Publications by authors named "Pradeep K Divakar"

38Publications

Draft genome sequences of five species from plantations in China, , and .

IMA Fungus 2019 27;10:22. Epub 2019 Dec 27.

Department of Biochemistry, Genetics and Microbiology (BGM), Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0028 South Africa.

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http://dx.doi.org/10.1186/s43008-019-0023-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325655PMC
December 2019

Lichens of Parmelioid Clade as Promising Multitarget Neuroprotective Agents.

Chem Res Toxicol 2019 06 7;32(6):1165-1177. Epub 2019 Jun 7.

Department of Pharmacology, Pharmacognosy and Botanical, Faculty of Pharmacy , Universidad Complutense de Madrid, Plaza Ramon y Cajal s/n, Ciudad Universitaria , 28040 , Madrid , Spain.

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http://dx.doi.org/10.1021/acs.chemrestox.9b00010DOI Listing
June 2019

Environment and host identity structure communities of green algal symbionts in lichens.

New Phytol 2018 Jan 11;217(1):277-289. Epub 2017 Sep 11.

Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage 25, Frankfurt am Main, 60325, Germany.

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http://dx.doi.org/10.1111/nph.14770DOI Listing
January 2018

A temporal banding approach for consistent taxonomic ranking above the species level.

Sci Rep 2017 05 23;7(1):2297. Epub 2017 May 23.

Science & Education, Field Museum of Natural History, 1400 S Lake Shore Drive, Chicago, IL, 60605, USA.

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http://dx.doi.org/10.1038/s41598-017-02477-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5442095PMC
May 2017

Panmixia and dispersal from the Mediterranean Basin to Macaronesian Islands of a macrolichen species.

Sci Rep 2017 01 19;7:40879. Epub 2017 Jan 19.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, 28040 Madrid, Spain.

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http://dx.doi.org/10.1038/srep40879DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5244402PMC
January 2017

Fungal-algal association patterns in lichen symbiosis linked to macroclimate.

New Phytol 2017 Apr 5;214(1):317-329. Epub 2016 Dec 5.

Department of Biological Sciences, Institute of Ecology, Evolution and Diversity, Goethe Universität, Frankfurt am Main, Germany.

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http://dx.doi.org/10.1111/nph.14366DOI Listing
April 2017

Hidden diversity before our eyes: Delimiting and describing cryptic lichen-forming fungal species in camouflage lichens (Parmeliaceae, Ascomycota).

Fungal Biol 2016 11;120(11):1374-1391

Science & Education, The Field Museum, 1400 South Lake Shore Drive, Chicago, IL, 60605, USA.

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http://dx.doi.org/10.1016/j.funbio.2016.06.001DOI Listing
November 2016

A Festschrift for David L. Hawksworth.

Fungal Biol 2016 11 20;120(11):1269-1271. Epub 2016 Aug 20.

Science & Education, The Field Museum, 1400 S. Lake Shore Drive, Chicago, IL 60605, USA. Electronic address:

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http://dx.doi.org/10.1016/j.funbio.2016.08.003DOI Listing
November 2016

An Integrative Approach for Understanding Diversity in the Punctelia rudecta Species Complex (Parmeliaceae, Ascomycota).

PLoS One 2016 10;11(2):e0146537. Epub 2016 Feb 10.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Plaza de Ramón y Cajal s/n, Madrid, Spain.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0146537PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4749632PMC
July 2016

Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota).

PLoS One 2015 1;10(5):e0124625. Epub 2015 May 1.

Department of Biological Sciences, Institute of Ecology, Evolution and Diversity, Goethe Universität, Grüneburgplatz 1, 60323, Frankfurt am Main, Germany; Biodiversity and Climate Research Centre (BiK-F), Senckenberg Gesellschaft für Naturforschung, Senckenberganlage 25, 60325, Frankfurt am Main, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0124625PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416777PMC
January 2016

Characterization of fungus-specific microsatellite markers in the lichen-forming fungus Parmelina carporrhizans (Parmeliaceae).

Appl Plant Sci 2014 Dec 20;2(12). Epub 2014 Nov 20.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Plaza de Ramón y Cajal s/n, Madrid 28040, Spain.

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http://doi.wiley.com/10.3732/apps.1400081
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http://dx.doi.org/10.3732/apps.1400081DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4259457PMC
December 2014

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Authors:
Conrad L Schoch Barbara Robbertse Vincent Robert Duong Vu Gianluigi Cardinali Laszlo Irinyi Wieland Meyer R Henrik Nilsson Karen Hughes Andrew N Miller Paul M Kirk Kessy Abarenkov M Catherine Aime Hiran A Ariyawansa Martin Bidartondo Teun Boekhout Bart Buyck Qing Cai Jie Chen Ana Crespo Pedro W Crous Ulrike Damm Z Wilhelm De Beer Bryn T M Dentinger Pradeep K Divakar Margarita Dueñas Nicolas Feau Katerina Fliegerova Miguel A García Zai-Wei Ge Gareth W Griffith Johannes Z Groenewald Marizeth Groenewald Martin Grube Marieka Gryzenhout Cécile Gueidan Liangdong Guo Sarah Hambleton Richard Hamelin Karen Hansen Valérie Hofstetter Seung-Beom Hong Jos Houbraken Kevin D Hyde Patrik Inderbitzin Peter R Johnston Samantha C Karunarathna Urmas Kõljalg Gábor M Kovács Ekaphan Kraichak Krisztina Krizsan Cletus P Kurtzman Karl-Henrik Larsson Steven Leavitt Peter M Letcher Kare Liimatainen Jian-Kui Liu D Jean Lodge Janet Jennifer Luangsa-ard H Thorsten Lumbsch Sajeewa S N Maharachchikumbura Dimuthu Manamgoda María P Martín Andrew M Minnis Jean-Marc Moncalvo Giuseppina Mulè Karen K Nakasone Tuula Niskanen Ibai Olariaga Tamás Papp Tamás Petkovits Raquel Pino-Bodas Martha J Powell Huzefa A Raja Dirk Redecker J M Sarmiento-Ramirez Keith A Seifert Bhushan Shrestha Soili Stenroos Benjamin Stielow Sung-Oui Suh Kazuaki Tanaka Leho Tedersoo M Teresa Telleria Dhanushka Udayanga Wendy A Untereiner Javier Diéguez Uribeondo Krishna V Subbarao Csaba Vágvölgyi Cobus Visagie Kerstin Voigt Donald M Walker Bevan S Weir Michael Weiß Nalin N Wijayawardene Michael J Wingfield J P Xu Zhu L Yang Ning Zhang Wen-Ying Zhuang Scott Federhen

Database (Oxford) 2014 30;2014. Epub 2014 Jun 30.

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA, CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD Utrecht, The Netherlands, Department of Pharmaceutical Sciences - Microbiology, Università degli Studi di Perugia, Perugia, Italy, Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Marie Bashir Institute for Infectious Diseases and Biosecurity, Sydney Medical School-Westmead Hospital, The University of Sydney, Westmead Millennium Institute, Westmead, Australia, Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Göteborg, Sweden, Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37920, USA, Illinois Natural History Survey, University of Illinois, 1816 South Oak Street, Champaign, IL 61820, USA, Mycology Section, Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, UK, Natural History Museum, University of Tartu, 46 Vanemuise, 51014 Tartu, Estonia, Purdue University, Department of Botany and Plant Pathology, 915 W. State Street, West Lafayette, IN 47907, USA, Institute of Excellence in Fungal Research, and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand, Imperial College London, Royal Botanic Gardens, Kew TW9 3DS, England, UK, Muséum National d'Histoire Naturelle, Dépt. Systématique et Evolution CP39, UMR7205, 12 Rue Buffon, F-75005 Paris, France, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, P. R. China, Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain, Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany, Department of Microbiology and Plant Pathology, Forestry Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0001, South Africa, Real Jardín Botánico, RJB-CSIC,

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http://dx.doi.org/10.1093/database/bau061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4075928PMC
February 2015

Non-developing ascospores in apothecia of asexually reproducing lichen-forming fungi.

Int Microbiol 2013 Sep;16(3):145-55

Department of Plant Biology and Pathology, Rutgers University, New Brunswick, NJ, USA.

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http://dx.doi.org/10.2436/20.1501.01.189DOI Listing
September 2013

Insights into intrathalline genetic diversity of the cosmopolitan lichen symbiotic green alga Trebouxia decolorans Ahmadjian using microsatellite markers.

Mol Phylogenet Evol 2014 Mar 8;72:54-60. Epub 2014 Jan 8.

Biodiversity and Climate Research Centre (BiK-F), Senckenberg Gesellschaft für Naturforschung, 60325 Frankfurt am Main, Germany; Institute of Ecology, Evolution and Diversity, Goethe Universität, Max-von-Laue-Str. 13, D-60438 Frankfurt, Germany.

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http://dx.doi.org/10.1016/j.ympev.2013.12.010DOI Listing
March 2014

Understanding phenotypical character evolution in parmelioid lichenized fungi (Parmeliaceae, Ascomycota).

PLoS One 2013 29;8(11):e83115. Epub 2013 Nov 29.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0083115PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3843734PMC
August 2014

The sister-group relationships of the largest family of lichenized fungi, Parmeliaceae (Lecanorales, Ascomycota).

Fungal Biol 2013 Oct 13;117(10):715-21. Epub 2013 Aug 13.

Department of Biological Sciences, Institute of Ecology, Evolution and Diversity, Goethe Universität, Max-von-Laue-Str. 13, D-60438 Frankfurt, Germany; Biodiversity and Climate Research Centre (BiK-F), Senckenberg Gesellschaft für Naturforschung, Senckenberganlage 25, D-60325 Frankfurt, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.funbio.2013.08.001DOI Listing
October 2013

The lichen genus parmotrema in South Korea.

Mycobiology 2013 Mar 28;41(1):25-36. Epub 2013 Mar 28.

Korean Lichen Research Institute, Sunchon National University, Suncheon 540-742, Korea.

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https://www.tandfonline.com/doi/full/10.5941/MYCO.2013.41.1.
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http://dx.doi.org/10.5941/MYCO.2013.41.1.25DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3627967PMC
March 2013

Testing the use of ITS rDNA and protein-coding genes in the generic and species delimitation of the lichen genus Usnea (Parmeliaceae, Ascomycota).

Mol Phylogenet Evol 2013 Aug 16;68(2):357-72. Epub 2013 Apr 16.

Conservatoire et Jardin botaniques de la Ville de Genève, CP 60, 1292 Chambésy, Switzerland.

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http://dx.doi.org/10.1016/j.ympev.2013.04.005DOI Listing
August 2013

Diversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events.

Am J Bot 2012 Dec 30;99(12):2014-26. Epub 2012 Nov 30.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain.

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http://dx.doi.org/10.3732/ajb.1200258DOI Listing
December 2012

Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): insights on diversity, distributions, and a comparison of species tree and concatenated topologies.

Mol Phylogenet Evol 2013 Jan 24;66(1):138-52. Epub 2012 Sep 24.

Department of Botany, Field Museum of natural History, 1400 S. Lake Shore Dr, Chicago, IL 60605-2496, USA.

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http://dx.doi.org/10.1016/j.ympev.2012.09.013DOI Listing
January 2013

Remototrachyna, a newly recognized tropical lineage of lichens in the Hypotrachyna clade (Parmeliaceae, Ascomycota), originated in the Indian subcontinent.

Am J Bot 2010 Apr 9;97(4):579-90. Epub 2010 Mar 9.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040 Spain.

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http://dx.doi.org/10.3732/ajb.0900140DOI Listing
April 2010

Genetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation.

Mol Phylogenet Evol 2010 Jul 23;56(1):125-33. Epub 2010 Apr 23.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense, Madrid, Spain.

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http://dx.doi.org/10.1016/j.ympev.2010.04.014DOI Listing
July 2010

Accelerated evolutionary rates in tropical and oceanic parmelioid lichens (Ascomycota).

BMC Evol Biol 2008 Sep 22;8:257. Epub 2008 Sep 22.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain.

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http://dx.doi.org/10.1186/1471-2148-8-257DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2564941PMC
September 2008

Upper cortex anatomy corroborates phylogenetic hypothesis in species of Physconia (Ascomycota, Lecanoromycetes).

Mycol Res 2007 Nov 28;111(Pt 11):1311-20. Epub 2007 Aug 28.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense, Madrid 28040, Spain.

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http://linkinghub.elsevier.com/retrieve/pii/S095375620700193
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http://dx.doi.org/10.1016/j.mycres.2007.08.009DOI Listing
November 2007

Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene.

Mol Phylogenet Evol 2007 Aug 13;44(2):812-24. Epub 2006 Dec 13.

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain.

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http://dx.doi.org/10.1016/j.ympev.2006.11.029DOI Listing
August 2007

Patterns of group I intron presence in nuclear SSU rDNA of the Lichen family Parmeliaceae.

J Mol Evol 2007 Feb 2;64(2):181-95. Epub 2007 Jan 2.

Departamento de Ciencias Ambientales, Universidad Pablo de Olavide, Sevilla, Spain.

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http://dx.doi.org/10.1007/s00239-005-0313-yDOI Listing
February 2007

Phylogenetic significance of morphological characters in the tropical Hypotrachyna clade of parmelioid lichens (Parmeliaceae, Ascomycota).

Mol Phylogenet Evol 2006 Aug 2;40(2):448-58. Epub 2006 May 2.

Departamento de Biologia Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid 28040, Spain.

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http://dx.doi.org/10.1016/j.ympev.2006.03.024DOI Listing
August 2006

Molecular phylogeny of parmotremoid lichens (Ascomycota, Parmeliaceae).

Mycologia 2005 Jan-Feb;97(1):150-9

Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, España.

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http://dx.doi.org/10.3852/mycologia.97.1.150DOI Listing
February 2006

Melanelixia and Melanohalea, two new genera segregated from Melanelia (Parmeliaceae) based on molecular and morphological data.

Mycol Res 2004 Aug;108(Pt 8):873-84

Departamento de Biologia Vegetal II, Facutad de Farmacia, Universidad Complutense, Plaza de Ramón y Cajal, Ciudad Universitaria, Madrid 28040, Spain.

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http://dx.doi.org/10.1017/s0953756204000723DOI Listing
August 2004