martin Jamie E Craig Puya Gharahkhani Katie M Williams Abhishek Nag Jugnoo S Rahi Phillippa M Cumberland Cécile Delcourt Céline Bellenguez Janina S Ried Arthur A Bergen Thomas Meitinger Christian Gieger Tien Yin Wong Alex W Hewitt David A Mackey Claire L Simpson Norbert Pfeiffer Olavi Pärssinen Paul N Baird Veronique Vitart Najaf Amin Cornelia M van Duijn Joan E Bailey-Wilson Terri L Young Seang-Mei Saw Dwight Stambolian Stuart MacGregor Jeremy A Guggenheim Joyce Y Tung Christopher J Hammond Caroline C W Klaver

Nat Genet 2018 06 28;50(6):834-848. Epub 2018 May 28.

Department of Ophthalmology, Erasmus Medical Center, Rotterdam, The Netherlands.

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http://www.nature.com/articles/s41588-018-0127-7
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http://dx.doi.org/10.1038/s41588-018-0127-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5980758PMC
June 2018

Polyunsaturated fatty acids and risk of melanoma: A Mendelian randomisation analysis.

Int J Cancer 2018 08 5;143(3):508-514. Epub 2018 Mar 5.

Statistical Genetics Lab, QIMR Berghofer Medical Research Institute, 300, Herston road, Brisbane, QLD, 4006, Australia.

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http://dx.doi.org/10.1002/ijc.31334DOI Listing
August 2018

New insights into the genetics of primary open-angle glaucoma based on meta-analyses of intraocular pressure and optic disc characteristics.

Hum Mol Genet 2017 01;26(2):438-453

Statistical Genetics, QIMR Berghofer Medical Research Institute, Royal Brisbane Hospital, Brisbane, Australia.

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http://dx.doi.org/10.1093/hmg/ddw399DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5968632PMC
January 2017

Association of vitamin D levels and risk of ovarian cancer: a Mendelian randomization study.

Authors:
Jue-Sheng Ong Gabriel Cuellar-Partida Yi Lu Peter A Fasching Alexander Hein Stefanie Burghaus Matthias W Beckmann Diether Lambrechts Els Van Nieuwenhuysen Ignace Vergote Adriaan Vanderstichele Jennifer Anne Doherty Mary Anne Rossing Jenny Chang-Claude Ursula Eilber Anja Rudolph Shan Wang-Gohrke Marc T Goodman Natalia Bogdanova Thilo Dörk Matthias Dürst Peter Hillemanns Ingo B Runnebaum Natalia Antonenkova Ralf Butzow Arto Leminen Heli Nevanlinna Liisa M Pelttari Robert P Edwards Joseph L Kelley Francesmary Modugno Kirsten B Moysich Roberta B Ness Rikki Cannioto Estrid Høgdall Claus K Høgdall Allan Jensen Graham G Giles Fiona Bruinsma Susanne K Kjaer Michelle At Hildebrandt Dong Liang Karen H Lu Xifeng Wu Maria Bisogna Fanny Dao Douglas A Levine Daniel W Cramer Kathryn L Terry Shelley S Tworoger Meir Stampfer Stacey Missmer Line Bjorge Helga B Salvesen Reidun K Kopperud Katharina Bischof Katja Kh Aben Lambertus A Kiemeney Leon Fag Massuger Angela Brooks-Wilson Sara H Olson Valerie McGuire Joseph H Rothstein Weiva Sieh Alice S Whittemore Linda S Cook Nhu D Le C Blake Gilks Jacek Gronwald Anna Jakubowska Jan Lubiński Tomasz Kluz Honglin Song Jonathan P Tyrer Nicolas Wentzensen Louise Brinton Britton Trabert Jolanta Lissowska John R McLaughlin Steven A Narod Catherine Phelan Hoda Anton-Culver Argyrios Ziogas Diana Eccles Ian Campbell Simon A Gayther Aleksandra Gentry-Maharaj Usha Menon Susan J Ramus Anna H Wu Agnieszka Dansonka-Mieszkowska Jolanta Kupryjanczyk Agnieszka Timorek Lukasz Szafron Julie M Cunningham Brooke L Fridley Stacey J Winham Elisa V Bandera Elizabeth M Poole Terry K Morgan Harvey A Risch Ellen L Goode Joellen M Schildkraut Celeste L Pearce Andrew Berchuck Paul Dp Pharoah Georgia Chenevix-Trench Puya Gharahkhani Rachel E Neale Penelope M Webb Stuart MacGregor

Int J Epidemiol 2016 10 4;45(5):1619-1630. Epub 2016 Sep 4.

Statistical Genetics laboratory, QIMR Berghofer Medical Research Institute, Herston, QLD 4006, Australia,

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http://dx.doi.org/10.1093/ije/dyw207DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100621PMC
October 2016

Genome-wide association studies in oesophageal adenocarcinoma and Barrett's oesophagus: a large-scale meta-analysis.

Lancet Oncol 2016 Oct 12;17(10):1363-1373. Epub 2016 Aug 12.

Institute of Human Genetics, and Department of Genomics, Life & Brain Center, University of Bonn, Bonn, Germany.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5052458PMC
http://dx.doi.org/10.1016/S1470-2045(16)30240-6DOI Listing
October 2016

Sweet Taste Perception is Associated with Body Mass Index at the Phenotypic and Genotypic Level.

Twin Res Hum Genet 2016 10 5;19(5):465-71. Epub 2016 Aug 5.

QIMR Berghofer Medical Research Institute,Brisbane,Queensland,Australia.

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http://dx.doi.org/10.1017/thg.2016.60DOI Listing
October 2016

Meta-analysis of gene-environment-wide association scans accounting for education level identifies additional loci for refractive error.

Authors:
Qiao Fan Virginie J M Verhoeven Robert Wojciechowski Veluchamy A Barathi Pirro G Hysi Jeremy A Guggenheim René Höhn Veronique Vitart Anthony P Khawaja Kenji Yamashiro S Mohsen Hosseini Terho Lehtimäki Yi Lu Toomas Haller Jing Xie Cécile Delcourt Mario Pirastu Juho Wedenoja Puya Gharahkhani Cristina Venturini Masahiro Miyake Alex W Hewitt Xiaobo Guo Johanna Mazur Jenifer E Huffman Katie M Williams Ozren Polasek Harry Campbell Igor Rudan Zoran Vatavuk James F Wilson Peter K Joshi George McMahon Beate St Pourcain David M Evans Claire L Simpson Tae-Hwi Schwantes-An Robert P Igo Alireza Mirshahi Audrey Cougnard-Gregoire Céline Bellenguez Maria Blettner Olli Raitakari Mika Kähönen Ilkka Seppala Tanja Zeller Thomas Meitinger Janina S Ried Christian Gieger Laura Portas Elisabeth M van Leeuwen Najaf Amin André G Uitterlinden Fernando Rivadeneira Albert Hofman Johannes R Vingerling Ya Xing Wang Xu Wang Eileen Tai-Hui Boh M Kamran Ikram Charumathi Sabanayagam Preeti Gupta Vincent Tan Lei Zhou Candice E H Ho Wan'e Lim Roger W Beuerman Rosalynn Siantar E-Shyong Tai Eranga Vithana Evelin Mihailov Chiea-Chuen Khor Caroline Hayward Robert N Luben Paul J Foster Barbara E K Klein Ronald Klein Hoi-Suen Wong Paul Mitchell Andres Metspalu Tin Aung Terri L Young Mingguang He Olavi Pärssinen Cornelia M van Duijn Jie Jin Wang Cathy Williams Jost B Jonas Yik-Ying Teo David A Mackey Konrad Oexle Nagahisa Yoshimura Andrew D Paterson Norbert Pfeiffer Tien-Yin Wong Paul N Baird Dwight Stambolian Joan E Bailey Wilson Ching-Yu Cheng Christopher J Hammond Caroline C W Klaver Seang-Mei Saw Jugnoo S Rahi Jean-François Korobelnik John P Kemp Nicholas J Timpson George Davey Smith Jamie E Craig Kathryn P Burdon Rhys D Fogarty Sudha K Iyengar Emily Chew Sarayut Janmahasatian Nicholas G Martin Stuart MacGregor Liang Xu Maria Schache Vinay Nangia Songhomitra Panda-Jonas Alan F Wright Jeremy R Fondran Jonathan H Lass Sheng Feng Jing Hua Zhao Kay-Tee Khaw Nick J Wareham Taina Rantanen Jaakko Kaprio Chi Pui Pang Li Jia Chen Pancy O Tam Vishal Jhanji Alvin L Young Angela Döring Leslie J Raffel Mary-Frances Cotch Xiaohui Li Shea Ping Yip Maurice K H Yap Ginevra Biino Simona Vaccargiu Maurizio Fossarello Brian Fleck Seyhan Yazar Jan Willem L Tideman Milly Tedja Margaret M Deangelis Margaux Morrison Lindsay Farrer Xiangtian Zhou Wei Chen Nobuhisa Mizuki Akira Meguro Kari Matti Mäkelä

Nat Commun 2016 Mar 29;7:11008. Epub 2016 Mar 29.

Department of Ophthalmology, Erasmus Medical Center, 3000 CA Rotterdam, The Netherlands.

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http://dx.doi.org/10.1038/ncomms11008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4820539PMC
March 2016

Genome-wide association analysis identifies TXNRD2, ATXN2 and FOXC1 as susceptibility loci for primary open-angle glaucoma.

Nat Genet 2016 Feb 11;48(2):189-94. Epub 2016 Jan 11.

Department of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, USA.

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http://search.proquest.com/openview/9583d4c1af74c01602d422b2
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http://www.nature.com/doifinder/10.1038/ng.3482
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http://dx.doi.org/10.1038/ng.3482DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4731307PMC
February 2016

Potential Modifying Loci Associated With Primary Lens Luxation, Pedal Hyperkeratosis, and Ocular Phenotypes in Miniature Bull Terriers.

Invest Ophthalmol Vis Sci 2015 Dec;56(13):8288-96

School of Veterinary Science, University of Queensland, Gatton, Queensland, Australia.

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http://dx.doi.org/10.1167/iovs.15-18074DOI Listing
December 2015

A common variant near TGFBR3 is associated with primary open angle glaucoma.

Authors:
Zheng Li R Rand Allingham Masakazu Nakano Liyun Jia Yuhong Chen Yoko Ikeda Baskaran Mani Li-Jia Chen Changwon Kee David F Garway-Heath Sarangapani Sripriya Nobuo Fuse Khaled K Abu-Amero Chukai Huang Prasanthi Namburi Kathryn Burdon Shamira A Perera Puya Gharahkhani Ying Lin Morio Ueno Mineo Ozaki Takanori Mizoguchi Subbiah Ramasamy Krishnadas Essam A Osman Mei Chin Lee Anita S Y Chan Liza-Sharmini A Tajudin Tan Do Aurelien Goncalves Pascal Reynier Hong Zhang Rupert Bourne David Goh David Broadway Rahat Husain Anil K Negi Daniel H Su Ching-Lin Ho Augusto Azuara Blanco Christopher K S Leung Tina T Wong Azhany Yakub Yutao Liu Monisha E Nongpiur Jong Chul Han Do Nhu Hon Balekudaru Shantha Bowen Zhao Jinghong Sang NiHong Zhang Ryuichi Sato Kengo Yoshii Songhomita Panda-Jonas Allison E Ashley Koch Leon W Herndon Sayoko E Moroi Pratap Challa Jia Nee Foo Jin-Xin Bei Yi-Xin Zeng Cameron P Simmons Tran Nguyen Bich Chau Philomenadin Ferdinamarie Sharmila Merwyn Chew Blanche Lim Pansy O S Tam Elaine Chua Xiao Yu Ng Victor H K Yong Yaan Fun Chong Wee Yang Meah Saravanan Vijayan Sohn Seongsoo Wang Xu Yik Ying Teo Jessica N Cooke Bailey Jae H Kang Jonathan L Haines Ching Yu Cheng Seang-Mei Saw E-Shyong Tai Julia E Richards Robert Ritch Douglas E Gaasterland Louis R Pasquale Jianjun Liu Jost B Jonas Dan Milea Ronnie George Saleh A Al-Obeidan Kazuhiko Mori Stuart Macgregor Alex W Hewitt Christopher A Girkin Mingzhi Zhang Periasamy Sundaresan Lingam Vijaya David A Mackey Tien Yin Wong Jamie E Craig Xinghuai Sun Shigeru Kinoshita Janey L Wiggs Chiea-Chuen Khor Zhenglin Yang Chi Pui Pang Ningli Wang Michael A Hauser Kei Tashiro Tin Aung Eranga N Vithana

Hum Mol Genet 2015 Jul 10;24(13):3880-92. Epub 2015 Apr 10.

Singapore Eye Research Institute, Department of Ophthalmology, Yong Loo Lin School of Medicine, Duke-NUS Graduate Medical School, Singapore, Singapore,

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http://dx.doi.org/10.1093/hmg/ddv128DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4459396PMC
July 2015

Meta-analysis of Genome-Wide Association Studies Identifies Novel Loci Associated With Optic Disc Morphology.

Genet Epidemiol 2015 Mar 28;39(3):207-16. Epub 2015 Jan 28.

Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands; Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands.

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http://eprints.soton.ac.uk/369296/1/ncomms5883.pdf
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http://doi.wiley.com/10.1002/gepi.21886
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http://dx.doi.org/10.1002/gepi.21886DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4480365PMC
March 2015

Meta-analysis of genome-wide association studies identifies novel loci that influence cupping and the glaucomatous process.

Nat Commun 2014 Sep 22;5:4883. Epub 2014 Sep 22.

Department of Twin Research and Genetic Epidemiology, King's College London, London WC2R 2LS, UK.

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http://eprints.soton.ac.uk/369296/1/ncomms5883.pdf
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http://www.nature.com/doifinder/10.1038/ncomms5883
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http://dx.doi.org/10.1038/ncomms5883DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4199103PMC
September 2014

PTPN22 polymorphisms may indicate a role for this gene in atopic dermatitis in West Highland white terriers.

BMC Res Notes 2011 Dec 30;4:571. Epub 2011 Dec 30.

Centre for Companion Animal Health, School of Veterinary Science, The University of Queensland, St Lucia, Queensland, 4069, Australia.

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http://dx.doi.org/10.1186/1756-0500-4-571DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271996PMC
December 2011

Atopic dermatitis in West Highland white terriers is associated with a 1.3-Mb region on CFA 17.

Immunogenetics 2012 Mar 12;64(3):209-17. Epub 2011 Oct 12.

School of Veterinary Science, The University of Queensland, 4343, Gatton, QLD, Australia.

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http://dx.doi.org/10.1007/s00251-011-0577-xDOI Listing
March 2012